{"id":53676,"date":"2024-06-16T13:05:53","date_gmt":"2024-06-16T05:05:53","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=53676"},"modified":"2024-06-16T13:05:53","modified_gmt":"2024-06-16T05:05:53","slug":"%e8%82%bf%e7%98%a4%e7%94%9f%e4%bf%a1%e6%96%87%e7%ab%a0%e5%bf%85%e5%a4%87%e5%88%86%e6%9e%90%e5%86%85%e5%ae%b9-%e4%ba%9a%e5%9e%8b%e7%94%9f%e5%ad%98%e4%b8%8e%e4%b8%b4%e5%ba%8a%e7%9b%b8%e5%85%b3%e6%80%a7","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=53676","title":{"rendered":"\u80bf\u7624\u751f\u4fe1\u6587\u7ae0\u5fc5\u5907\u5206\u6790\u5185\u5bb9-\u4e9a\u578b\u751f\u5b58\u4e0e\u4e34\u5e8a\u76f8\u5173\u6027\u5206\u6790"},"content":{"rendered":"


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href=\"https:\/\/mp.weixin.qq.com\/mp\/appmsgalbum?__biz=Mzg3OTg3MjQyNg==&action=getalbum&album_id=2664545260517294084#wechat_redirect\" title=\"\u751f\u4fe1\u5b9e\u64cd\" target=\"_blank\" rel=\"noopener\">#\u751f\u4fe1\u5b9e\u64cd<\/a><\/p>\n<\/div>\n<section data-mpa-powered-by=\"yiban.io\">\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section powered-by=\"xiumi.us\">\n<section>\n<p><span style=\"font-size: 14px;letter-spacing: 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0.034em;\">\u8fd9\u5c31\u662f\u5c0f\u679c\u4eca\u5929\u5e26\u6765\u7684\u5185\u5bb9\uff0c\u5728\u80bf\u7624\u751f\u4fe1\u6587\u7ae0\u4e2d\u4e9a\u578b\u76f8\u5173\u5206\u6790\u51fa\u73b0\u7684\u9891\u7387\u975e\u5e38\u9ad8\uff0c\u7070\u5e38\u503c\u5f97\u5c0f\u4f19\u4f34\u5b66\u4e60\u54c8\uff0c\u63a5\u4e0b\u6765\u8ddf\u7740\u5c0f\u679c\u5f00\u59cb\u4eca\u5929\u7684\u5b66\u4e60\u5427\uff01<\/span><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><br \/><\/span><\/p>\n<h2 style=\"text-align: center;\"><\/h2>\n<p style=\"text-align: center;\"><span style=\"font-size: 20px;\"><em><strong><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\">1.<\/span><\/strong><\/em><em><strong><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\">\u5982\u4f55\u8fdb\u884c\u4e9a\u578b\u751f\u5b58\u4e0e\u4e34\u5e8a\u76f8\u5173\u6027\u5206\u6790\uff1f<\/span><\/strong><\/em><\/span><\/p>\n<p style=\"text-align: center;\"><span style=\"mso-spacerun:"yes";font-family:\u5b8b\u4f53;mso-ascii-font-family:Calibri;mso-hansi-font-family:Calibri;mso-bidi-font-family:"Times New Roman";font-size:10.5000pt;mso-font-kerning:1.0000pt;\"><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 14px;\">\u5982\u4f55\u8fdb\u884c\u4e9a\u578b\u751f\u5b58\u4e0e\u4e34\u5e8a\u76f8\u5173\u6027\u5206\u6790\uff1f\u5c0f\u679c\u6765\u4e3a\u5c0f\u4f19\u4f34\u505a\u4e00\u54c8\u7b80\u5355\u4ecb\u7ecd\uff0c\u5728\u8fdb\u884c\u8be5\u5206\u6790\u4e4b\u524d\uff0c\u9996\u5148\u5229\u7528ConsensusClusterPlus\u5bf9\u80bf\u7624\u6837\u672c\u8fdb\u884c\u65e0\u76d1\u7763\u805a\u7c7b\u5206\u6790\uff0c\u83b7\u5f97\u4e9a\u578b\u5206\u7ec4\u4fe1\u606f\uff0c\u7136\u540e\u8fdb\u884c\u4e0d\u540c\u4e9a\u578b\u4e4b\u95f4\u9884\u540e\u76f8\u5173\u6027\u5206\u6790\uff0c\u4e9a\u578b\u4e0e\u6837\u672c\u7684\u4e34\u5e8a\u56e0\u7d20\u76f8\u5173\u6027\u5206\u6790\uff0c\u8fd9\u5c31\u662f\u5927\u6982\u7684\u5206\u6790\u6b65\u9aa4\uff0c\u5176\u5b9e\u5f88\u7b80\u5355\uff0c\u975e\u5e38\u9002\u5408\u5c0f\u767d\uff0c\u6709\u9700\u8981\u7684\u5c0f\u4f19\u4f34\u9a6c\u4e0a\u8ddf\u7740\u5c0f\u679c\u5f00\u59cb\u4eca\u5929\u7684\u5b9e\u64cd\u5427\uff01<\/span><\/p>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.3888888888888889\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/1_IlmBAWe69EMUPMhNEgrv6NXX85lJxg-9.jpg?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_jpg\/zcicibWZessAwyrj7kbUR3ULG9ZUbLrLkgibzL8qUpQROfe8ebc3gNSnu1dIlmBAWe69EMUPMhNEgrv6NXX85lJxg\/640?wx_fmt=jpeg&wxfrom=5&wx_lazy=1&wx_co=1'\" data-w=\"1080\" data-recalc-dims=\"1\" \/><\/p>\n<p style=\"text-align: center;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><em><strong>3.\u8bfb\u53d6\u8f93\u5165\u6570\u636e<\/strong><\/em><\/span><span style=\"mso-spacerun:'yes';font-family:\u5b8b\u4f53;mso-ascii-font-family:Calibri;mso-hansi-font-family:Calibri;mso-bidi-font-family:'Times New Roman';font-size:10.5000pt;mso-font-kerning:1.0000pt;\"><o:p><\/o:p><\/span><\/p>\n<h2 style=\"text-align: center;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 14px;\"><o:p><\/o:p><\/span><\/h2>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"ini\"><code><span class=\"code-snippet_outer\">#\u57fa\u56e0\u8868\u8fbe\u77e9\u9635\uff0c\u884c\u540d\u4e3a\u57fa\u56e0\u540d\uff0c\u5217\u540d\u4e3a\u6837\u672c\u4fe1\u606f\u3002<\/span><\/code><code><span class=\"code-snippet_outer\">rt=read.table(\"\u70ed\u56fe1.txt\",header=T,sep=\"t\",row.names=1,check.names=F)<\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.1777456647398844\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/2_9pkS79ic2PNxxeuycPuAMOOCEemLYw-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecdricmsRwbMXe2Ovq5qiaGFOXGyJb9pkS79ic2PNxxeuycPuAMOOCEemLYw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"692\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"ini\"><code><span class=\"code-snippet_outer\">#\u4e34\u5e8a\u4fe1\u606f\u548c\u4e9a\u578b\u5206\u7ec4\u4fe1\u606f\u6587\u4ef6\uff0c\u884c\u540d\u4e3a\u6837\u672c\u4fe1\u606f\u6587\u4ef6\uff0c\u7b2c\u4e00\u5217\u4e3a\u4e9a\u578b\u5206\u7ec4\u4fe1\u606f\uff0c\u5176\u4ed6\u5217\u4e3a\u4e34\u5e8a\u56e0\u5b50\u4fe1\u606f\u3002<\/span><\/code><code><span class=\"code-snippet_outer\">ann=read.table(\"\u70ed\u56fe2.txt\",header=T,sep=\"t\",row.names=1,check.names=F)<\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.3569364161849711\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/3_gfngMF5HdzYrRSd5T4IfCUy9mQbuTA-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecdpJZ6GweOZ7riaqckZ8LFqVdp5gfngMF5HdzYrRSd5T4IfCUy9mQbuTA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"692\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p style=\"margin-left: 0pt;\"><span style=\"font-family:'Times New Roman';mso-fareast-font-family:\u5b8b\u4f53;color:rgb(0,0,0);font-size:10.5000pt;mso-font-kerning:1.0000pt;\"><br \/><\/span><\/p>\n<p style=\"margin-left: 0pt;text-align: center;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><strong><span style=\"font-size: 20px;\"><em><span style=\"color: rgb(0, 0, 0);\">4.\u4e0d\u540c\u4e9a\u578b\u4e4b\u95f4\u751f\u5b58\u9884\u540e\u76f8\u5173\u6027\u5206\u6790\uff0c\u4ee5\u53ca\u7ed8\u5236KM\u66f2\u7ebf<\/span><\/em><\/span><\/strong><\/span><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"makefile\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">#\u884c\u540d\u4e3a\u6837\u672c\u540d\uff0c\u5217\u540d\u4e3a\u751f\u5b58\u65f6\u95f4\uff0c\u751f\u5b58\u72b6\u6001\u548c\u4e9a\u578b\u5206\u7ec4\u4fe1\u606f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">tmp <- read.table(file = <span class=\"code-snippet__string\">\"km.txt\"<\/span>,<span class=\"code-snippet__comment\">#\u5de5\u4f5c\u76ee\u5f55\u4e0b\u7684\u6587\u4ef6\u540d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">header = T,<span class=\"code-snippet__comment\">#\u8bbe\u7f6e\u5217\u540d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">sep = <span class=\"code-snippet__string\">\"t\"<\/span>,<span class=\"code-snippet__comment\">#\u5206\u9694\u7b26<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">row.names = 1)<span class=\"code-snippet__comment\">#\u8bbe\u7f6e\u884c\u540dCluster<\/span><\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.31213872832369943\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_ISde2l6bk6kRZQzbeTyZWgzQCnibMQ-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecdLRBkTJYZfH4RTV6CoicohbBnAhISde2l6bk6kRZQzbeTyZWgzQCnibMQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"692\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"nginx\"><code><span class=\"code-snippet_outer\">fit <- survfit(Surv(time,status) ~ Cluster,data = tmp)<\/span><\/code><code><span class=\"code-snippet_outer\">#\u8bbe\u7f6e\u4e3b\u9898<\/span><\/code><code><span class=\"code-snippet_outer\">mytheme <- theme_survminer(font.legend = c(14,\"plain\", \"black\"),<\/span><\/code><code><span class=\"code-snippet_outer\"> font.x = c(14,\"plain\", \"black\"),<\/span><\/code><code><span class=\"code-snippet_outer\"> font.y = c(14,\"plain\", \"black\"))<\/span><\/code><code><span class=\"code-snippet_outer\">#\u7ed8\u5236KM\u66f2\u7ebf<\/span><\/code><code><span class=\"code-snippet_outer\">pdf(\"KM.pdf\",height=7,width=7)<\/span><\/code><code><span class=\"code-snippet_outer\">ggsurvplot(fit,<\/span><\/code><code><span class=\"code-snippet_outer\"> palette= c(pal_nejm()(2),'#F7A20B'),#pal_nejm()(2)\u6570\u5b57\u662f2\u4ee3\u88683\u7ec4<\/span><\/code><code><span class=\"code-snippet_outer\"> conf.int=FALSE,size=1.3,<\/span><\/code><code><span class=\"code-snippet_outer\"> pval=T,pval.method = T,<\/span><\/code><code><span class=\"code-snippet_outer\"> legend.labs=c(\"C1\",\"C2\",\"C3\"), <\/span><\/code><code><span class=\"code-snippet_outer\"> legend.title=\"Cluster\",<\/span><\/code><code><span class=\"code-snippet_outer\"> xlab=\"Time (years)\",<\/span><\/code><code><span class=\"code-snippet_outer\"> ylab='Survival probability',<\/span><\/code><code><span class=\"code-snippet_outer\"> risk.table=TRUE,<\/span><\/code><code><span class=\"code-snippet_outer\"> break.time.by = 2,<\/span><\/code><code><span class=\"code-snippet_outer\"> risk.table.title=\"Number at risk\",<\/span><\/code><code><span class=\"code-snippet_outer\"> risk.table.height=.4,<\/span><\/code><code><span class=\"code-snippet_outer\"> risk.table.y.text = FALSE,<\/span><\/code><code><span class=\"code-snippet_outer\"> surv.median.line = \"hv\",<\/span><\/code><code><span class=\"code-snippet_outer\"> ggtheme = mytheme)<\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\">dev.off()<\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.9964601769911504\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/5_KfADUVZlCvibbgnZU92Sia6aw8UlCA-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecd9jhxUVTzsSrsLIRjY0RUcRiaJYjKfADUVZlCvibbgnZU92Sia6aw8UlCA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"565\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p style=\"text-align: center;\"><br \/><\/p>\n<p style=\"text-align: center;\"><br \/><\/p>\n<p style=\"text-align: center;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><em><strong>5.<span style=\"background: rgb(255, 255, 255);\">\u4e9a\u578b\u4e0e\u6837\u672c\u7684\u4e34\u5e8a\u56e0\u7d20\u8fdb\u884c\u4e86\u76f8\u5173\u6027\u5206\u6790<\/span><\/strong><\/em><\/span><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"perl\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">#\u5236\u4f5c\u57fa\u7ebf\u8868\uff0c\u4ee5Cluster\u4e9a\u578b\u8fdb\u884c\u5206\u7ec4<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">table1<-gaze(Cluster~.,ann)%>%myft()<\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">#\u5bfc\u51faword\u6587\u4ef6,\u5728\u5f53\u524d\u76ee\u5f55\u751f\u6210Report.doc<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">table2docx(table1)<\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.6488439306358381\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/6_hTib1HSaZITnNUwa5ucNINulc4ZdGw-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecdokicnJicL99S8KPMIw3z6gUvV2LhTib1HSaZITnNUwa5ucNINulc4ZdGw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"692\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p style=\"text-align: center;\"><em style=\"letter-spacing: 0.578px;text-align: center;text-wrap: wrap;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><strong><br \/><\/strong><\/em><\/p>\n<p style=\"text-align: center;\"><em style=\"letter-spacing: 0.578px;text-align: center;text-wrap: wrap;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><strong>6<span style=\"letter-spacing: 0.034em;\">.<\/span><\/strong><\/em><em style=\"text-align: center;text-wrap: wrap;letter-spacing: 0.034em;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><strong>\u57fa\u56e0\u8868\u8fbe\u6c34\u5e73\u5728\u4e9a\u578b\u6837\u672c\u4e2d\u7684\u5206\u5e03\u8fdb\u884c\u70ed\u56fe\u7ed8\u5236<\/strong><\/em><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"objectivec\"><code><span class=\"code-snippet_outer\">pdf(file=<span class=\"code-snippet__string\">\"heatmap.pdf\"<\/span>,width=<span class=\"code-snippet__number\">8<\/span>,height=<span class=\"code-snippet__number\">7<\/span>)<\/span><\/code><code><span class=\"code-snippet_outer\">pheatmap(rt,<\/span><\/code><code><span class=\"code-snippet_outer\"> annotation=ann,<\/span><\/code><code><span class=\"code-snippet_outer\"> cluster_cols = F,<\/span><\/code><code><span class=\"code-snippet_outer\"> cluster_rows = T,<\/span><\/code><code><span class=\"code-snippet_outer\"> color = colorRampPalette(c(<span class=\"code-snippet__string\">\"CornflowerBlue\"<\/span>, <span class=\"code-snippet__string\">\"white\"<\/span>, <span class=\"code-snippet__string\">\"Salmon\"<\/span>))(<span class=\"code-snippet__number\">50<\/span>),<\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__meta\">#color = colorRampPalette(c(<span class=\"code-snippet__meta-string\">\"CornflowerBlue\"<\/span>, <span class=\"code-snippet__meta-string\">\"white\"<\/span>, <span class=\"code-snippet__meta-string\">\"Salmon\"<\/span>))(50),<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> show_colnames = F,<\/span><\/code><code><span class=\"code-snippet_outer\"> scale=<span class=\"code-snippet__string\">\"row\"<\/span>, <span class=\"code-snippet__meta\">#\u77eb\u6b63row<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__meta\">#border_color =<span class=\"code-snippet__meta-string\">\"NA\"<\/span>,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> fontsize = <span class=\"code-snippet__number\">8<\/span>,<\/span><\/code><code><span class=\"code-snippet_outer\"> fontsize_row=<span class=\"code-snippet__number\">7.5<\/span>,<\/span><\/code><code><span class=\"code-snippet_outer\"> fontsize_col=<span class=\"code-snippet__number\">6<\/span>)<\/span><\/code><code><span class=\"code-snippet_outer\">dev.off()<\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><\/pre>\n<\/section>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.8767334360554699\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/7_3wcHgQHWJ2hGxzqFAxNjGoBc3Fvabg-9.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyBMiaebYV0wRXKtNfxorecdTO2piaTDDvicKJ0gYECDkorQibN3wcHgQHWJ2hGxzqFAxNjGoBc3Fvabg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"649\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p style=\"margin-left: 0pt;text-align: center;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 20px;\"><em><strong><br \/><\/strong><\/em><\/span><\/p>\n<p style=\"text-align: justify;\"><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 14px;\">\u4eca\u5929\u5c0f\u679c\u987a\u5229\u7684\u5b8c\u6210\u4e86\u4e9a\u578b\u7684\u751f\u5b58\u4e0e\u4e34\u5e8a\u76f8\u5173\u6027\u5206\u6790\uff0c<\/span><span style=\"color: rgb(0, 0, 0);font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 14px;letter-spacing: 0.578px;\">\u60f3\u8981\u7ee7\u7eed\u4e86\u89e3\u5176\u4ed6\u5185\u5bb9\u7684\u53ef\u4ee5\u6301\u7eed\u5173\u6ce8\u5c0f\u679c\u54e6\uff5e\uff5e\u6216\u8005\u4e5f\u53ef\u4ee5\u5173\u6ce8\u6211\u4eec\u7684\u5b98\u7f51\u4e5f\u4f1a\u6301\u7eed\u66f4\u65b0\u7684\u54e6\uff5e <\/span><\/p>\n<section powered-by=\"xiumi.us\" style=\"margin-bottom: 0px;font-size: 16px;letter-spacing: 0.578px;white-space: normal;\">\n<section style=\"letter-spacing: 0.578px;\">\n<section powered-by=\"xiumi.us\" style=\"margin: 10px;text-align: left;justify-content: flex-start;display: flex;flex-flow: row;\">\n<section style=\"padding-right: 10px;padding-left: 10px;display: inline-block;width: 558px;vertical-align: top;border-style: dashed;border-width: 1px;border-color: rgb(62, 62, 62);align-self: flex-start;flex: 0 0 auto;\">\n<section powered-by=\"xiumi.us\" style=\"margin-top: 10px;margin-bottom: 10px;\">\n<section style=\"display: inline-block;width: 536px;border-width: 0px 0px 0px 10px;border-style: solid;border-left-color: rgb(144, 215, 236);border-right-color: rgb(46, 172, 109);box-shadow: rgb(0, 0, 0) 0px 0px 0px;border-bottom-left-radius: 0px;\">\n<section powered-by=\"xiumi.us\" style=\"padding-right: 3px;padding-left: 3px;\">\n<section style=\"margin-top: 0.95em;margin-bottom: -0.65em;display: inline-block;width: 520px;vertical-align: top;\">\n<section style=\"width: 520px;\">\n<section style=\"border-top: 1px solid rgb(0, 0, 0);width: 519.479px;float: left;\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<section style=\"margin-top: -3px;width: 6px;height: 6px;border-radius: 100%;float: right;background-color: rgb(46, 172, 109);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<section style=\"margin-top: -1em;padding: 3px 10px;display: inline-block;vertical-align: top;background-color: rgb(255, 255, 255);color: rgb(0, 154, 68);\">\n<p><strong>\u5f80\u671f\u63a8\u8350<\/strong><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section powered-by=\"xiumi.us\" style=\"text-align: justify;\">\n<section style=\"letter-spacing: 0.578px;line-height: 1.75em;\"><a target=\"_blank\" href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg3OTg3MjQyNg==&mid=2247491794&idx=1&sn=2b7a4de95169c79202e44813885a8250&chksm=cf7f7017f808f9015689839fe4057fd418bf7b20eb1dfb5a28cd92e56a41b5605e62bfbc16fb&scene=21#wechat_redirect\" textvalue=\"1.\u642d\u5efa\u751f\u4fe1\u5206\u6790\u6d41\u6c34\u7ebf\uff0c\u5982\u5de5\u5382\u4e00\u683724\u5c0f\u65f6\u8fd0\u8f6cSnakemake\u2014\u2014\u8fdb\u9636\u547d\u4ee4\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"2\" rel=\"noopener\">1.\u642d\u5efa\u751f\u4fe1\u5206\u6790\u6d41\u6c34\u7ebf\uff0c\u5982\u5de5\u5382\u4e00\u683724\u5c0f\u65f6\u8fd0\u8f6cSnakemake\u2014\u2014\u8fdb\u9636\u547d\u4ee4<\/a><br 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