{"id":59400,"date":"2024-06-17T08:02:05","date_gmt":"2024-06-17T00:02:05","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=59400"},"modified":"2024-06-17T08:02:05","modified_gmt":"2024-06-17T00:02:05","slug":"%e5%9b%be%e8%a1%a8%e9%85%8d%e8%89%b2%e8%bf%87%e4%ba%8e%e5%b9%b3%e5%ba%b8%ef%bc%9fggsci-%e4%b8%ba%e7%a7%91%e7%a0%94%e5%9b%be%e8%a1%a8%e5%a2%9e%e8%89%b2%e6%b7%bb%e5%bd%a9","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=59400","title":{"rendered":"\u56fe\u8868\u914d\u8272\u8fc7\u4e8e\u5e73\u5eb8\uff1fggsci–\u4e3a\u79d1\u7814\u56fe\u8868\u589e\u8272\u6dfb\u5f69"},"content":{"rendered":"


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weui-wa-hotarea\" id=\"js_name\">\u751f\u4fe1\u679c  <\/a><\/span><em id=\"publish_time\" class=\"rich_media_meta rich_media_meta_text\">2023-08-12 19:02:04<\/em><\/div>\n<p><content><\/p>\n<div class=\"reprint\">\n<p>\u8f6c\u81ea\u516c\u4f17\u53f7\uff1aR\u8bed\u8a00\u5b66\u5f92<br \/><a href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg5MDk3Mzg4OA==&mid=2247484880&idx=1&sn=fc9543d2a5ab2d0293a4e70062ba0a9d\" target=\"_blank\" title=\"\u9605\u8bfb\u539f\u6587\" rel=\"noopener\">http:\/\/mp.weixin.qq.com\/s?__biz=Mzg5MDk3Mzg4OA==&mid=2247484880&idx=1&sn=fc9543d2a5ab2d0293a4e70062ba0a9d<\/a><\/p>\n<\/div>\n<section style=\"font-size: 16px;margin-bottom: 24px;\">\n<section style=\"text-align: left;justify-content: flex-start;display: flex;flex-flow: row nowrap;margin-top: 20px;margin-bottom: 25px;\" powered-by=\"xiumi.us\">\n<section style=\"display: inline-block;width: auto;vertical-align: top;align-self: flex-start;flex: 0 0 auto;min-width: 5%;height: auto;background-color: rgb(249, 172, 172);box-shadow: rgb(249, 172, 172) 0px 0px 5px 3px;\">\n<section style=\"text-align: center;transform: translate3d(2px, 0px, 0px);margin-top: -14px;margin-bottom: -14px;\" powered-by=\"xiumi.us\">\n<p>{ \u70b9\u51fb\u84dd\u5b57\uff0c\u5173\u6ce8\u6211\u4eec }<\/p>\n<\/section>\n<\/section>\n<\/section>\n<section powered-by=\"xiumi.us\">\n<p style=\"white-space: normal;\">\u5927\u5bb6\u597d\uff0c\u4eca\u5929\u5c0f\u5e08\u59b9\u8981\u4e3a\u5927\u5bb6\u4ecb\u7ecd\u4e00\u4e2a\u5f3a\u5927\u800c\u7f8e\u5999\u7684R\u5305\u2014\u2014ggsci\uff01\u60f3\u5fc5\u5404\u4f4d\u5b66\u4e60\u751f\u4fe1\u7684\u5c0f\u4f19\u4f34\u90fd\u542c\u8bf4\u8fc7SCI\u5427\uff0c\u80fd\u53d1\u4e00\u7bc7SCI\u7684\u6587\u7ae0\uff0c\u90a3\u53ef\u662f\u505a\u751f\u7269\u79d1\u7814\u7684\u7814\u7a76\u8005\u68a6\u5bd0\u4ee5\u6c42\u7684\u4e00\u4ef6\u4e8b\u5440\uff01\u4eca\u5929\u6211\u4eec\u6216\u8bb8\u8fd8\u6ca1\u80fd\u591f\u53d1SCI\uff0c\u4f46\u4eca\u5929\u8ba9\u5c0f\u5e08\u59b9\u5e26\u5927\u5bb6\u5148\u6765\u7528\u7528SCI\u7684\u914d\u8272\uff01 <br \/><\/p>\n<p style=\"white-space: normal;\"><br \/><\/p>\n<p style=\"white-space: normal;\">ggsci \u662f\u4e00\u4e2a\u57fa\u4e8eggplot2\u7684R\u5305\uff0c\u65e8\u5728\u4e3a\u6570\u636e\u53ef\u89c6\u5316\u63d0\u4f9b\u4e30\u5bcc\u591a\u6837\u7684\u4e13\u4e1a\u7ea7\u989c\u8272\u4e3b\u9898\u3002ggplot2\u662fR \u4e2d\u6700\u53d7\u6b22\u8fce\u7684\u6570\u636e\u53ef\u89c6\u5316\u5305\uff0c\u800cggsci\u5219\u4e3aggplot2\u589e\u6dfb\u4e86\u66f4\u591a\u7684\u914d\u8272\u65b9\u6848\u3002\u9ed8\u8ba4\u7684ggplot2\u989c\u8272\u4e3b\u9898\u76f8\u5bf9\u8f83\u5c11\uff0c\u800cggsci\u5219\u4e3a\u6211\u4eec\u63d0\u4f9b\u4e86\u591a\u79cd\u4e13\u4e1a\u8bbe\u8ba1\u7684\u914d\u8272\u65b9\u6848\uff0c\u4e3a\u79d1\u7814\u56fe\u8868\u589e\u8272\u6dfb\u5f69\uff0c\u8ba9\u6211\u4eec\u7684\u6570\u636e\u53ef\u89c6\u5316\u66f4\u52a0\u5438\u5f15\u4eba\u548c\u6613\u8bfb\u3002\u65e0\u8bba\u662f\u751f\u7269\u4fe1\u606f\u5b66\u7814\u7a76\u8005\u3001\u533b\u5b66\u79d1\u5b66\u5bb6\u8fd8\u662f\u5176\u4ed6\u9886\u57df\u7684\u6570\u636e\u5206\u6790\u4eba\u5458\uff0cggsci \u90fd\u4f1a\u662f\u5c0f\u4f19\u4f34\u4eec\u7684\u5f97\u529b\u52a9\u624b\u3002\u8ba9\u5c0f\u5e08\u59b9\u5e26\u7740\u5927\u5bb6\u4e00\u8d77\u6765\u63a2\u7d22 ggsci \u7684\u9b45\u529b\u548c\u5e94\u7528\u573a\u666f\u5427\uff01<\/p>\n<p style=\"white-space: normal;\"><br \/><\/p>\n<p style=\"white-space: normal;\">\u4f7f\u7528 ggsci \u5305\u975e\u5e38\u7b80\u5355\uff0c\u53ea\u9700\u8981\u51e0\u884c\u4ee3\u7801\uff0c\u6211\u4eec\u5c31\u80fd\u5c06\u5176\u5e94\u7528\u5230 ggplot2 \u56fe\u8868\u4e2d\u3002<\/p>\n<p style=\"white-space: normal;\"><strong>\u9996\u5148\uff0c\u5c0f\u4f19\u4f34\u4eec\u9700\u8981\u5b89\u88c5\u5e76\u52a0\u8f7d ggsci \u5305\uff1a<\/strong><\/p>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__keyword\">if<\/span>(!require(<span class=\"code-snippet__string\">\"ggsci\"<\/span>))install.packages(<span class=\"code-snippet__string\">\"ggsci\"<\/span>)<\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## \u8f7d\u5165\u9700\u8981\u7684\u7a0b\u8f91\u5305\uff1aggsci<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## Warning: \u7a0b\u8f91\u5305'ggsci'\u662f\u7528R\u7248\u672c4.2.3 \u6765\u5efa\u9020\u7684<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__keyword\">if<\/span>(!require(<span class=\"code-snippet__string\">\"ggplot2\"<\/span>))install.packages(<span class=\"code-snippet__string\">\"ggplot2\"<\/span>)<\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## \u8f7d\u5165\u9700\u8981\u7684\u7a0b\u8f91\u5305\uff1aggplot2<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## Warning: \u7a0b\u8f91\u5305'ggplot2'\u662f\u7528R\u7248\u672c4.2.3 \u6765\u5efa\u9020\u7684<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">\u5b89\u88c5\u5b8c\u6210\u540e\uff0c\u6211\u4eec\u5c31\u53ef\u4ee5\u5f00\u59cb\u4f7f\u7528 ggsci \u5305\u4e86\u3002\u8ba9\u6211\u4eec\u6765\u770b\u51e0\u4e2a\u5177\u4f53\u7684\u5e94\u7528\u793a\u4f8b\uff0c\u5c55\u793a ggsci \u5728\u79d1\u7814\u56fe\u8868\u4e2d\u7684\u9b45\u529b\u5427\uff01<\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;justify-content: center;margin: 10px 0%;display: flex;flex-flow: row nowrap;\" powered-by=\"xiumi.us\">\n<section style=\"display: inline-block;vertical-align: middle;width: auto;min-width: 10%;flex: 0 0 auto;height: auto;line-height: 0;align-self: center;\">\n<section style=\"transform: rotateZ(328deg) scale(0.6);transform-origin: center center;margin: -20px -19px;max-width: unset !important;\" powered-by=\"xiumi.us\">\n<section style=\"justify-content: center;margin: 14px 0% 11px;transform: translate3d(5px, 0px, 0px);display: flex;flex-flow: row nowrap;\">\n<section style=\"display: inline-block;width: auto;vertical-align: top;min-width: 10%;flex: 0 0 auto;height: auto;line-height: 0;align-self: flex-start;\">\n<section style=\"\" powered-by=\"xiumi.us\">\n<section style=\"display: inline-block;width: 51px;height: 47px;vertical-align: top;overflow: hidden;border-style: solid;border-width: 3px;border-radius: 100%;border-color: rgb(252, 210, 125) rgba(255, 255, 255, 0) rgb(252, 210, 125) rgb(252, 210, 125);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<section style=\"transform: rotateZ(348deg);\" powered-by=\"xiumi.us\">\n<section style=\"margin-top: -37px;margin-right: 0%;margin-left: 0%;transform: translate3d(-12px, 0px, 0px);\">\n<section style=\"display: inline-block;width: 71px;height: 42px;vertical-align: top;overflow: hidden;border-style: solid;border-width: 3px;border-radius: 100%;border-color: rgb(252, 210, 125) rgb(252, 210, 125) rgba(255, 255, 255, 0) rgba(255, 255, 255, 0);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"display: inline-block;vertical-align: middle;width: auto;min-width: 10%;flex: 0 0 auto;height: auto;align-self: center;margin-left: -20px;\">\n<section style=\"transform: translate3d(-1px, 0px, 0px);\" powered-by=\"xiumi.us\">\n<section style=\"font-size: 19px;letter-spacing: 0px;color: rgb(249, 172, 172);padding-right: 6px;padding-left: 6px;text-align: justify;\">\n<p style=\"white-space: normal;\"><strong>\u793a\u4f8b1\uff1a\u751f\u7269\u4fe1\u606f\u5b66\u9886\u57df<\/strong><\/p>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"display: inline-block;vertical-align: top;width: auto;flex: 0 0 0%;height: auto;line-height: 0;align-self: flex-start;\">\n<section style=\"transform: rotateZ(145deg);\" powered-by=\"xiumi.us\">\n<section style=\"text-align: right;justify-content: flex-end;display: flex;flex-flow: row nowrap;\">\n<section style=\"display: inline-block;width: 10px;vertical-align: top;border-bottom: 2px solid rgb(245, 172, 151);border-bottom-right-radius: 0px;flex: 0 0 auto;height: auto;align-self: flex-start;\">\n<section style=\"transform: rotateZ(24deg);\" powered-by=\"xiumi.us\">\n<section style=\"margin-right: 0%;margin-bottom: 8px;margin-left: 0%;\">\n<section style=\"background-color: rgb(245, 172, 151);height: 2px;\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section powered-by=\"xiumi.us\">\n<p style=\"white-space: normal;\">\u5c0f\u5e08\u59b9\u4e3a\u5927\u5bb6\u4f7f\u7528\u4ee3\u7801\u6a21\u62df\u4e86\u4e00\u4e2a\u57fa\u56e0\u8868\u8fbe\u77e9\u9635\uff0c\u901a\u8fc7\u6bd4\u8f83\u7ed8\u5236\u57fa\u56e0\u7684\u8868\u8fbe\u6c34\u5e73\u5c55\u793a\u6211\u4eecggsci\u914d\u8272\u7684\u4f18\u8d8a\u6027\u54e6~ <\/p>\n<p style=\"white-space: normal;\"><strong>\u9996\u5148\uff0c\u5927\u5bb6\u53ef\u4ee5\u5148\u6a21\u62df\u6570\u636e\uff1a<\/strong><br \/><\/p>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u52a0\u8f7d\u6240\u9700\u7684\u5305library(matrixStats)# \u8bbe\u7f6e\u968f\u673a\u79cd\u5b50\u4ee5\u4fdd\u8bc1\u7ed3\u679c\u7684\u53ef\u590d\u73b0\u6027set.seed(123)# \u521b\u5efa\u6a21\u62df\u57fa\u56e0\u8868\u8fbe\u77e9\u9635num_samples <- 5num_genes <- 10# \u4f7f\u7528\u6b63\u6001\u5206\u5e03\u968f\u673a\u751f\u6210\u57fa\u56e0\u7684\u8868\u8fbe\u503cexpression_matrix <- matrix(rnorm(num_samples * num_genes, mean = 10, sd = 2), nrow = num_genes)# \u6dfb\u52a0\u884c\u548c\u5217\u540d\u79f0rownames(expression_matrix) <- paste0(\"Gene\", 1:num_genes)colnames(expression_matrix) <- paste0(\"Sample\", 1:num_samples)# \u9884\u89c8\u57fa\u56e0\u8868\u8fbe\u77e9\u9635print(head(expression_matrix))<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">##         Sample1   Sample2  Sample3   Sample4   Sample5## Gene1  8.879049 12.448164 7.864353 10.852928  8.610586## Gene2  9.539645 10.719628 9.564050  9.409857  9.584165## Gene3 13.117417 10.801543 7.947991 11.790251  7.469207## Gene4 10.141017 10.221365 8.542218 11.756267 14.337912## Gene5 10.258575  8.888318 8.749921 11.643162 12.415924## Gene6 13.430130 13.573826 6.626613 11.377281  7.753783<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u5c06\u57fa\u56e0\u8868\u8fbe\u77e9\u9635\u8f6c\u6362\u6210\u957f\u683c\u5f0f\uff08long format\uff09expression_df <- as.data.frame(expression_matrix)expression_df$Gene <- rownames(expression_df)expression_long <- tidyr::gather(expression_df, key = \"Sample\", value = \"Expression\", -Gene)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">\u63a5\u4e0b\u6765\uff0c\u6211\u4eec\u53ef\u4ee5\u4f7f\u7528 ggplot2 \u6765\u7ed8\u5236\u57fa\u56e0\u7684\u8868\u8fbe\u6c34\u5e73\uff0c\u5e76\u4f7f\u7528 ggsci \u63d0\u4f9b\u7684\u914d\u8272\u65b9\u6848\uff1a<\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u7ed8\u5236\u9ed8\u8ba4\u914d\u8272\u7684\u70ed\u56feggplot(expression_long, aes(x = Sample, y = Gene, fill = Expression)) +  geom_tile() +  scale_fill_gradient(low = \"white\", high = \"blue\") +  theme_minimal() +  theme(axis.text.x = element_text(angle = 45, hjust = 1))<\/span><\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;\" powered-by=\"xiumi.us\">\n<section style=\"vertical-align: middle;display: inline-block;line-height: 0;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.8\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/1_aYFhvKLBISYWzEthKxC7ibDhOMqLVA.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/oCSOtP61aEUHD1uHnnibb36qDCOib9Zb82jXnCnoLdLvaT4uKmo5k37gRRpiaYFhvKLBISYWzEthKxC7ibDhOMqLVA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"480\" style=\"vertical-align: middle;width: 100%;\" data-recalc-dims=\"1\" \/><\/section>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u7ed8\u5236\u4f7f\u7528 ggsci \u914d\u8272\u7684\u70ed\u56feggplot(expression_long, aes(x = Sample, y = Gene, fill = Expression)) + geom_tile() + ggsci::scale_fill_gsea() + theme_minimal() + theme(axis.text.x = element_text(angle = 45, hjust = 1))<\/span><\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;\" powered-by=\"xiumi.us\">\n<section style=\"vertical-align: middle;display: inline-block;line-height: 0;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.8\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/2_mVcs2hia4Eib75eoCzRicKs1HAbafA.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/oCSOtP61aEUHD1uHnnibb36qDCOib9Zb82dlBTGSkFu64eCJuK8nZHvzT4R5RmVcs2hia4Eib75eoCzRicKs1HAbafA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"480\" style=\"vertical-align: middle;width: 100%;\" data-recalc-dims=\"1\" \/><\/section>\n<\/section>\n<section style=\"text-align: center;justify-content: center;margin: 10px 0%;display: flex;flex-flow: row nowrap;\" powered-by=\"xiumi.us\">\n<section style=\"display: inline-block;vertical-align: middle;width: auto;min-width: 10%;flex: 0 0 auto;height: auto;line-height: 0;align-self: center;\">\n<section style=\"transform: rotateZ(328deg) scale(0.6);transform-origin: center center;margin: -20px -19px;max-width: unset !important;\" powered-by=\"xiumi.us\">\n<section style=\"justify-content: center;margin: 14px 0% 11px;transform: translate3d(5px, 0px, 0px);display: flex;flex-flow: row nowrap;\">\n<section style=\"display: inline-block;width: auto;vertical-align: top;min-width: 10%;flex: 0 0 auto;height: auto;line-height: 0;align-self: flex-start;\">\n<section style=\"\" powered-by=\"xiumi.us\">\n<section style=\"display: inline-block;width: 51px;height: 47px;vertical-align: top;overflow: hidden;border-style: solid;border-width: 3px;border-radius: 100%;border-color: rgb(252, 210, 125) rgba(255, 255, 255, 0) rgb(252, 210, 125) rgb(252, 210, 125);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<section style=\"transform: rotateZ(348deg);\" powered-by=\"xiumi.us\">\n<section style=\"margin-top: -37px;margin-right: 0%;margin-left: 0%;transform: translate3d(-12px, 0px, 0px);\">\n<section style=\"display: inline-block;width: 71px;height: 42px;vertical-align: top;overflow: hidden;border-style: solid;border-width: 3px;border-radius: 100%;border-color: rgb(252, 210, 125) rgb(252, 210, 125) rgba(255, 255, 255, 0) rgba(255, 255, 255, 0);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"display: inline-block;vertical-align: middle;width: auto;min-width: 10%;flex: 0 0 auto;height: auto;align-self: center;margin-left: -20px;\">\n<section style=\"transform: translate3d(-1px, 0px, 0px);\" powered-by=\"xiumi.us\">\n<section style=\"font-size: 19px;letter-spacing: 0px;color: rgb(249, 172, 172);padding-right: 6px;padding-left: 6px;text-align: justify;\">\n<p style=\"white-space: normal;\"><strong>\u793a\u4f8b2\uff1a\u533b\u5b66\u79d1\u5b66\u9886\u57df<\/strong><\/p>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"display: inline-block;vertical-align: top;width: auto;flex: 0 0 0%;height: auto;line-height: 0;align-self: flex-start;\">\n<section style=\"transform: rotateZ(145deg);\" powered-by=\"xiumi.us\">\n<section style=\"text-align: right;justify-content: flex-end;display: flex;flex-flow: row nowrap;\">\n<section style=\"display: inline-block;width: 10px;vertical-align: top;border-bottom: 2px solid rgb(245, 172, 151);border-bottom-right-radius: 0px;flex: 0 0 auto;height: auto;align-self: flex-start;\">\n<section style=\"transform: rotateZ(24deg);\" powered-by=\"xiumi.us\">\n<section style=\"margin-right: 0%;margin-bottom: 8px;margin-left: 0%;\">\n<section style=\"background-color: rgb(245, 172, 151);height: 2px;\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section powered-by=\"xiumi.us\">\n<p style=\"white-space: normal;\">\u5728\u533b\u5b66\u79d1\u5b66\u9886\u57df\uff0c\u6211\u4eec\u7ecf\u5e38\u9700\u8981\u7ed8\u5236\u751f\u5b58\u66f2\u7ebf\u6765\u5206\u6790\u60a3\u8005\u7684\u751f\u5b58\u65f6\u95f4\u3002\u6211\u4eec\u53ef\u4ee5\u4f7f\u7528 ggplot2 \u548c ggsci \u5305\u6765\u7ed8\u5236\u751f\u5b58\u66f2\u7ebf\uff0c\u5e76\u9009\u62e9\u5408\u9002\u7684\u914d\u8272\u65b9\u6848<\/p>\n<p style=\"white-space: normal;\">\u3002<\/p>\n<p style=\"white-space: normal;\">\u9996\u5148\u5c0f\u5e08\u59b9\u5148\u4e3a\u5927\u5bb6\u51c6\u5907\u4e00\u5957\u751f\u5b58\u66f2\u7ebf\u7684\u6a21\u62df\u6570\u636e\u3002\u6211\u4eec\u5047\u8bbe\u6709\u4e24\u7ec4\u6570\u636e\uff0c\u6bcf\u7ec4\u6570\u636e\u5305\u542b\u4e86\u4e00\u4e9b\u89c2\u6d4b\u65f6\u95f4\u70b9\u548c\u4e8b\u4ef6\uff08\u751f\u5b58\u6216\u6b7b\u4ea1\uff09\u4fe1\u606f\u3002\u4e3a\u4e86\u6a21\u62df\u6570\u636e\uff0c\u6211\u4eec\u4f7f\u7528 rnorm() \u51fd\u6570\u751f\u6210\u968f\u673a\u7684\u751f\u5b58\u65f6\u95f4\uff0c\u5e76\u4f7f\u7528 rbinom() \u51fd\u6570\u751f\u6210\u968f\u673a\u7684\u4e8b\u4ef6\u4fe1\u606f\uff080\u4ee3\u8868\u751f\u5b58\uff0c1\u4ee3\u8868\u6b7b\u4ea1\uff09\u3002<\/p>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u52a0\u8f7d\u6240\u9700\u7684\u5305library(survival)library(survminer)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## Warning: \u7a0b\u8f91\u5305'survminer'\u662f\u7528R\u7248\u672c4.2.3 \u6765\u5efa\u9020\u7684<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## \u8f7d\u5165\u9700\u8981\u7684\u7a0b\u8f91\u5305\uff1aggpubr<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## ## \u8f7d\u5165\u7a0b\u8f91\u5305\uff1a'survminer'<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">## The following object is masked from 'package:survival':## ##     myeloma<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u8bbe\u7f6e\u968f\u673a\u79cd\u5b50\u4ee5\u4fdd\u8bc1\u7ed3\u679c\u7684\u53ef\u590d\u73b0\u6027set.seed(123)# \u521b\u5efa\u6a21\u62df\u6570\u636enum_samples <- 100# \u7b2c\u4e00\u7ec4\u6570\u636egroup1_time <- rnorm(num_samples, mean = 50, sd = 10)group1_event <- rbinom(num_samples, size = 1, prob = 0.7)# \u7b2c\u4e8c\u7ec4\u6570\u636egroup2_time <- rnorm(num_samples, mean = 70, sd = 15)group2_event <- rbinom(num_samples, size = 1, prob = 0.5)# \u5408\u5e76\u6570\u636edata <- data.frame(time = c(group1_time, group2_time),                   event = c(group1_event, group2_event),                   group = factor(rep(c(\"Group1\", \"Group2\"), each = num_samples)))# \u9884\u89c8\u6a21\u62df\u7684\u751f\u5b58\u66f2\u7ebf\u6570\u636eprint(head(data))<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\">##       time event  group## 1 44.39524     1 Group1## 2 47.69823     0 Group1## 3 65.58708     1 Group1## 4 50.70508     1 Group1## 5 51.29288     1 Group1## 6 67.15065     0 Group1<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">\u63a5\u4e0b\u6765\uff0c\u6211\u4eec\u53ef\u4ee5\u4f7f\u7528 ggplot2 \u548c ggsci \u6765\u7ed8\u5236\u751f\u5b58\u66f2\u7ebf\uff0c\u5e76\u4f7f\u7528 ggsci \u63d0\u4f9b\u7684\u914d\u8272\u65b9\u6848\uff1a<\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u4f7f\u7528 Kaplan-Meier \u65b9\u6cd5\u8ba1\u7b97\u751f\u5b58\u66f2\u7ebfsurvfit_obj <- survfit(Surv(time, event) ~ group, data = data)# \u7ed8\u5236\u751f\u5b58\u66f2\u7ebf\u56fe\uff0c\u4f7f\u7528 ggplot2 \u9ed8\u8ba4\u914d\u8272ggsurvplot(survfit_obj, data = data, palette = \"default\")<\/span><\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;\" powered-by=\"xiumi.us\">\n<section style=\"vertical-align: middle;display: inline-block;line-height: 0;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.8\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/3_qLZg9ibFBxwpss8jQHPTy8sqiadDew.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/oCSOtP61aEUHD1uHnnibb36qDCOib9Zb82cuHTvuWe70wdlWSKY0qgOe8SV1qLZg9ibFBxwpss8jQHPTy8sqiadDew\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"480\" style=\"vertical-align: middle;width: 100%;\" data-recalc-dims=\"1\" \/><\/section>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># \u7ed8\u5236\u751f\u5b58\u66f2\u7ebf\u56fe\uff0c\u4f7f\u7528 ggsci \u63d0\u4f9b\u7684\u914d\u8272\u65b9\u6848ggsurvplot(survfit_obj, data = data, palette = \"jama\")<\/span><\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;\" powered-by=\"xiumi.us\">\n<section style=\"vertical-align: middle;display: inline-block;line-height: 0;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.8\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_ibePbVXibYwoO7eBw0rCQFVPHbTOFQ.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/oCSOtP61aEUHD1uHnnibb36qDCOib9Zb82hymoNPNcXpk5WH1ibjeOvBtyEnJibePbVXibYwoO7eBw0rCQFVPHbTOFQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"480\" style=\"vertical-align: middle;width: 100%;\" data-recalc-dims=\"1\" \/><\/section>\n<\/section>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"r\"><code><span class=\"code-snippet_outer\">ggsurvplot(survfit_obj, data = data, palette = <span class=\"code-snippet__string\">\"igv\"<\/span>)<\/span><\/code><\/pre>\n<\/section>\n<section style=\"text-align: center;margin-top: 10px;margin-bottom: 10px;line-height: 0;\" powered-by=\"xiumi.us\">\n<section style=\"vertical-align: middle;display: inline-block;line-height: 0;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-ratio=\"0.6175925925925926\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/5_OLeICjUWtwJRT3TbPEPYt6XAicZ9FA.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/oCSOtP61aEUHD1uHnnibb36qDCOib9Zb82I5AWQusXINmyPcH46tGrYHIgFOLeICjUWtwJRT3TbPEPYt6XAicZ9FA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1080\" style=\"vertical-align: middle;width: 100%;\" data-recalc-dims=\"1\" 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