{"id":56721,"date":"2024-06-16T18:17:32","date_gmt":"2024-06-16T10:17:32","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=56721"},"modified":"2024-06-16T18:17:32","modified_gmt":"2024-06-16T10:17:32","slug":"%e4%bb%8estring%e5%88%b0cytoscape%ef%bc%8c%e5%b0%8f%e6%9e%9c%e5%b8%a6%e4%bd%a0%e7%9c%8bppi%e7%bd%91%e7%bb%9c%e7%9a%84%e6%9e%84%e5%bb%ba","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=56721","title":{"rendered":"\u4eceSTRING\u5230Cytoscape\uff0c\u5c0f\u679c\u5e26\u4f60\u770bPPI\u7f51\u7edc\u7684\u6784\u5efa"},"content":{"rendered":"


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16px;\">\u7136\u540e\u8fdb\u5165\u8fd9\u4e2a\u754c\u9762\uff0c\u4e3b\u8981\u662f\u786e\u8ba4\u4e00\u4e0b\u8f93\u5165\u7684\u86cb\u767d\u540d\uff0c\u6709\u7684\u53ef\u80fd\u5728\u5e93\u91cc\u6ca1\u6709\uff0c\u6216\u8005\u9700\u8981\u6362\u6210\u5176\u4ed6\u7684\u540d\u5b57\uff0c\u6ca1\u6709\u95ee\u9898\u5c31\u7ee7\u7eed\u4e86\uff0ccountinue\u3002<\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_IWicymEetCc6Enf2BkUE4Yz1Ya5e5w-4.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyuYsqlJnQUJvnS2iciaDibtfbdV0VmHlriaSjYwjFPLp1BLjokHIWicymEetCc6Enf2BkUE4Yz1Ya5e5w\/640?wx_fmt=png&wxfrom=5&wx_lazy=1&wx_co=1'\" data-ratio=\"0.38981481481481484\" data-w=\"1080\" data-imgfileid=\"100014949\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u4e4b\u540e\u5c31\u662f\u7ed3\u679c\u9875\u9762\u4e86\uff0c\u8fd9\u4e2a\u9875\u9762\u4e3b\u8981\u8bf4\u4e24\u70b9\uff0c\u4e00\u70b9\u662fsettings\uff0c\u8fd9\u4e2a\u662f\u7528\u6765\u8bbe\u7f6e\u7684\u3002<\/span><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014931\" data-ratio=\"0.45124282982791586\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/5_Q5P1dULBLd4ibWRibmFxicBYiapWSA.png?resize=553%2C249\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0MhD6krEKjCXNiaXWPpTcIZrmNicEVrQ5P1dULBLd4ibWRibmFxicBYiapWSA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1046\" height=\"249 .8699951171875\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u4e3b\u8981\u662fminimum required interaction score\u8fd9\u4e2a\u9009\u9879\uff0c\u8fd9\u4e2a\u63a7\u5236\u7684\u662f\u76f8\u5173\u6027\u5206\u6570\uff0c\u86cb\u767d\u548c\u86cb\u767d\u4e4b\u95f4\u4f1a\u8ba1\u7b97\u4e00\u4e2a\u76f8\u4e92\u4f5c\u7528\u7684\u5206\u6570\uff0c\u8fd9\u91cc\u53ef\u4ee5\u8bbe\u7f6e\u9608\u503c\uff0c\u8fbe\u5230\u9608\u503c\u4e4b\u540e\u624d\u4f1a\u7528\u7ebf\u94fe\u63a5\uff0c\u5206\u6570\u4e00\u822c\u67090.15\uff0c0.4\uff0c0.7\uff0c0.9\u8fd9\u51e0\u4e2a\u6321\u4f4d\uff0c\u5982\u679c\u7f51\u7edc\u91cc\u7ebf\u592a\u5c11\u53ef\u4ee5\u8c03\u4f4e\u9608\u503c\uff0c\u540c\u7406\uff0c\u7ebf\u592a\u591a\u4e5f\u53ef\u4ee5\u9002\u5f53\u63d0\u9ad8\u9608\u503c\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u7136\u540e\u5c31\u662f\u5bfc\u51fa\u6587\u4ef6\u4e86\u3002<\/span><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014932\" data-ratio=\"0.3395853899308983\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/6_dogVjI3CdnVlSxKRibq75h41qET8xQ.png?resize=553%2C188\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0ce5DIFjblBFjJG9d2e1oo4xYmdogVjI3CdnVlSxKRibq75h41qET8xQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1013\" height=\"188 .0\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u8fd9\u91cc\u53ef\u4ee5\u76f4\u63a5\u5bfc\u51fa\u56fe\u7247\uff0c\u683c\u5f0f\u5c31\u662fpng\u548csvg\uff0csvg\u53ef\u4ee5\u7528AI\u53e6\u5b58\u4e3apdf\uff0c\u5982\u679c\u8981\u7ee7\u7eed\u7f8e\u5316\u7684\u753b\u5c31\u8981\u5bfc\u51fatsv\u683c\u5f0f\u7684\u6587\u4ef6\uff0c\u8fd9\u91cc\u9762\u4e3b\u8981\u662f\u8bb0\u8f7d\u4e86\u6709\u76f8\u4e92\u4f5c\u7528\u7684\u57fa\u56e0\u4ee5\u53ca\u76f8\u4e92\u4f5c\u7528\u7684\u5206\u6570\u3002Tsv\u6709\u4e24\u79cd\uff0c\u4e00\u79cd\u662f\u5355\u5411\u7684\u7ebf\uff0c\u53e6\u4e00\u79cd\u662f\u53cc\u5411\u7684\u7ebf\uff0c\u5c0f\u679c\u6bd4\u8f83\u4e60\u60ef\u5355\u5411\u7684\u7ebf\u3002<\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u4e0b\u8f7d\u4e0b\u6765\u4e4b\u540e\u5c31\u9700\u8981\u6211\u4eec\u7684\u53e6\u4e00\u4e2a\u4e3b\u89d2\u767b\u573a\u4e86\uff0c\u90a3\u5c31\u662fCytoscape\uff0c\u8fd9\u662f\u4e00\u4e2a\u8f6f\u4ef6\uff0c\u56fe\u6807\u662f\u8fd9\u6837\u7684\u3002<\/span><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014929\" data-ratio=\"1.0864197530864197\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/7_Pb00qUQE2l64EH7l5ibh3ocfpIuAfQ.png?resize=81%2C88\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0iac6XFH04wzApeVsUTML54iaILuPb00qUQE2l64EH7l5ibh3ocfpIuAfQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"81\" height=\"88 .0\" width=\"81 .0\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u6253\u5f00\u4e4b\u540e\u754c\u9762\u5982\u4e0b\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" data-imgfileid=\"100014937\" data-ratio=\"0.5385338345864662\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/8_ecfsgelqDndh2zicz4TuNV3eMialxA.png?resize=553%2C298\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0rzZLOvCxzEL68GRxuJiaLp5PLN6ecfsgelqDndh2zicz4TuNV3eMialxA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1064\" height=\"298 .20001220703125\" width=\"553 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onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0AjtXomqk0DzfFDw68hBfOJvVcyh8otNjMFVoaca1fPvHllic1renwFw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"663\" height=\"376 .6700134277344\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u9009\u62e9\u6211\u4eec\u5bfc\u51fa\u7684tsv\u6587\u4ef6\u5c31\u53ef\u4ee5\u6784\u5efa\u7f51\u7edc\u4e86\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014934\" data-ratio=\"0.5\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/10_iarfnjomVb4j7ichoUyqPlfo9iaY6g.png?resize=553%2C276\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0h2HeVXCYCkU8w16jj807pBkw3oiciarfnjomVb4j7ichoUyqPlfo9iaY6g\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"734\" height=\"276 .8699951171875\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u524d\u4e24\u5217\u5c31\u8868\u793a\u53c2\u4e0e\u7f51\u7edc\u7684\u86cb\u767d\u8282\u70b9\uff0c\u5904\u4e8e\u540c\u4e00\u884c\u7684\u5c31\u8bf4\u660e\u8fd9\u4e24\u4e2a\u8282\u70b9\u4e4b\u95f4\u88ab\u7ebf\u8fde\u7740\uff0c\u5982\u679c\u6211\u4eec\u8981\u81ea\u5df1\u6784\u5efa\u7f51\u7edc\u7684\u8bdd\uff0c\u8981\u81f3\u5c11\u4e24\u5217\u6570\u636e\uff0c\u5c31\u662f\u8fd9\u91cc\u7684\u524d\u9762\u4e24\u5217\uff0c\u5217\u6807\u9898\u4e5f\u8981\u548c\u8fd9\u4e2a\u4e00\u6837\uff0c\u5206\u522b\u662f#node1\u548cnode2\u3002<\/span><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014938\" data-ratio=\"0.5632054176072234\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/11_OoVQddV0gqYXCKiao7eCTau1JIiagg.png?resize=553%2C311\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0Bv6LrCybsTbw3wegxZY6UEQp2uOoVQddV0gqYXCKiao7eCTau1JIiagg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"886\" height=\"311 .8699951171875\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u8bfb\u8fdb\u6765\u5c31\u662f\u4e0a\u56fe\u8fd9\u4e2a\u7f51\u7edc\uff0c\u770b\u4e0a\u53bb\u5f88\u7b80\u964b\uff0c\u9700\u8981\u7f8e\u5316\u4e00\u4e0b\u3002\u8fd9\u91cc\u5c31\u9700\u8981\u63d2\u4ef6\u4e86\uff0c\u5904\u7406PPI\u6700\u5e38\u7528\u7684\u63d2\u4ef6\u5c31\u662fcytoHubba\u3002\u63d2\u4ef6\u9700\u8981\u5b89\u88c5\uff0c\u5b89\u88c5\u65b9\u6cd5\u5c31\u662f\u70b9\u51fbApp\uff0c\u7136\u540e\u5728\u5f39\u51fa\u7684\u8fd9\u4e2a\u6846\u91cc\u641c\u7d22\u9700\u8981\u5b89\u88c5\u7684\u63d2\u4ef6\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 21pt;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014936\" data-ratio=\"0.749730312837109\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/12_Ucibb1PYicibAyuTksPwg49lr7Y3JA.png?resize=553%2C415\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD0rpuWSkA8EibegfS2bcgYVTw494AiaUcibb1PYicibAyuTksPwg49lr7Y3JA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"927\" height=\"415 .1400146484375\" width=\"553 .739990234375\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u5b89\u88c5\u597d\u4e4b\u540e\u5c31\u53ef\u4ee5\u5728\u5750\u6807\u5de5\u5177\u680f\u91cc\u627e\u5230\u4e86\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 21pt;text-align: center;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014940\" data-ratio=\"1.6246153846153846\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/13_cDHcjriav3Ns9SnnTpQAGCwI1YKr0A.png?resize=325%2C528\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD00xX1BnE9GFvVJbMCZc3ptRGjiccDHcjriav3Ns9SnnTpQAGCwI1YKr0A\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"325\" height=\"528 .0699462890625\" width=\"325 .0\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u5206\u6790\u65b9\u6cd5\u4e5f\u6bd4\u8f83\u7b80\u5355\uff0c\u76f4\u63a5\u70b9\u51fbCalculate\uff0c\u5c31\u53ef\u4ee5\u8ba1\u7b97\u5206\u6790\u4e86\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"text-indent: 21pt;text-align: center;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-family: Calibri;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100014939\" data-ratio=\"1.573076923076923\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/14_PWJ00SzbLiale3quKaIrQV5xzQibdw.png?resize=260%2C409\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAwA8f7y7NSpZrnNlwLF9CD04vwINfxdL3baArEFlhQndx57s3PWJ00SzbLiale3quKaIrQV5xzQibdw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"260\" height=\"409 .010009765625\" width=\"260 .0\" data-recalc-dims=\"1\" \/><\/span><\/section>\n<section style=\"text-indent: 0em;margin-top: 8px;margin-bottom: 0px;\"><span style=\"font-size: 16px;font-family: \u5b8b\u4f53;font-variant: normal;text-transform: 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