{"id":59680,"date":"2024-06-17T08:38:32","date_gmt":"2024-06-17T00:38:32","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=59680"},"modified":"2024-06-17T08:38:32","modified_gmt":"2024-06-17T00:38:32","slug":"%e9%9d%9e%e6%a8%a1%e5%bc%8f%e7%94%9f%e7%89%a9%e5%9f%ba%e5%9b%a0%e6%b3%a8%e9%87%8a%e4%bf%a1%e6%81%af%e4%b8%8d%e4%bc%9a%e6%89%be%ef%bc%9f%e4%b8%8d%e6%80%95%ef%bc%8c%e5%b0%8f%e6%9e%9c%e6%95%99%e4%bd%a0-2","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=59680","title":{"rendered":"\u975e\u6a21\u5f0f\u751f\u7269\u57fa\u56e0\u6ce8\u91ca\u4fe1\u606f\u4e0d\u4f1a\u627e\uff1f\u4e0d\u6015\uff0c\u5c0f\u679c\u6559\u4f60\u7528AnnotationHub\u5305\u8f7b\u677e\u62ff\u634f"},"content":{"rendered":"


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appmsg_title_tag weui-wa-hotarea\">\u539f\u521b  <\/span><span class=\"rich_media_meta rich_media_meta_text\">\u5c0f\u679c  <\/span><span class=\"rich_media_meta rich_media_meta_nickname\" id=\"profileBt\"><a href=\"javascript:void(0);\" class=\"wx_tap_link js_wx_tap_highlight weui-wa-hotarea\" id=\"js_name\">\u751f\u4fe1\u679c  <\/a><\/span><em id=\"publish_time\" class=\"rich_media_meta rich_media_meta_text\">2023-09-26 19:00:18<\/em><\/div>\n<p><content><\/p>\n<div class=\"topic\">\n<p>\u6536\u5f55\u4e8e\u8bdd\u9898<\/p>\n<p><a href=\"https:\/\/mp.weixin.qq.com\/mp\/appmsgalbum?__biz=Mzg3OTg3MjQyNg==&action=getalbum&album_id=2812010014583390210#wechat_redirect\" title=\"R\u4ee3\u7801\" target=\"_blank\" rel=\"noopener\">#R\u4ee3\u7801<\/a><a href=\"https:\/\/mp.weixin.qq.com\/mp\/appmsgalbum?__biz=Mzg3OTg3MjQyNg==&action=getalbum&album_id=2664545260517294084#wechat_redirect\" title=\"\u751f\u4fe1\u5b9e\u64cd\" target=\"_blank\" rel=\"noopener\">#\u751f\u4fe1\u5b9e\u64cd<\/a><a href=\"https:\/\/mp.weixin.qq.com\/mp\/appmsgalbum?__biz=Mzg3OTg3MjQyNg==&action=getalbum&album_id=3138206666140942339#wechat_redirect\" title=\"\u751f\u4fe1\u6570\u636e\u5e93\" target=\"_blank\" rel=\"noopener\">#\u751f\u4fe1\u6570\u636e\u5e93<\/a><a href=\"https:\/\/mp.weixin.qq.com\/mp\/appmsgalbum?__biz=Mzg3OTg3MjQyNg==&action=getalbum&album_id=3138206666342268940#wechat_redirect\" title=\"\u751f\u4fe1\u5c0f\u767d\u76f8\u5173\" target=\"_blank\" rel=\"noopener\">#\u751f\u4fe1\u5c0f\u767d\u76f8\u5173<\/a><\/p>\n<\/div>\n<section data-mpa-powered-by=\"yiban.io\">\n<section>\n<section>\n<section>\n<section>\n<section>\n<section data-width=\"100%\">\n<section>\n<section>\n<section>\n<section>\n<section>\n<section>\n<section>\n<section>\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section powered-by=\"xiumi.us\">\n<section powered-by=\"xiumi.us\">\n<section>\n<p><span style=\"font-size: var(--articleFontsize);letter-spacing: 0.034em;\"><\/span><strong style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 15px;letter-spacing: 0.034em;\"><span style=\"color: rgb(0, 122, 170);\">\u975e\u6a21\u5f0f\u751f\u7269\u7684\u6ce8\u91ca\u4fe1\u606f\u68c0\u7d22<\/span><\/strong><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section data-role=\"list\" style=\"\">\n<section powered-by=\"xiumi.us\" style=\"\">\n<section style=\"\">\n<section powered-by=\"xiumi.us\" style=\"\">\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 14px;\">\u81ea<\/span>RNA<span style=\"font-size: 14px;\">\u6d4b\u5e8f\uff08<\/span><span style=\"font-size: 14px;\">RNA-seq<\/span><span style=\"font-size: 14px;\">\uff09\u7684\u6280\u672f\u88ab\u53d1\u660e\u4ee5\u6765\uff0c\u5b83\u5728\u5206\u5b50\u751f\u7269\u5b66\u7684\u9886\u57df\u5185\u5f97\u5230\u4e86\u5e7f\u6cdb\u7684\u5e94\u7528\u3002\u4e0e\u4f20\u7edf\u7684\u65b9\u6cd5\u76f8\u6bd4\uff0c<\/span><span style=\"font-size: 14px;\">RNA-seq<\/span><span style=\"font-size: 14px;\">\u66f4\u80fd\u591f\u5168\u9762\u548c\u7cbe\u51c6\u5730\u63ed\u793a\u57fa\u56e0\u5728\u4e0d\u540c\u5c42\u9762\u4e0a\u7684\u529f\u80fd\u548c\u4f5c\u7528\u3002\u8fd9\u4e00\u6280\u672f\u7a81\u51fa\u4e86<\/span><span style=\"font-size: 14px;\">mRNA<\/span><span style=\"font-size: 14px;\">\u526a\u63a5\u7684\u590d\u6742\u6027\uff0c\u5e76\u9610\u660e\u4e86\u975e\u7f16\u7801<\/span><span style=\"font-size: 14px;\">RNA<\/span><span style=\"font-size: 14px;\">\u4ee5\u53ca\u589e\u5f3a\u5b50<\/span><span style=\"font-size: 14px;\">RNA<\/span><span style=\"font-size: 14px;\">\u5bf9\u4e8e\u57fa\u56e0\u8868\u8fbe\u7684\u8c03\u63a7\u673a\u5236\uff0c\u589e\u5f3a\u4e86\u6211\u4eec\u5bf9\u4e8e\u751f\u7269\u8fc7\u7a0b\u7684\u4e86\u89e3\uff0c\u63a8\u52a8\u4e86\u751f\u7269\u5b66\u5728\u57fa\u56e0\u7ec4\u3001\u8f6c\u5f55\u7ec4\u4ee5\u53ca\u8868\u89c2\u9057\u4f20\u5b66\u7b49\u65b9\u9762\u7684\u7814\u7a76\u8fdb\u6b65\u3002<\/span><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 14px;\">\u7136\u800c\uff0c\u5f53\u6211\u4eec\u901a\u8fc7<\/span>RNA-seq<span style=\"font-size: 14px;\">\u5f97\u5230\u4e86\u4e00\u7cfb\u5217\u5dee\u5f02\u57fa\u56e0\u7684<\/span><span style=\"font-size: 14px;\">geneid<\/span><span style=\"font-size: 14px;\">\u540e\uff0c\u4e00\u4e2a\u95ee\u9898\u6446\u5728\u6211\u4eec\u9762\u524d\uff1a\u6211\u4eec\u5e76\u4e0d\u6e05\u695a\u8fd9\u4e9b<\/span><span style=\"font-size: 14px;\">geneid<\/span><span style=\"font-size: 14px;\">\u5b9e\u9645\u4e0a\u5bf9\u5e94\u7684\u662f\u54ea\u4e9b\u57fa\u56e0\u3002\u6b64\u65f6\uff0c\u6211\u4eec\u9700\u8981\u5bf9\u8fd9\u4e9b\u57fa\u56e0\u505a\u8fdb\u4e00\u6b65\u7684\u529f\u80fd\u6ce8\u91ca\uff0c\u4e5f\u5c31\u662f\u627e\u51fa\u8fd9\u4e9b\u57fa\u56e0\u5728\u751f\u7269\u4f53\u4e2d\u5b9e\u9645\u4e0a\u8d77\u4e86\u4ec0\u4e48\u4f5c\u7528\uff0c\u8fd9\u4e9b\u5dee\u5f02\u8868\u8fbe\u7684\u57fa\u56e0\u662f\u5426\u4e0e\u7279\u5b9a\u7684\u8868\u578b\u76f8\u5173\uff1f\u8981\u89e3\u7b54\u8fd9\u4e9b\u95ee\u9898\uff0c\u5c31\u9700\u8981\u6211\u4eec\u628a\u5f97\u5230\u7684<\/span><span style=\"font-size: 14px;\">geneid<\/span><span style=\"font-size: 14px;\">\u4e0e<\/span><span style=\"font-size: 14px;\">gene<\/span><span style=\"font-size: 14px;\">\u6570\u636e\u5e93\u8fdb\u884c\u6bd4\u5bf9\uff0c\u6316\u6398\u51fa\u6bcf\u4e00\u4e2a<\/span><span style=\"font-size: 14px;\">geneid<\/span><span style=\"font-size: 14px;\">\u80cc\u540e\u7684\u57fa\u56e0\u4fe1\u606f\u3002\u8fd9\u4e2a\u8fc7\u7a0b\u5c31\u597d\u6bd4\u67e5\u5b57\u5178\u4e00\u6837\uff0c\u6211\u4eec\u6709\u4e86\u9875\u7801\uff0c\u63a5\u4e0b\u6765\u5c31\u9700\u8981\u77e5\u9053\u8fd9\u4e2a\u9875\u7801\u5bf9\u5e94\u7684\u662f\u4ec0\u4e48\u5185\u5bb9\u3002<\/span><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 14px;\">\u5bf9\u4e8e\u50cf\u4eba\u7c7b\u3001\u5c0f\u9f20\u3001\u62df\u5357\u82a5\u3001\u5927\u80a0\u6746\u83cc\u7b49\u6a21\u5f0f\u751f\u7269\u6765\u8bf4\uff0c\u8fdb\u884c\u57fa\u56e0\u6ce8\u91ca\u7684\u8fc7\u7a0b\u76f8\u5bf9\u5bb9\u6613\uff0c\u56e0\u4e3a\u5b83\u4eec\u90fd\u6709\u76f8\u5bf9\u5b8c\u5584\u7684\u6570\u636e\u5e93\u53ef\u4ee5\u53c2\u8003\u3002\u4f46\u662f\uff0c\u5bf9\u4e8e\u975e\u6a21\u5f0f\u751f\u7269\uff0c\u7531\u4e8e\u901a\u5e38\u7f3a\u4e4f\u826f\u597d\u7684\u53c2\u8003\u57fa\u56e0\u5e93\uff0c\u8fdb\u884c\u57fa\u56e0\u6ce8\u91ca\u7684\u8fc7\u7a0b\u5c31\u663e\u5f97\u5341\u5206\u56f0\u96be\u3002\u6b64\u65f6\uff0c<\/span>R<span style=\"font-size: 14px;\">\u5305<\/span>AnnotationHub<span style=\"font-size: 14px;\">\u63d0\u4f9b\u4e86\u4e00\u79cd\u975e\u5e38\u6709\u6548\u7684\u89e3\u51b3\u65b9\u6848\u3002\u5b83\u80fd\u591f\u8f7b\u677e\u5730\u68c0\u7d22\u975e\u6a21\u5f0f\u751f\u7269\u7684\u6ce8\u91ca\u4fe1\u606f\uff0c\u5bf9\u8fc7\u53bb\u5728\u6ce8\u91ca\u975e\u6a21\u5f0f\u751f\u7269\u57fa\u56e0\u65f6\u9047\u5230\u7684\u95ee\u9898\u63d0\u4f9b\u4e86\u6709\u6548\u7684\u89e3\u51b3\u65b9\u5f0f\u3002<\/span><\/span><span style=\"\"><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 14px;\"><br \/><\/span><\/span><\/p>\n<h2><span style=\"font-size: 16px;color: rgb(0, 122, 170);font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><strong><span style=\"color: rgb(0, 122, 170);font-size: 16px;\">\u4e0b\u9762\u5c0f\u679c\u7528\u7389\u7c73\u4f5c\u4e3a\u793a\u8303<\/span><\/strong><\/span><strong><span style=\"\"><o:p><\/o:p><\/span><\/strong><\/h2>\n<p><br \/><\/p>\n<section style=\"\">\n<section data-id=\"22363\" powered-by=\"xmyeditor.com\" data-type=\"lspecial02\" data-md5=\"7ab9d\" style=\"font-size: 16px;\">\n<section style=\"text-align: left;\" powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\">\n<section style=\"display: inline-block;vertical-align: middle;border-top: 1px dotted rgb(61, 170, 214);border-bottom: 1px dotted rgb(61, 170, 214);padding-right: 10px;padding-left: 10px;\" powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\">\n<section powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\">\n<p><strong><span style=\"color: rgb(0, 122, 170);\">1<\/span><\/strong><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><strong><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;color: rgb(0, 122, 170);\">\u3001<\/span><\/strong><strong><span style=\"font-size: 16px;color: rgb(0, 122, 170);font-family: Calibri;\">\u4e0b\u8f7dAnnotationHub<span style=\"font-size: 16px;color: rgb(0, 122, 170);font-family: \u5b8b\u4f53;\">\u5305\u5e76\u52a0\u8f7d<\/span><\/span><\/strong><\/span><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section>\n<section style=\"margin-bottom: 0px;padding-right: 15px;padding-left: 15px;outline: 0px;font-size: 14px;visibility: visible;\">\n<section>\n<p><br \/><\/p>\n<section style=\"margin-bottom: 0px;padding-right: 15px;padding-left: 15px;outline: 0px;font-family: system-ui, -apple-system, BlinkMacSystemFont, "Helvetica Neue", "PingFang SC", "Hiragino Sans GB", "Microsoft YaHei UI", "Microsoft YaHei", Arial, sans-serif;letter-spacing: 0.578px;text-wrap: wrap;background-color: rgb(255, 255, 255);font-size: 14px;visibility: visible;\">\n<section style=\"padding-right: 15px;padding-left: 15px;outline: 0px;visibility: visible;\">\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"makefile\"><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__section\">BiocManager::install(\"AnnotationHub\u201d) #\u5305\u4e0b\u8f7d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\">library(AnnotationHub) <span class=\"code-snippet__comment\">#\u52a0\u8f7d<\/span><\/span><\/code><\/pre>\n<\/section>\n<\/section>\n<\/section>\n<h3><span style=\"font-size: 14px;\">\u6709\u4e24\u79cd\u65b9\u5f0f\u53ef\u4ee5\u627e\u5230\u60f3\u8981\u7684\u975e\u6a21\u5f0f\u751f\u7269\u6ce8\u91ca\u4fe1\u606f<\/span><\/h3>\n<p><span style=\"text-decoration: underline;\"><strong><span style=\"text-decoration: underline;color: rgb(0, 122, 170);\">\u7b2c\u4e00\u79cd:<\/span><\/strong><\/span><br \/><\/p>\n<section style=\"margin-bottom: 0px;padding-right: 15px;padding-left: 15px;outline: 0px;font-family: system-ui, -apple-system, BlinkMacSystemFont, "Helvetica Neue", "PingFang SC", "Hiragino Sans GB", "Microsoft YaHei UI", "Microsoft YaHei", Arial, sans-serif;letter-spacing: 0.578px;text-wrap: wrap;background-color: rgb(255, 255, 255);font-size: 14px;visibility: visible;\">\n<section style=\"padding-right: 15px;padding-left: 15px;outline: 0px;visibility: visible;\">\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"properties\"><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">ah<\/span> <span class=\"code-snippet__string\"><- AnnotationHub()<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__meta\">query(hub,<\/span> <span class=\"code-snippet__string\">\"zea\")<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__attr\">AnnotationHub<\/span> <span class=\"code-snippet__string\">with 12 records<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># snapshotDate(): 2022-10-31<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># $dataprovider: ftp:\/\/ftp.ncbi.nlm.nih.gov\/gene\/DATA\/, NCBI,DBCLS, WikiPathways, ...<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># $species: Zea mays, Gibberella zeae, Zea mays_var._japonica, Heliothis zea, Heli...<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># $rdataclass: OrgDb, SQLiteFile, Tibble, Inparanoid8Db<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># additional mcols(): taxonomyid, genome, description, coordinate_1_based,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># maintainer, rdatadateadded, preparerclass, tags, rdatapath, sourceurl,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># sourcetype <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span class=\"code-snippet__comment\"># retrieve records with, e.g., 'object[[\"AH10514\"]]' <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">title<\/span> <span class=\"code-snippet__string\"><\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH10514<\/span> <span class=\"code-snippet__string\">| hom.Gibberella_zeae.inp8.sqlite <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH91642<\/span> <span class=\"code-snippet__string\">| MeSHDb for Zea mays (Corn, v001) <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH91804<\/span> <span class=\"code-snippet__string\">| wikipathways_Gibberella_zeae_metabolites.rda<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH91817<\/span> <span class=\"code-snippet__string\">| wikipathways_Zea_mays_metabolites.rda <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH97909<\/span> <span class=\"code-snippet__string\">| MeSHDb for Zea mays (Corn, v002) <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__meta\">...<\/span> <span class=\"code-snippet__string\">... <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH107469<\/span> <span class=\"code-snippet__string\">| org.Zea_mays.eg.sqlite <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH107470<\/span> <span class=\"code-snippet__string\">| org.Zea_mays_var._japonica.eg.sqlite <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH108747<\/span> <span class=\"code-snippet__string\">| org.Helicoverpa_zea.eg.sqlite <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH108748<\/span> <span class=\"code-snippet__string\">| org.Heliothis_zea.eg.sqlite <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"> <span class=\"code-snippet__attr\">AH109103<\/span> <span class=\"code-snippet__string\">| org.Gibberella_zeae_PH-1.eg.sqlite<\/span><\/span><\/code><\/pre>\n<\/section>\n<\/section>\n<\/section>\n<p><span style=\"font-size: 14px;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 14px;color: rgb(0, 0, 0);\">\u901a\u8fc7\u68c0\u7d22\uff0c<\/span><span style=\"font-size: 14px;color: rgb(235, 87, 87);background: rgb(237, 236, 235);\">org.Zea_mays.eg.sqlite<\/span><span style=\"font-size: 14px;color: rgb(0, 0, 0);\">\u5c31\u662f\u5c0f\u679c\u60f3\u627e\u7684\u7389\u7c73Org\u6570\u636e\u5e93\u3002<\/span><span style=\"font-family: Calibri;font-size: 10.5pt;\"><o:p><\/o:p><\/span><\/span><\/p>\n<p><span style=\"font-size: 14px;\"><br \/><\/span><\/p>\n<p><span style=\"text-decoration: underline;\"><strong><span style=\"text-decoration: underline;font-size: 14px;color: rgb(0, 122, 170);\">\u7b2c\u4e8c\u79cd\uff1a<\/span><\/strong><\/span><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;letter-spacing: 0.578px;\">\u6211\u4eec\u4e5f\u53ef\u4ee5\u8bbf\u95ee\u5b83\u7684\u5b98\u65b9\u63a5\u53e3\u6765\u66f4\u5feb\u5730\u83b7\u53d6<br \/><\/span><\/p>\n<p><span style=\"text-decoration: underline;color: rgb(5, 99, 193);font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\">BiocHub Server API<\/span><span style=\"text-decoration: underline;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;color: rgb(5, 99, 193);\"><\/span><\/p>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.5940054495912807\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/1_g5roRc4ibRY4AbKRMoIo0SQiavucvg.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxxXiaZjQfp5iclDXa05tNZJfnc4E3CAxJpoRA9HgS2ibOFRaRdVg5roRc4ibRY4AbKRMoIo0SQiavucvg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"734\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p><span style=\"\"><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-size: 10.5pt;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 10.5pt;\">\u518d\u7136\u540e\u6211\u4eec\u5c31\u53ef\u4ee5\u70b9\u51fb<\/span>species<span style=\"font-size: 10.5pt;\">\u6309\u7167\u7269\u79cd\u6765\u8fdb\u884c\u5feb\u901f\u68c0\u7d22<\/span><o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-size: 10.5pt;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 10.5pt;\">\u4ece\u5de6\u4e0b\u89d2\u53ef\u4ee5\u6e05\u695a\u5730\u770b\u5230\u6709\u5c06\u8fd1<\/span>6000<span style=\"font-size: 10.5pt;\">\u79cd\u53ef\u7528\u7684\u7269\u79cd\uff0c\u8fd9\u662f\u4e0d\u662f\u6bd4\u4f60\u60f3\u8c61\u5f97\u591a\u5f88\u591a\u5462\uff1f<\/span><\/span><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\"><o:p><\/o:p><\/span><\/p>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.2956403269754768\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/2_eMwlxAvDwpjo9aicraAExaVuL1rk4Q.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxxXiaZjQfp5iclDXa05tNZJfAWsA5A1tWZC3p31XGOT0l02OWeMwlxAvDwpjo9aicraAExaVuL1rk4Q\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"734\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\">\u8f93\u5165\u5c0f\u679c\u7684\u597d\u670b\u53cb\u7389\u7c73\u7684\u5b66\u540dzea mays<o:p><\/o:p><\/span><\/p>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-croporisrc=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2023-09-26_\u975e\u6a21\u5f0f\u751f\u7269\u57fa\u56e0\u6ce8\u91ca\u4fe1\u606f\u4e0d\u4f1a\u627e\uff1f\u4e0d\u6015\uff0c\u5c0f\u679c\u6559\u4f60\u7528AnnotationHub\u5305\u8f7b\u677e\u62ff\u634f\/3_offMEhaYnWiaZ8p3XIuicgCAVJbJKg.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxxXiaZjQfp5iclDXa05tNZJfrr199nSDGvd519z9pM34ARqjniboffMEhaYnWiaZ8p3XIuicgCAVJbJKg\/0?wx_fmt=png'\" data-cropx1=\"0\" data-cropx2=\"734\" data-cropy1=\"0\" data-cropy2=\"131.2627737226277\" data-galleryid=\"\" data-ratio=\"0.1784741144414169\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/4_SZrevnjSqWsKQ2d27Now4G5ysG1sPQ.jpg?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_jpg\/zcicibWZessAxxXiaZjQfp5iclDXa05tNZJfiaiconz9ZLWqxPCQUcsnCFkllTSZrevnjSqWsKQ2d27Now4G5ysG1sPQ\/640?wx_fmt=jpeg'\" data-type=\"jpeg\" data-w=\"734\" style=\"width: 548px;height: 98px;\" data-recalc-dims=\"1\" \/><\/p>\n<p><span style=\"font-size: 10.5pt;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 10.5pt;\">\u70b9\u51fb<\/span>zea mays<span style=\"font-size: 10.5pt;\">\uff0c\u592a\u597d\u4e86\u5c0f\u679c\u627e\u5230\u4e86\u7389\u7c73\u7684org\u6570\u636e\u5e93~<\/span><\/span><\/p>\n<p><span style=\"font-size: 10.5pt;font-family: Calibri;\"><br \/><\/span><\/p>\n<p style=\"text-align: center;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-ratio=\"0.3872340425531915\" data-s=\"300,640\" src=\"https:\/\/i0.wp.com\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2024\/06\/5_SO89Sl444zRbibTsK3ibqtCFk5d7nw.png?w=640\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxxXiaZjQfp5iclDXa05tNZJfD2mAqfysVHK4ibkcbVBfeY2dqcISO89Sl444zRbibTsK3ibqtCFk5d7nw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"705\" style=\"\" data-recalc-dims=\"1\" \/><\/p>\n<p><br \/><\/p>\n<section>\n<section>\n<section>\n<section data-id=\"22363\" powered-by=\"xmyeditor.com\" data-type=\"lspecial02\" data-md5=\"7ab9d\" style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;\">\n<section powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\" style=\"text-align: left;\">\n<section powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\" style=\"padding-right: 10px;padding-left: 10px;display: inline-block;vertical-align: middle;border-top: 1px dotted rgb(61, 170, 214);border-bottom: 1px dotted rgb(61, 170, 214);\">\n<section powered-by=\"xmyeditor.com\" data-md5=\"7ab9d\">\n<p><span style=\"color:#007aaa;\"><strong>2\u3001<\/strong><\/span><strong style=\"color: rgb(0, 122, 170);font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;letter-spacing: 0.578px;\">\u83b7\u53d6\u7389\u7c73\u6ce8\u91ca\u4fe1\u606f<\/strong><strong style=\"color: rgb(0, 122, 170);letter-spacing: 0.578px;\"><\/strong><span style=\"letter-spacing: 0.578px;font-size: 14px;text-align: justify;\"><\/span><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<p>\u901a\u8fc7\u5bf9\u5e94\u7684accession number, \u83b7\u53d6\u6587\u4ef6AH107469 \u3002<o:p><\/o:p><\/p>\n<p>\u5e76\u5c06\u6587\u4ef6\u5b58\u5165maize\u5bf9\u8c61\u4e2d\uff0c\u6211\u4eec\u53ef\u4ee5\u770b\u5230\u5b83\u5305\u542b\u4e86\u7389\u7c7349905\u4e2a\u57fa\u56e0\u7684\u6ce8\u91ca\u3002<\/p>\n<section style=\"margin-bottom: 0px;padding-right: 15px;padding-left: 15px;outline: 0px;font-family: system-ui, -apple-system, BlinkMacSystemFont, "Helvetica Neue", "PingFang SC", "Hiragino Sans GB", "Microsoft YaHei UI", "Microsoft YaHei", Arial, sans-serif;letter-spacing: 0.578px;text-wrap: wrap;background-color: rgb(255, 255, 255);font-size: 14px;visibility: visible;\">\n<section style=\"padding-right: 15px;padding-left: 15px;outline: 0px;visibility: visible;\">\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"shell\"><code><span class=\"code-snippet_outer\">> maize <- hub[['AH107469']]<\/span><\/code><code><span class=\"code-snippet_outer\">downloading 1 resources<\/span><\/code><code><span class=\"code-snippet_outer\">retrieving 1 resource<\/span><\/code><code><span class=\"code-snippet_outer\">|==============================================| 100%<\/span><\/code><code><span class=\"code-snippet_outer\">loading from cache<\/span><\/code><code><span class=\"code-snippet_outer\">> length(keys(maize))<\/span><\/code><code><span class=\"code-snippet_outer\">[1] 49905<\/span><\/code><\/pre>\n<\/section>\n<\/section>\n<\/section>\n<p><span style=\"font-size: 10.5pt;font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;\"><span style=\"font-size: 10.5pt;\">\u8fd9\u4e2a<\/span>Org<span style=\"font-size: 10.5pt;\">\u6570\u636e\u5e93\uff0c\u5305\u542b\u6709\u4ee5\u4e0b\u4e00\u4e9b\u6ce8\u91ca\u4fe1\u606f\uff08\u597d\u591a\u5c0f\u679c\u90fd\u8fd8\u672a\u63a5\u89e6\u8fc7\uff09\uff1a<\/span><\/span><span style=\"font-family: Calibri;font-size: 10.5pt;letter-spacing: 0.578px;\"><\/span><\/p>\n<section style=\"margin-bottom: 0px;padding-right: 15px;padding-left: 15px;font-size: 14px;letter-spacing: 0.578px;text-wrap: wrap;outline: 0px;font-family: system-ui, -apple-system, BlinkMacSystemFont, "Helvetica Neue", "PingFang SC", "Hiragino Sans GB", "Microsoft YaHei UI", "Microsoft YaHei", Arial, sans-serif;background-color: rgb(255, 255, 255);visibility: visible;\">\n<section style=\"padding-right: 15px;padding-left: 15px;outline: 0px;visibility: visible;\">\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"cs\"><code><span class=\"code-snippet_outer\">> columns(maize)<\/span><\/code><code><span class=\"code-snippet_outer\">[1] \"ACCNUM\" \"ALIAS\" \"CHR\"<\/span><\/code><code><span class=\"code-snippet_outer\">[4] \"ENTREZID\" \"EVIDENCE\" \"EVIDENCEALL\"<\/span><\/code><code><span class=\"code-snippet_outer\">[7] \"GENENAME\" \"GID\" \"GO\"<\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\">[10] \"GOALL\" \"ONTOLOGY\" \"ONTOLOGYALL\"<\/span><\/code><code><span class=\"code-snippet_outer\">[13] \"PMID\" \"REFSEQ\" \"SYMBOL\"<\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\">[16] <span class=\"code-snippet__string\">\"UNIGENE\"<\/span><\/span><\/code><\/pre>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"font-size: 16px;\">\n<p style=\"text-align: center;\"><br \/><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\">\u6709\u4e86Org\u6570\u636e\u5e93\u4e4b\u540e\u5c31\u53ef\u4ee5\u8fdb\u884c\u540e\u7eed\u7684\u64cd\u4f5c\u4e86\u3002\u6bd4\u5982\u4e0d\u540c\u6570\u636e\u5e93\u7684ID\u8f6c\u5316\uff0c\u57fa\u56e0\/\u8f6c\u5f55\u672c\/\u86cb\u767d\u7684ID\u8f6c\u5316\uff0cGO\u6ce8\u91ca\u4ee5\u53ca\u5176\u4ed6\u6ce8\u91ca\u3002<o:p><\/o:p><\/span><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\">\u600e\u4e48\u6837\u662f\u4e0d\u662f\u5f88\u65b9\u4fbf\u5462\uff0c\u6b22\u8fce\u548c\u5c0f\u679c\u8ba8\u8bba~<\/span><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;letter-spacing: 0.034em;\"><\/span><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\"><br \/><\/span><\/p>\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 10.5pt;\"><\/span><\/p>\n<section powered-by=\"xiumi.us\" style=\"margin-bottom: 0px;letter-spacing: 0.578px;white-space: normal;\">\n<p><span style=\"font-family: "Helvetica Neue", Helvetica, "Hiragino Sans GB", "Microsoft YaHei", Arial, sans-serif;font-size: 14px;color: rgb(0, 0, 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rgb(144, 215, 236);border-right-color: rgb(46, 172, 109);box-shadow: rgb(0, 0, 0) 0px 0px 0px;border-bottom-left-radius: 0px;\">\n<section powered-by=\"xiumi.us\" style=\"padding-right: 3px;padding-left: 3px;\">\n<section style=\"margin-top: 0.95em;margin-bottom: -0.65em;display: inline-block;width: 520px;vertical-align: top;\">\n<section style=\"width: 520px;\">\n<section style=\"border-top: 1px solid rgb(0, 0, 0);width: 519.479px;float: left;\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<section style=\"margin-top: -3px;width: 6px;height: 6px;border-radius: 100%;float: right;background-color: rgb(46, 172, 109);\"><svg viewbox=\"0 0 1 1\" style=\"float:left;line-height:0;width:0;vertical-align:top;\"><\/svg><\/section>\n<\/section>\n<section style=\"margin-top: -1em;padding: 3px 10px;display: inline-block;vertical-align: top;background-color: rgb(255, 255, 255);color: rgb(0, 154, 68);\">\n<p><strong>\u5f80\u671f\u63a8\u8350<\/strong><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section powered-by=\"xiumi.us\" style=\"text-align: justify;\">\n<section style=\"letter-spacing: 0.578px;line-height: 1.75em;\"><a target=\"_blank\" href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg3OTg3MjQyNg==&mid=2247491794&idx=1&sn=2b7a4de95169c79202e44813885a8250&chksm=cf7f7017f808f9015689839fe4057fd418bf7b20eb1dfb5a28cd92e56a41b5605e62bfbc16fb&scene=21#wechat_redirect\" textvalue=\"1.\u642d\u5efa\u751f\u4fe1\u5206\u6790\u6d41\u6c34\u7ebf\uff0c\u5982\u5de5\u5382\u4e00\u683724\u5c0f\u65f6\u8fd0\u8f6cSnakemake\u2014\u2014\u8fdb\u9636\u547d\u4ee4\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"2\" rel=\"noopener\">1.\u642d\u5efa\u751f\u4fe1\u5206\u6790\u6d41\u6c34\u7ebf\uff0c\u5982\u5de5\u5382\u4e00\u683724\u5c0f\u65f6\u8fd0\u8f6cSnakemake\u2014\u2014\u8fdb\u9636\u547d\u4ee4<\/a><br 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textvalue=\"3.\u5bf9\u5355\u7ec6\u80de\u5206\u6790\u6beb\u65e0\u5934\u7eea\uff1f\u8ba9popsicleR\u9886\u4f60\u5165\u95e8\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"2\" rel=\"noopener\">3.\u5bf9\u5355\u7ec6\u80de\u5206\u6790\u6beb\u65e0\u5934\u7eea\uff1f\u8ba9popsicleR\u9886\u4f60\u5165\u95e8<\/a><\/section>\n<section style=\"letter-spacing: 0.578px;line-height: 1.75em;\"><a target=\"_blank\" href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg3OTg3MjQyNg==&mid=2247491905&idx=1&sn=fb34ebd6282962c7803badaee7a39096&chksm=cf7f7184f808f8929608c0050344ad86193d0fc6455c1c18e16cc17bf4b37832b63d3b18284e&scene=21#wechat_redirect\" textvalue=\"4.\u5c0f\u679c\u5e26\u4f60\u7ed8\u5236ROC\u66f2\u7ebf\u8bc4\u4f30\u751f\u5b58\u9884\u6d4b\u80fd\u529b\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"2\" rel=\"noopener\">4.\u5c0f\u679c\u5e26\u4f60\u7ed8\u5236ROC\u66f2\u7ebf\u8bc4\u4f30\u751f\u5b58\u9884\u6d4b\u80fd\u529b<\/a><\/section>\n<p><br \/><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<p style=\"text-align: center;\"><br \/><\/p>\n<\/section>\n<section powered-by=\"xiumi.us\" style=\"margin-bottom: 0px;letter-spacing: 0.578px;white-space: normal;\">\n<p style=\"text-align: center;\"><a target=\"_blank\" href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg3OTg3MjQyNg==&mid=2247493050&idx=2&sn=ee0643e61ad49d9da96fc5ead974bd8b&chksm=cf7f757ff808fc69c274f50b85b15bb7afae13df06337fb3cdc26bfb38fbc17b8bc48b37e65a&scene=21#wechat_redirect\" textvalue=\"\u4f60\u5df2\u9009\u4e2d\u4e86\u6dfb\u52a0\u94fe\u63a5\u7684\u5185\u5bb9\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"1\" rel=\"noopener\"><span class=\"js_jump_icon h5_image_link\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" 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