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solid #e1e1e1;margin-top:10px;}.msgBodyReplyListTop{border-top:0;}.reply_like_num{float:right;font-size:14px;color:#c7c7c7;}.msgData{margin-top:20px;color:#626262;}.msgData span{font-size:14px;padding-right:15px;}.msgData .likes{float:right;padding-right:0;}.js_text_content p{font-size:18px;}.rich_media_meta_link{font-size:15px;}blockquote {padding-left: 10px;border-left: 3px solid #dbdbdb;color: rgba(0,0,0,0.5);font-size: 15px;padding-top: 4px;margin: 1em 0;}.video_iframe{width:500px;height:400px;}.blockquote_info{color:#b5b5b5;margin-top:10px;}#copyright_logo{color:#bdbdbd;}.rich_media_meta_list{margin-bottom:10px;}.reprint{background:#efefef;border-radius:5px;padding:8px;color:#1f1f1f;}.reprint a{word-break:break-all;}.topic{color:#8e8e8e;background:#f7f7f7;border-radius:5px;padding:10px 8px;}.topic a{padding-right:5px;}.topic p{margin-bottom:5px;}\n<\/style>\n<link href=\"https:\/\/www.juyifx.cn\/config\/css\/wxArticle.css\" rel=\"stylesheet\"\/>\n<\/head><script>\nvar 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rel=\"noopener\">#\u7ed8\u56fe<\/a><\/p>\n<\/div>\n<p data-mpa-powered-by=\"yiban.io\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.18518518518518517\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/1_0CuCiczxXATRA1NT7QsFibQGILBxvQ-1.jpg?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_jpg\/zcicibWZessAx2cF5xxW6pBGPmgTUt8qTlL9RiabvDGL72zZRhzS10IN01ZYt0CuCiczxXATRA1NT7QsFibQGILBxvQ\/640?wx_fmt=jpeg'\" data-type=\"jpeg\" data-w=\"1080\" style=\"font-size: 16px;text-align: center;\" data-recalc-dims=\"1\"><span style=\"color: rgb(62, 62, 62);font-size: 16px;\"><\/span><\/p>\n<section style=\"white-space: normal;\">\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section>\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section>\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;\">\n<section powered-by=\"xiumi.us\" style=\"box-sizing: border-box;\">\n<section style=\"line-height: 1.8;box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<p style=\"white-space: normal;box-sizing: border-box;\"><span style=\"font-size: 16px;\"><\/span><span style=\"font-size: 16px;\"><\/span><\/p>\n<\/section>\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5bf9\u4e8eAdmixture\u8f6f\u4ef6\u751f\u6210\u7684\u9057\u4f20\u7ed3\u6784\u5206\u6790\u7ed3\u679c\u8fdb\u884c\u53ef\u89c6\u5316\u5982\u679c\u53ea\u4f7f\u7528boxplot\u51fd\u6570\uff0c\u4f1a\u6bd4\u8f83\u5355\u8c03\u5982\u4e0b\u56fe<br style=\"box-sizing: border-box;\" \/><\/p>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.5748106\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/2_PqnhPg8sHxq4IwDib2xgmzXk8DIvgg.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6D87wDb7tZmx4H5oxaoFTJb8Z65PqnhPg8sHxq4IwDib2xgmzXk8DIvgg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1056\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5982\u679c\u60f3\u8981\u7ed8\u56fe\u66f4\u8d4f\u5fc3\u60a6\u76ee\u4e00\u4e9b\u53ef\u4ee5\u4f7f\u7528R\u8bed\u8a00pophelper\u5305\uff0c\u6548\u679c\u5982\u4e0b<\/p>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"1.0087719\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/3_acQ7J2xTx29sWssmYyH6GhULFmHGwQ.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6DPcf4jZRFn76sXOo5FsbZGC7OacQ7J2xTx29sWssmYyH6GhULFmHGwQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"684\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"1.4076923\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_Xsl6iaP2uGXbibnTueBtjweKpvI7qg.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6Dq3ibSNfZic3nu5icR4ZO4ntSI2uOKXsl6iaP2uGXbibnTueBtjweKpvI7qg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"650\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5982\u679c\u4e0a\u56fe\u6210\u529f\u5f15\u8d77\u4e86\u4f60\u7684\u6ce8\u610f\uff0c\u90a3\u63a5\u4e0b\u6765\u5c31\u548c\u5c0f\u679c\u4e00\u8d77\u6572\u4ee3\u7801\u5427<\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"c\"><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">rm(<span class=\"code-snippet__built_in\" style=\"box-sizing: border-box;\">list<\/span>=ls());gc();<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">BiocManager::install(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">'pophelper'<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">#\u5b89\u88c5\u4f9d\u8d56\u5305<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">install.packages(c(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"devtools\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"ggplot2\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"gridExtra\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"gtable\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"label.switching\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"tidyr\"<\/span>),dependencies=T)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\" style=\"box-sizing: border-box;\"><span class=\"code-snippet__meta\" style=\"box-sizing: border-box;\"># install pophelper package from GitHub<\/span><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">devtools::install_github(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">'royfrancis\/pophelper'<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">library(pophelper)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">library(data.table)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">options(stringsAsFactors = F)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">alist <- readQ(filetype=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"auto\"<\/span>,<span class=\"code-snippet__built_in\" style=\"box-sizing: border-box;\">list<\/span>.files(path=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"D:\/test\/\"<\/span>, full.names=T))<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">alist<-alignK(alist)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">plotQ(alist,exportpath=getwd(),sortind=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"all\"<\/span> , height = <span class=\"code-snippet__number\" style=\"box-sizing: border-box;\">5<\/span>,<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"> width = <span class=\"code-snippet__number\" style=\"box-sizing: border-box;\">5<\/span>,showyaxis = TRUE,imgtype=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"pdf\"<\/span>,showlegend = TRUE,showdiv = FALSE,outputfilename=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"plotq7\"<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">plotQMultiline(alist,sortind=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"all\"<\/span>,exportpath=getwd())<\/span><\/code><\/pre>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5b8c\u5de5\uff01\uff01<br \/><\/p>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\"><br \/><\/p>\n<\/section>\n<p style=\"margin-bottom: 0px;white-space: normal;box-sizing: border-box;\">\u597d\u4e86\uff0c\u4ee5\u4e0a\u5c31\u662f\u5c0f\u679c\u7684\u5206\u4eab\uff0c\u662f\u4e0d\u662f\u5e72\u8d27\u6ee1\u6ee1\u5462\uff0c\u5c0f\u4f19\u4f34\u5feb\u53bb\u8bd5\u8bd5\u5427\u3002<\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"margin-bottom: 8px;white-space: normal;font-size: 16px;outline: 0px;max-width: 100%;box-sizing: border-box;color: rgb(0, 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{"id":47788,"date":"2024-06-15T20:07:49","date_gmt":"2024-06-15T12:07:49","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=47788"},"modified":"2024-06-15T20:07:49","modified_gmt":"2024-06-15T12:07:49","slug":"r%e8%af%ad%e8%a8%80pophelper%e5%8c%85%e5%af%b9-admixture%e9%81%97%e4%bc%a0%e7%bb%93%e6%9e%84%e5%88%86%e6%9e%90%e5%8f%af%e8%a7%86%e5%8c%96-2","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=47788","title":{"rendered":"R\u8bed\u8a00pophelper\u5305\u5bf9 Admixture\u9057\u4f20\u7ed3\u6784\u5206\u6790\u53ef\u89c6\u5316"},"content":{"rendered":"

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#e7e7eb;}@supports(-webkit-overflow-scrolling:touch){.rich_media_title{font-weight:700}}.rich_media_meta{display:inline-block;vertical-align:middle;padding:0 0 10px 0;font-size:15px;-webkit-tap-highlight-color:rgba(0,0,0,0)}.rich_media_meta.icon_appmsg_tag{margin-right:0px}.rich_media_meta.meta_tag_text{margin-right:0}.rich_media_meta_list em{font-style:normal}.rich_media_meta_text{color:#a5a5a5;}p{margin:0;}.msgBox{margin-top:20px;padding-top:20px;padding-left:50px;overflow:hidden;border-top:2px dashed #09a2ff;}.msg{padding-top:7px;clear:both;}.msgBody{float:right;width:100%;margin-left:55px;padding-bottom:15px;border-bottom:1px dashed #e0e0e0;}.userHeadImg{float:left;margin-left:-50px;}.userHeadImg img{width:40px;height:40px;margin-right:10px;border-radius:3px;}.userName{color:#888888;line-height:24px;font-size:14px;margin:5px 0 5px 0;height:24px;}.replyBody,.autherBody{color:#565656;font-size:15px;}.replyIcon{border-left:4px solid 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Mono\",Menlo,Courier,monospace}.code-snippet__comment,.code-snippet__quote{color:#afafaf;font-style:italic}.code-snippet__keyword,.code-snippet__selector-tag,.code-snippet__subst{color:#ca7d37}.code-snippet__number,.code-snippet__literal,.code-snippet__variable,.code-snippet__template-variable,.code-snippet__tag .code-snippet__attr{color:#0e9ce5}.code-snippet__string,.code-snippet__doctag{color:#d14}.code-snippet__title,.code-snippet__section,.code-snippet__selector-id{color:#d14}.code-snippet__subst{font-weight:normal}.code-snippet__type,.code-snippet__class 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0;align-items:center}.flex_bd{padding-left:14px;}.account_nickname{display:inline-block;vertical-align:middle;line-height:1.2;color:#576b95;font-size:14px}.account_desc{overflow:hidden;text-overflow:ellipsis;display:-webkit-box;-webkit-box-orient:vertical;-webkit-line-clamp:1;color:rgba(0,0,0,0.3);font-size:14px;line-height:1.2;padding-top:.4em}.msg_source_url{text-align:left;word-break:break-all;margin-top:20px;}.msg_source_url a{padding-right:10px;}.msg_source_url .url_text{color:#a8a8a8;}.video-desc{font-size:14px;margin-top:15px;color:#6c6c6c;}.msg_source_url{text-align:left;}.original_primary_card_tips{color:rgba(0,0,0,0.3);line-height:1.4;font-size:15px;}.weui-flex__item{margin-bottom:20px;padding:20px 16px;margin-top:16px;line-height:1.4;align-items:center;background-color:#f7f7f7;border-radius:8px;position:relative;}.original_primary_desc{color:rgba(0,0,0,0.5);font-size:14px;padding-top:4px;width:auto;overflow:hidden;text-overflow:ellipsis;}.msgBodyReplyList{border-top:1px solid #e1e1e1;margin-top:10px;}.msgBodyReplyListTop{border-top:0;}.reply_like_num{float:right;font-size:14px;color:#c7c7c7;}.msgData{margin-top:20px;color:#626262;}.msgData span{font-size:14px;padding-right:15px;}.msgData .likes{float:right;padding-right:0;}.js_text_content p{font-size:18px;}.rich_media_meta_link{font-size:15px;}blockquote {padding-left: 10px;border-left: 3px solid #dbdbdb;color: rgba(0,0,0,0.5);font-size: 15px;padding-top: 4px;margin: 1em 0;}.video_iframe{width:500px;height:400px;}.blockquote_info{color:#b5b5b5;margin-top:10px;}#copyright_logo{color:#bdbdbd;}.rich_media_meta_list{margin-bottom:10px;}.reprint{background:#efefef;border-radius:5px;padding:8px;color:#1f1f1f;}.reprint a{word-break:break-all;}.topic{color:#8e8e8e;background:#f7f7f7;border-radius:5px;padding:10px 8px;}.topic a{padding-right:5px;}.topic p{margin-bottom:5px;}\n<\/style>\n<link href=\"https:\/\/www.juyifx.cn\/config\/css\/wxArticle.css\" rel=\"stylesheet\"\/>\n<\/head><script>\nvar 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rel=\"noopener\">#\u7ed8\u56fe<\/a><\/p>\n<\/div>\n<p data-mpa-powered-by=\"yiban.io\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.18518518518518517\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/1_0CuCiczxXATRA1NT7QsFibQGILBxvQ-1.jpg?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_jpg\/zcicibWZessAx2cF5xxW6pBGPmgTUt8qTlL9RiabvDGL72zZRhzS10IN01ZYt0CuCiczxXATRA1NT7QsFibQGILBxvQ\/640?wx_fmt=jpeg'\" data-type=\"jpeg\" data-w=\"1080\" style=\"font-size: 16px;text-align: center;\" data-recalc-dims=\"1\"><span style=\"color: rgb(62, 62, 62);font-size: 16px;\"><\/span><\/p>\n<section style=\"white-space: normal;\">\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section>\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section>\n<section style=\"box-sizing: border-box;max-width: 100%;\">\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;\">\n<section powered-by=\"xiumi.us\" style=\"box-sizing: border-box;\">\n<section style=\"line-height: 1.8;box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<section style=\"box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<p style=\"white-space: normal;box-sizing: border-box;\"><span style=\"font-size: 16px;\"><\/span><span style=\"font-size: 16px;\"><\/span><\/p>\n<\/section>\n<section style=\"box-sizing: border-box;font-size: 16px;\">\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5bf9\u4e8eAdmixture\u8f6f\u4ef6\u751f\u6210\u7684\u9057\u4f20\u7ed3\u6784\u5206\u6790\u7ed3\u679c\u8fdb\u884c\u53ef\u89c6\u5316\u5982\u679c\u53ea\u4f7f\u7528boxplot\u51fd\u6570\uff0c\u4f1a\u6bd4\u8f83\u5355\u8c03\u5982\u4e0b\u56fe<br style=\"box-sizing: border-box;\" \/><\/p>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.5748106\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/2_PqnhPg8sHxq4IwDib2xgmzXk8DIvgg.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6D87wDb7tZmx4H5oxaoFTJb8Z65PqnhPg8sHxq4IwDib2xgmzXk8DIvgg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1056\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5982\u679c\u60f3\u8981\u7ed8\u56fe\u66f4\u8d4f\u5fc3\u60a6\u76ee\u4e00\u4e9b\u53ef\u4ee5\u4f7f\u7528R\u8bed\u8a00pophelper\u5305\uff0c\u6548\u679c\u5982\u4e0b<\/p>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"1.0087719\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/3_acQ7J2xTx29sWssmYyH6GhULFmHGwQ.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6DPcf4jZRFn76sXOo5FsbZGC7OacQ7J2xTx29sWssmYyH6GhULFmHGwQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"684\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;box-sizing: border-box;\" powered-by=\"xiumi.us\">\n<section style=\"max-width: 100%;vertical-align: middle;display: inline-block;line-height: 0;box-sizing: border-box;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"1.4076923\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_Xsl6iaP2uGXbibnTueBtjweKpvI7qg.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/mmbiz_png\/zcicibWZessAyB69UyXDLG0wQcISNwmL6Dq3ibSNfZic3nu5icR4ZO4ntSI2uOKXsl6iaP2uGXbibnTueBtjweKpvI7qg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"650\" style=\"vertical-align: middle;width: 100%;box-sizing: border-box;\" data-recalc-dims=\"1\"><\/section>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5982\u679c\u4e0a\u56fe\u6210\u529f\u5f15\u8d77\u4e86\u4f60\u7684\u6ce8\u610f\uff0c\u90a3\u63a5\u4e0b\u6765\u5c31\u548c\u5c0f\u679c\u4e00\u8d77\u6572\u4ee3\u7801\u5427<\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"c\"><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">rm(<span class=\"code-snippet__built_in\" style=\"box-sizing: border-box;\">list<\/span>=ls());gc();<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">BiocManager::install(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">'pophelper'<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">#\u5b89\u88c5\u4f9d\u8d56\u5305<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">install.packages(c(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"devtools\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"ggplot2\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"gridExtra\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"gtable\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"label.switching\"<\/span>,<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"tidyr\"<\/span>),dependencies=T)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\" style=\"box-sizing: border-box;\"><span class=\"code-snippet__meta\" style=\"box-sizing: border-box;\"># install pophelper package from GitHub<\/span><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">devtools::install_github(<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">'royfrancis\/pophelper'<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">library(pophelper)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">library(data.table)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">options(stringsAsFactors = F)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">alist <- readQ(filetype=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"auto\"<\/span>,<span class=\"code-snippet__built_in\" style=\"box-sizing: border-box;\">list<\/span>.files(path=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"D:\/test\/\"<\/span>, full.names=T))<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">alist<-alignK(alist)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">plotQ(alist,exportpath=getwd(),sortind=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"all\"<\/span> , height = <span class=\"code-snippet__number\" style=\"box-sizing: border-box;\">5<\/span>,<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"> width = <span class=\"code-snippet__number\" style=\"box-sizing: border-box;\">5<\/span>,showyaxis = TRUE,imgtype=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"pdf\"<\/span>,showlegend = TRUE,showdiv = FALSE,outputfilename=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"plotq7\"<\/span>)<\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code style=\"box-sizing: border-box;\"><span class=\"code-snippet_outer\">plotQMultiline(alist,sortind=<span class=\"code-snippet__string\" style=\"box-sizing: border-box;\">\"all\"<\/span>,exportpath=getwd())<\/span><\/code><\/pre>\n<\/section>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\">\u5b8c\u5de5\uff01\uff01<br \/><\/p>\n<p style=\"white-space: normal;box-sizing: border-box;\" powered-by=\"xiumi.us\"><br \/><\/p>\n<\/section>\n<p style=\"margin-bottom: 0px;white-space: normal;box-sizing: border-box;\">\u597d\u4e86\uff0c\u4ee5\u4e0a\u5c31\u662f\u5c0f\u679c\u7684\u5206\u4eab\uff0c\u662f\u4e0d\u662f\u5e72\u8d27\u6ee1\u6ee1\u5462\uff0c\u5c0f\u4f19\u4f34\u5feb\u53bb\u8bd5\u8bd5\u5427\u3002<\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"margin-bottom: 8px;white-space: normal;font-size: 16px;outline: 0px;max-width: 100%;box-sizing: border-box;color: rgb(0, 0, 0);font-family: system-ui, -apple-system, BlinkMacSystemFont, "Helvetica Neue", "PingFang SC", "Hiragino Sans GB", "Microsoft YaHei UI", "Microsoft YaHei", Arial, sans-serif;letter-spacing: 0.544px;background-color: rgb(255, 255, 255);overflow-wrap: break-word !important;\">\n<section powered-by=\"xiumi.us\" style=\"margin-top: 10px;margin-bottom: 10px;outline: 0px;max-width: 100%;box-sizing: border-box;text-align: left;justify-content: flex-start;display: flex;flex-flow: row nowrap;overflow-wrap: break-word !important;\">\n<section style=\"padding-right: 5px;outline: 0px;max-width: 100%;box-sizing: border-box;display: inline-block;vertical-align: middle;width: auto;align-self: center;flex: 0 0 auto;min-width: 5%;height: auto;line-height: 0;overflow-wrap: break-word !important;\">\n<section powered-by=\"xiumi.us\" style=\"outline: 0px;max-width: 100%;box-sizing: border-box;transform: perspective(0px);transform-style: flat;overflow-wrap: break-word !important;\">\n<section 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