{"id":60103,"date":"2024-06-17T10:46:35","date_gmt":"2024-06-17T02:46:35","guid":{"rendered":"http:\/\/www.biocloudservice.com\/wordpress\/?p=60103"},"modified":"2024-06-17T10:46:35","modified_gmt":"2024-06-17T02:46:35","slug":"%e4%b8%80%e9%81%8d%e5%b0%b1%e4%bc%9a%ef%bc%81pophelper%e5%8c%85%e8%ae%a9%e7%be%a4%e4%bd%93%e9%81%97%e4%bc%a0%e7%a0%94%e7%a9%b6%e8%bd%af%e4%bb%b6structure%e7%9a%84%e8%be%93%e5%87%ba%e7%bb%93%e6%9e%9c-2","status":"publish","type":"post","link":"http:\/\/www.biocloudservice.com\/wordpress\/?p=60103","title":{"rendered":"\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765"},"content":{"rendered":"


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style=\"text-align: justify;\" powered-by=\"xiumi.us\">\n<p style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;background-color: rgb(255, 255, 255);\"><span style=\"font-size: 16px;\">\u516c\u4f17\u53f7\u540e\u53f0\u56de\u590d<span style=\"color: rgb(255, 41, 65);\">\u201c111\u201d<\/span>\u9886\u53d6\u672c\u7bc7\u4ee3\u7801\u3001\u57fa\u56e0\u96c6\u6216\u793a\u4f8b\u6570\u636e\u7b49\u6587\u4ef6\uff1b<\/span><\/p>\n<p style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;background-color: rgb(255, 255, 255);\"><span style=\"text-decoration: underline;color: rgb(255, 41, 65);font-size: 16px;\"><em><strong>\u6587\u4ef6\u7f16\u53f7\uff1a240115<\/strong><\/em><\/span><\/p>\n<p style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;background-color: rgb(255, 255, 255);\"><span style=\"font-size: 16px;\"><strong><span style=\"color: rgb(255, 41, 65);\">\u679c\u7c89\u798f\u5229<\/span><\/strong><span style=\"color: rgb(0, 128, 255);\"><strong>\uff1a\u751f\u4fe1\u4eba\u5fc5\u5907\u795e\u5668\u2014\u2014\u670d\u52a1\u5668<\/strong><\/span><br \/><\/span><\/p>\n<p style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;background-color: rgb(255, 255, 255);\"><span style=\"font-size: 16px;\">\u5e73\u65f6\u751f\u4fe1\u5206\u6790\u5b66\u4e60\u4e2d\u6709\u8981\u7684\u5c0f\u4f19\u4f34\u53ef\u4ee5\u8054\u7cfb\u5c0f\u679c\u79df\u8d41\uff0c\u7c89\u4e1d\u798f\u5229\u90fd\u662f\u5e02\u573a\u8d85\u4f4e\u4ef7\u683c\uff0c\u8d76\u5feb\u627e\u5c0f\u679c\u9886\u53d6\u514d\u8d39\u7684\u8bd5\u7528\u8d26\u53f7\u5427\uff01<\/span><\/p>\n<p style=\"margin-bottom: 0px;letter-spacing: 0.578px;text-wrap: wrap;font-size: 16px;background-color: rgb(255, 255, 255);\"><a target=\"_blank\" href=\"http:\/\/mp.weixin.qq.com\/s?__biz=Mzg3OTg3MjQyNg==&mid=2247495825&idx=2&sn=a22a72496a1c082ea5b827be94ce4d99&chksm=cf7f6054f808e94264e14bfed4359cab3fcaaca249952a9f761c37ece352dcd7108579788b89&scene=21#wechat_redirect\" textvalue=\"\u670d\u52a1\u5668\u4ef7\u683c\u914d\u7f6e\u8868\uff08\u70b9\u51fb\u94fe\u63a5\u67e5\u770b\uff09\" linktype=\"text\" imgurl=\"\" imgdata=\"null\" data-itemshowtype=\"0\" tab=\"innerlink\" data-linktype=\"2\" style=\"font-size: 16px;\" rel=\"noopener\"><span style=\"font-size: 16px;\">\u670d\u52a1\u5668\u4ef7\u683c\u914d\u7f6e\u8868\uff08\u70b9\u51fb\u94fe\u63a5\u67e5\u770b\uff09<\/span><\/a><br \/><\/p>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><br \/><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u6211\u4eec\u901a\u5e38\u4ee5\u5806\u53e0\u67f1\u72b6\u56fe\u7684\u5f62\u5f0f\u5c55\u793a\u7fa4\u4f53\u7ed3\u6784\u7ed3\u679c\uff0cpophelper\u5305\u5c31\u80fd\u5b9e\u73b0\u8be5\u8bc9\u6c42\uff0c\u4e14\u8fd8\u6709\u66f4\u591a\u7684\u51fd\u6570\u7b49\u5f85\u5927\u5bb6\u7684\u5f00\u53d1\u3002<\/span><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;color: rgb(196, 89, 17);\">\u4f46\u662f\u672c\u6b21\u4ecb\u7ecd\u7684R\u5305\u4f7f\u7528\u65f6\u8f83\u4e3a\u8017\u8d39\u7cfb\u7edf\u8d44\u6e90\uff0c\u5e76\u975e\u5f88\u5efa\u8bae\u5229\u7528\u7535\u8111\u8fd0\u884c\uff0c\u5e0c\u671b\u5927\u5bb6\u4f7f\u7528\u670d\u52a1\u5668\u8fd0\u884c\uff0c\u5982\u679c\u6ca1\u6709\u81ea\u5df1\u7684\u670d\u52a1\u5668\u6b22\u8fce\u8054\u7cfb\u6211\u4eec\u8fdb\u884c\u670d\u52a1\u5668\u79df\u8d41\u54e6~<\/span><\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;color: rgb(196, 89, 17);font-size: 16px;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015052\" data-ratio=\"0.38981481481481484\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/2_IWicymEetCc6Enf2BkUE4Yz1Ya5e5w.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAyuYsqlJnQUJvnS2iciaDibtfbdV0VmHlriaSjYwjFPLp1BLjokHIWicymEetCc6Enf2BkUE4Yz1Ya5e5w\/640?wx_fmt=png&wxfrom=5&wx_lazy=1&wx_co=1'\" data-w=\"1080\" \/><\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u4e0b\u9762\u8ba9\u6211\u4eec\u4e00\u8d77\u6765\u5b66\u4e60\u8fd9\u4e2a\u5389\u5bb3\u7684R\u5305\u5427\uff01\uff01\uff01<\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"php\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#R\u5305\u7684\u5b89\u88c5\uff081\uff09 <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">install.packages('devtools')<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">devtools::install('royfrancis\/pophelper')<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u5982\u679c\u51fa\u73b0\u4ee5\u4e0b\u62a5\u9519\uff0c\u53ef\u4ee5\u4f7f\u7528\u7b2c\u4e8c\u79cd\u5b89\u88c5\u65b9\u6cd5<\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015040\" data-ratio=\"0.09259259259259259\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/3_Lm2j4KzfTubnmpCk7cD8OsrRkRkiaA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvDWDlaoCbEQpgiasOiaBicibjiaRfbhLm2j4KzfTubnmpCk7cD8OsrRkRkiaA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1080\" height=\"51.19999694824219\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"sql\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#R\u5305\u7684\u5b89\u88c5\uff082\uff09<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">install.packages(c('ggplot2','gridExtra','label','switching','tidyr','remotes'),<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> repos = \"http:\/\/cloud.r-project.org\")<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u68c0\u67e5\u662f\u5426\u6210\u529f\u5b89\u88c5\uff0c\u5982\u679c\u6210\u529f\u5b89\u88c5\u53ef\u62a5pophelper\u7684\u7248\u672c\u4fe1\u606f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">library(pophelper)<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015042\" data-ratio=\"0.07162921348314606\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/4_IKdbBq5OnqTrMJehrPKbU5JQboQcJA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvlCEJwA99bDwNmt2D18eKYhYwIKdbBq5OnqTrMJehrPKbU5JQboQcJA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"712\" height=\"39.66998291015625\" width=\"553.739990234375\" \/><\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u4e0b\u9762\u8ba9\u6211\u4eec\u5f00\u59cb\u771f\u6b63\u4f7f\u7528\u8be5R\u5305\uff1a<\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"bash\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u9996\u5148\u8bbe\u7f6e\u5de5\u4f5c\u76ee\u5f55\uff0c\u6211\u7684structure\u7ed3\u679c\u6587\u4ef6\u88ab\u5b58\u50a8\u5728\u2018F:\u7fa4\u4f53\u9057\u4f20\u5b66\u4e602.\u7fa4\u4f53\u7ed3\u6784\u5206\u67902.5structure\u5206\u6790\u2019\u4e2d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">setwd('F:\\\u7fa4\u4f53\u9057\u4f20\u5b66\u4e60\\2.\u7fa4\u4f53\u7ed3\u6784\u5206\u6790\\2.5structure\u5206\u6790')<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u8bfb\u53d6\u6587\u4ef6\uff0c\u5c0f\u4f19\u4f34\u4eec\u5728\u505astructure\u65f6\u53ef\u77e5\uff0c\u5176\u8f93\u5165\u6587\u4ef6\u5982\u4e0b\uff0c\u56e0\u6b64\u4e3a\u907f\u514d\u91cd\u590d<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u4e66\u5199\u65e0\u7528\u4ee3\u7801\uff0c\u6211\u4eec\u5229\u7528\u5faa\u73af\u8fdb\u884c\u8f93\u5165<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015038\" data-ratio=\"0.835820895522388\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/5_W0gAMBbyYbSYw6B2EkaJGFaMBekEPg.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvoPiaBCLOdCjXvBUcHoI4ruUqKW0gAMBbyYbSYw6B2EkaJGFaMBekEPg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1072\" height=\"462.80999755859375\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"nginx\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">files <- list.files(path = '.', #\u6587\u4ef6\u8def\u5f84<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> pattern = '_f$', #\u4ee5_f\u7ed3\u5c3e\u7684\u6587\u4ef6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> full.names = F) #\u662f\u5426\u5c55\u793a\u8def\u5f84\u4fe1\u606f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">files #\u67e5\u770bfiles\u7684\u5185\u5bb9<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015039\" data-ratio=\"0.5117647058823529\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/6_1SeiaT2ytdQLVWXR5BnWwqibzLQrGA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0Jvko93wZN96ohG5j7vZJhZYzsRu41SeiaT2ytdQLVWXR5BnWwqibzLQrGA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"850\" height=\"283.3999938964844\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"typescript\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#Q\u77e9\u9635\u9605\u8bfb<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">slist <- readQ(files = files, #\u6587\u4ef6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabfromfile = T, #\u6587\u4ef6\u4e2d\u6bcf\u884c\u7684\u547d\u540d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> filetype = 'structure') #\u6587\u4ef6\u7c7b\u578bauto', 'structure','tess2','baps','basic' or 'clumpp'<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015041\" data-ratio=\"0.1925925925925926\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/7_2o9kQicewX6zdnEfXiaSHl8PF0ByEQ.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0Jvmw7WO2ZZMxnbsbogLM5peEpuK52o9kQicewX6zdnEfXiaSHl8PF0ByEQ\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"945\" height=\"106.66998291015625\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"nginx\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5bf9\u9f50<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">xlist <- alignK(slist)<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015045\" data-ratio=\"0.19850586979722518\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/8_fic9ZLdGfzszWfcM5hiaRRCHYtoFkw.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvYmJhwDE4RSoW4K3fsG4ruBr51Tfic9ZLdGfzszWfcM5hiaRRCHYtoFkw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"937\" height=\"109.94000244140625\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"nginx\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5408\u5e76\uff0c\u5171\u751f\u621011\u4e2a\u5217\u8868\u5f62\u5f0f\u7684\u6587\u4ef6\uff0c\u5bf9\u5e94\u4e00\u5f00\u59cb\u8bfb\u5165\u768411\u4e2ak\u503c\u6587\u4ef6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">xlist2 <- mergeQ(qlist)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5982\u679c\u62a5\u9519\u5982\u4e0b<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015043\" data-ratio=\"0.07183098591549296\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/9_7DywB3gjBOMm2DpoyvEjgUMSic7Ucg.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvcvoZP8FabUSJEAJjkdWicmk7Uu7DywB3gjBOMm2DpoyvEjgUMSic7Ucg\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"710\" height=\"39.80000305175781\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"php\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u9700\u8981\u5229\u7528\u4ee5\u4e0b\u51fd\u6570\u89e3\u51b3\uff0c\u53ef\u76f4\u63a5\u590d\u5236\uff0c\u4f46\u6b63\u5e38\u8f93\u51fa\u7684\u7ed3\u679c\u90fd\u53ef\u7528\u4e0a\u8ff0mergeQ\u8fdb\u884c\u5408\u5e76\uff0c\u5e94\u4e3aalignK\u7ee7\u800cmergeQ\u662f\u540c\u4e00\u4e2a\u51fd\u6570\u4e0b\u7684\u529f\u80fd\u4e14\u5e94\u7528\u987a\u5e8f\u7d27\u6328\u7740<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">mergy <- function(x) {<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">return(list(Reduce(`+`, x)\/length(x)))<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">}<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">fun1 <- function(x) as.matrix(unlist(attributes(x)))<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">a <- lapply(xlist, fun1)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">b <- as.data.frame(t(as.data.frame(lapply(a, function(x,y) x[y, ], \"k\"), stringAsFactors = FALSE)), stringsAsFactors = FALSE)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">fun2 <- function(x) if (all(!is.na(as.numeric(as.character(x))))) {<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">return(as.numeric(as.character(x)))<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">}else {<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">return(x)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">}<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">b <- as.data.frame(sapply(b, fun2), stringAsFactors = FALSE)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">ord <- order(b[, \"k\"])<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">qlist <- xlist[ord]<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">labels <- summariseQ(tabulateQ(qlist, sorttable = FALSE))$k<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">x <- unlist(lapply(splitQ(qlist), mergy), recursive = FALSE)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">names(x) <- labels<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">xlist2 <- as.qlist(x)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">xlist2<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015046\" data-ratio=\"0.3472222222222222\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/10_iaFB7rUwweydicsiajFhzfl08xrIuw.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0Jv3IzXu8yYYZCr17PHkAEwX7MhLxiciaFB7rUwweydicsiajFhzfl08xrIuw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1080\" height=\"192.07000732421875\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"nginx\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u968f\u540e\u8fdb\u884c\u56fe\u5f62\u7ed8\u5236<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">P1 <- plotQ(xlist2, #Q\u77e9\u9635<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u56fe\u7247\u5408\u5e76,\u56e0\u4e3a\u6211\u4eec\u8f93\u5165\u4e8611\u4e2a\u6587\u4ef6\u6240\u4ee5\u4e0d\u80fd\u9009\u7528sep(\u5355\u4e2a\u8f93\u51fa)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> imgoutput = \"join\", <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> imgtype = \"pdf\",#\u8f93\u51fa\u683c\u5f0f\"png\",\"jpeg\",\"tiff\" or \"pdf\".<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> width = 20,height = 1.2, #\u5bbd\u5ea6\u548c\u9ad8\u5ea6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> showindlab = T, #\u662f\u5426\u5bf9\u6bcf\u4e2aK\u503c\u56fe\u5f62\u7ed8\u5236\u8fb9\u6846<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> useindlab = T, #\u5c55\u793a\u5355\u682a\u6807\u7b7e<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabhjust = 0.5, #\u5355\u682a\u6807\u7b7e\u6c34\u5e73\u5c45\u4e2d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabangle = 0, #\u5355\u682a\u6807\u7b7e\u89d2\u5ea6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabsize = 1.2, #\u5355\u682a\u6807\u7b7e\u6587\u672c\u5927\u5c0f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> sortind = 'all', #\u6392\u5e8f\uff0c\u57fa\u4e8e\u805a\u7c7b\u6392\u5e8f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#K\u503c\u56fe\u4e0d\u4f1a\u5171\u4eab\u5355\u682a\u6807\u7b7e\u540d,\u4e14\u53ea\u5728 imgoutput = \"join\"\u65f6\u6709\u6548<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> sharedindlab = F, <\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> panelspacer = 0.02, #\u4e0d\u540ck\u503c\u56fe\u7684\u95f4\u9699<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabspacer = 0, #\u4e0d\u540ck\u503c\u56fe\u4e2d\u5355\u682a\u7a7a\u9699<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> indlabcol = \"black\", #k\u503c\u6587\u672c\u989c\u8272<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> showtitle = T,titlelab = \"\",titlecol = \"black\",titlehjust = 0.5, #\u6807\u9898<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> showsp = T,sppos = \"left\", #k\u503c\u6807\u7b7e\u5c55\u793a,\u4e5f\u6709\u2018right\u2019<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> splab = paste0(\"K=\",1:11), #k\u503c\u6807\u7b7e<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> splabangle = 180, #\u6807\u7b7e\u89d2\u5ea6<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> dpi = 600, #\u8f93\u51fa\u5206\u8fa8\u7387<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> outputfilename = paste0(\"structure1\"), #\u8f93\u51fa\u6587\u4ef6\u7684\u540d\u79f0<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> units = \"cm\", #\u8f93\u51fa\u6587\u4ef6\u7684\u5927\u5c0f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> exportplot = T, #\u56fe\u7247\u4fdd\u5b58<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> exportpath = getwd()) #\u4fdd\u5b58\u8def\u5f84<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5c4a\u65f6\u4f1a\u5728\u81ea\u5df1\u8bbe\u7f6e\u7684\u5de5\u4f5c\u76ee\u5f55\u4e0b\u51fa\u73b0\u540d\u4e3astructure1.pdf\u7684\u76ee\u6807\u6587\u4ef6<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\">  <\/span><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015047\" data-ratio=\"0.6366525423728814\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/11_YrsfAlqzVaL1GPQ3To0GDXtpXUWaoA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvzJcvaoGkvrmM5OpFk9icBYNbKYrsfAlqzVaL1GPQ3To0GDXtpXUWaoA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"944\" height=\"352.53997802734375\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"perl\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u6b64\u5916\u6211\u4eec\u8fd8\u53ef\u4ee5\u8fdb\u884c\u5206\u7ec4\u663e\u793a<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5f15\u5165\u5206\u7ec4\u4fe1\u606f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">pop <- read.table('group.txt', header = T, sep = 't', stringsAsFactors = F,row.names = 1)<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">pop<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;text-align: center;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015044\" data-ratio=\"2.9622641509433962\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/12_fNnAQOaBYTpTxJKgkTDNE59mtBQOGw.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0Jv3SVbIkxdkgEM8ic0pCGSFvZJpfNnAQOaBYTpTxJKgkTDNE59mtBQOGw\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"159\" height=\"471.010009765625\" width=\"159.0\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"xml\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">##\u7ed8\u56fe<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">P2 <- plotQ(xlist2,imgoutput = \"join\",<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">imgtype = \"png\", #\u8f93\u51fa\u683c\u5f0f\u7684\u53d8\u5316<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">height = 1.2,width = 20,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">showindlab = T,useindlab = T,sharedindlab = T,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">showsp = T,sppos = \"left\",splab = paste0(\"K=\",1:11),splabangle = 180,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> showlegend = F,ordergrp = T,grplab = pop, #\u6dfb\u52a0\u5206\u7ec4<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> subsetgrp = LETTERS[1:9], #\u6dfb\u52a0\u7ec4\u540d<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> dpi = 600,<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\"> outputfilename = paste0(\"structure_barplot_pop1\"),units = \"cm\",<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">exportpath = getwd())<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015049\" data-ratio=\"0.7\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/13_ca2AvxFGd7MBQlh0DM9NbEfJbwN1WA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0Jv3HHf4ticSxtxtUfKcSBuf7xHhica2AvxFGd7MBQlh0DM9NbEfJbwN1WA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1080\" height=\"387.3399963378906\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"xml\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u6b64\u65f6\u5df2\u7ecf\u53ef\u4ee5\u5728\u7ed3\u6784\u56fe\u4e0b\u9762\u770b\u5230\u5206\u7ec4\u4fe1\u606f<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><br \/><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u6700\u540e\u63a8\u65ad\u6700\u4f18\u7684\u5206\u7fa4\u6570\u76ee<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5229\u7528k\u503c\u53cadeltaK\u9753\u5217\u6570\u786e\u5b9a\u6700\u4f18k\u503c\uff0cdeltaK\u6700\u5927\u7684\u6700\u4f18<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">dt <- evannoMethodStructure(summariseQ(tabulateQ(slist,writetable = F,sorttable = T)),writetable = T,exportpath = getwd())<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u7b49\u7ebf;font-variant: normal;text-transform: none;font-size: 16px;\"><img decoding=\"async\" loading=\"lazy\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015048\" data-ratio=\"0.26296296296296295\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/14_VhuUFK9LibxnDXwibUicJoVLMWOjaA.png\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_png\/zcicibWZessAxPOe9tUFY5Qb6zia1UHx0JvVmqzKoMZbLqeGaI4pxCa7GJrMiarVhuUFK9LibxnDXwibUicJoVLMWOjaA\/640?wx_fmt=png'\" data-type=\"png\" data-w=\"1080\" height=\"145.47003173828125\" width=\"553.739990234375\" \/><\/span><\/section>\n<p><br \/><\/p>\n<section class=\"code-snippet__fix code-snippet__js\">\n<ul class=\"code-snippet__line-index code-snippet__js\">\n<li><\/li>\n<li><\/li>\n<\/ul>\n<pre class=\"code-snippet__js\" data-lang=\"bash\"><section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">#\u5199\u51fa\u6700\u4f18Q\u77e9\u9635,\u7b2c6\u4e2a\u662f\u6700\u4f18\u7684<\/span><\/span><\/code><code><span class=\"code-snippet_outer\"><span style=\"font-size: 16px;\">write.table(x = xlist2[[6]],file ='best_k6_Qscore',quote = F,sep = 't')<\/span><\/span><\/code><\/section><\/pre>\n<\/section>\n<p><span style=\"color: rgb(255, 0, 0);font-family: "Times New Roman";font-size: 16px;letter-spacing: 0.034em;\">       <\/span><o:p style=\"color: rgb(255, 0, 0);font-family: "Times New Roman";font-size: 16px;letter-spacing: 0.034em;\"> <\/o:p><br \/><\/p>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u90a3\u65e2\u7136\u5927\u5bb6\u5df2\u7ecf\u770b\u5230\u4e86\u8fd9\u91cc\uff0c\u76f8\u4fe1\u4f60\u4eec\u4e5f\u662f\u5b8c\u7f8e\u7684\u8fdb\u884c\u4e86\u590d\u73b0\uff0c\u90a3\u54b1\u4eec\u73b0\u5728\u5c31\u5bf9\u7ed3\u679c\u56fe\u8fdb\u884c\u8be6\u7ec6\u7684\u89e3\u91ca\u5427\uff01<\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u54b1\u4eec\u628a\u5e26\u6709\u5206\u7ec4\u4fe1\u606f\u7684P2\u5f53\u505a\u6700\u540e\u7684\u7ed3\u679c\u56fe\uff0c\u4ece\u4e0b\u5f80\u4e0a\u770b\u5462\uff0c\u9996\u5148\u53ef\u4ee5\u770b\u5230A-I\u76849\u4e2a\u5206\u7ec4\uff0c\u800c\u5728\u8fd99\u4e2a\u5206\u7ec4\u7684\u8303\u56f4\u4e4b\u5185\u5747\u6709\u4ee5R\u5f00\u5934\u7684\u83cc\u682a\u5b58\u5728\uff0c\u5176\u5b9e\u8fd9\u662f\u5c0f\u679c\u81ea\u5df1\u5bf9\u6837\u54c1\u8fdb\u884c\u7684\u5206\u7ec4\u54e6\uff0c\u5927\u5bb6\u5982\u679c\u60f3\u8981\u6539\u53d8\u7684\u8bdd\u4e5f\u662f\u53ef\u4ee5\u7684\u554a\u3002\u8fd9\u4e2a\u5206\u7ec4\u53ef\u4ee5\u6839\u636e\u5927\u5bb6\u7684\u5b9e\u9a8c\u6765\u51b3\u5b9a\u54e6\uff0c\u6bd4\u5982\u4e0d\u540c\u7684\u91c7\u6837\u65f6\u95f4\u3001\u4e0d\u540c\u7684\u91c7\u6837\u5730\u70b9\u6216\u540c\u4e00\u5c5e\u7684\u4e0d\u540c\u79cd\u6837\u54c1\u90fd\u662f\u53ef\u4ee5\u7684\u3002<\/span>    <\/span><o:page><\/o:page><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u7136\u540e\u5927\u5bb6\u7ee7\u7eed\u5411\u4e0a\u770b\uff0c\u53ef\u4ee5\u53d1\u73b0\u5171\u670911\u4e2a\u957f\u65b9\u5f62\u7684\u5806\u53e0\u67f1\u5f62\u56fe\uff0c\u8fd9\u5bf9\u5e94\u7740\u5728\u4e00\u5f00\u59cb\u65f6\u8f93\u5165\u768411\u4e2a\u5206\u7c7b\u4fe1\u606f\uff0c\u5373\u5206\u522b\u5047\u8bbe\u8fd990\u4e2a\u6837\u54c1\u5206\u4e3a1\u30012\u30013\u3001\u2026\u2026\u300111\u4e2a\u7fa4\u4f53\u8fdb\u884c\u8ba1\u7b97\uff0c\u6bcf\u4e2a\u8ba1\u7b973\u6b21\uff0c\u4ee5\u6b64\u8ba1\u7b97deltaK\u503c\uff0c\u6240\u83b7\u5f97\u7684deltaK\u503c\u8d8a\u5927\uff0c\u8bf4\u660e\u8be5\u503c\u5bf9\u5e94\u7684K\u5373\u79cd\u7fa4\u6570\u8d8a\u53ef\u4fe1\uff0c\u5982\u4ee5\u4e0a\u6570\u636e\u663e\u793a\u5f53K=6\u65f6deltaK\u8fbe\u5230\u4e8620000+\uff0c\u8fdc\u8fdc\u9ad8\u4e8e\u5176\u4f59\u7ec4\u7684deltaK\u503c\uff0c\u56e0\u6b64\u5c0f\u679c\u53ef\u4ee5\u8ba4\u4e3a\u8fd9\u662f\u6700\u4f18\u7684\u5206\u7fa4\u6570\u3002<\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;font-size: 16px;\">\u5728\u6b64\u60c5\u51b5\u4e4b\u4e0b\uff0c\u6211\u4eec\u5c06\u76ee\u5149\u4e0a\u4e0b\u79fb\u52a8\u5206\u522b\u67e5\u770bK\u4e3a5\u548c7\u65f6\u7684\u5206\u7fa4\u72b6\u51b5\u3002\u5f53K=5\u65f6\uff0c\u4e0eK=6\u76f8\u6bd4\u5728E\u3001G\u3001H\u4e2d\u6709\u8f83\u5927\u53d8\u5316\uff0c\u5373\u51fa\u73b0\u4e86\u4ee5\u6a59\u8272\u4e3a\u4ee3\u8868\u7684\u4e00\u4e2a\u5c0f\u79cd\u7fa4\uff0c\u65e2\u7136K=6\u624d\u662f\u6700\u6709\u60c5\u51b5\uff0c\u5219\u53ef\u4ee5\u8bf4\u660e\u5728\u8fd9\u4e09\u4e2a\u5c0f\u7fa4\u4f53\u4e4b\u95f4\uff0c\u5df2\u7ecf\u53d1\u751f\u4e86\u751f\u6b96\u9694\u79bb\u7b49\u6761\u4ef6\u4f7f\u5f97\u65b0\u79cd\u7fa4\u6b63\u5728\u9010\u6e10\u5f62\u6210\u3002\u800c\u5f53K=7\u65f6\uff0c\u9664\u53bb\u989c\u8272\u5f71\u54cd\uff0c\u5176\u5b9e\u5e76\u6ca1\u6709\u592a\u5927\u7684\u53d8\u5316\u3002\u5373\u8fd9\u4e2a\u56fe\u4e3b\u8981\u662f\u5c55\u793a\u67d0\u4e2a\u7fa4\u4f53\u3001\u67d0\u4e00\u4e9b\u6837\u54c1\u662f\u5426\u4e3a\u4e00\u7c7b\u6837\u54c1\uff0c\u6216\u770b\u67d0\u4e2a\u6837\u54c1\u662f\u4ece\u54ea\u91cc\u8fdb\u5316\u800c\u6765\u3002<\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\"><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;\">\u4ee5\u4e0a\u6240\u5199\u5185\u5bb9\u5c31\u662f\u672c\u671f\u5c0f\u679c\u5e26\u5927\u5bb6\u4e00\u8d77\u5b66\u4e60\u7684pophelper\u5305\u7684\u5168\u90e8\u5185\u5bb9\u5566\uff0c\u5176\u5b9e\u8be5\u5305\u5185\u5bb9\u6781\u5176\u5f3a\u5927\uff0c\u51fd\u6570\u6570\u91cf\u8fdc\u4e0d\u4ec5\u5982\u6b64\uff0c\u5982\u679c\u5c0f\u4f19\u4f34\u4eec\u89c9\u5f97\u8fd8\u60f3\u8fdb\u884c\u5b66\u4e60\u7684\u8bdd\uff0c\u5c31\u8bf7\u8d76\u5feb\u52a0\u5165\u6211\u4eec\u628a\uff01\uff01<\/span><span style=\"font-family: \u5b8b\u4f53;font-variant: normal;text-transform: none;color: rgb(196, 89, 17);\">\u8be5\u51fd\u6570\u53ca\u4ee3\u7801\u7684\u786e\u7e41\u590d\u590d\u6742\uff0c\u5982\u679c\u5404\u4f4d\u5c0f\u4f19\u4f34\u89c9\u5f97\u6570\u636e\u6709\u95ee\u9898\u6216\u662f\u4ee3\u7801\u8fd0\u884c\u4e0d\u8d77\u6765\uff0c\u53ef\u4ee5\u8bd5\u8bd5\u5c0f\u679c\u81ea\u5df1\u7684\u4e91\u751f\u4fe1\u5c0f\u7a0b\u5e8f\u54e6\uff0c\u91cc\u9762\u6709\u5bf9\u591a\u79cd\u6570\u636e\u8fdb\u884c\u5904\u7406\u53ca\u53ef\u89c6\u5316\u7684\u6210\u719f\u4ee3\u7801\uff0c\u53ea\u9700\u8981\u52a8\u52a8\u624b\u6307\u5c31\u80fd\u76f4\u63a5\u51fa\u56fe\uff0c\u800c\u4e14\u8fd8\u63a5\u53d7\u989c\u8272\u3001\u5b57\u4f53\u7b49\u4e2a\u6027\u5316\u5b9a\u5236\u54e6\uff0c\u6709\u9700\u8981\u7684\u5c0f\u4f19\u4f34\u53ef\u4ee5\u70b9\u51fb\u4e0b\u65b9\u94fe\u63a5\u5427\uff01\uff01<\/span><\/span><\/section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><span style=\"font-size: 16px;\"><span style=\"font-family: "Times New Roman";font-variant: normal;text-transform: none;color: rgb(196, 89, 17);\">http:\/\/www.biocloudservice.com\/home.html<\/span>  <\/span><\/section>\n<section powered-by=\"xiumi.us\" style=\"margin-bottom: 0px;\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section powered-by=\"xiumi.us\">\n<section>\n<section>\n<section style=\"margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-galleryid=\"\" data-imgfileid=\"100015054\" data-ratio=\"0.5555555555555556\" data-s=\"300,640\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/15_VmRkv7tSNKliafDnsuFR7BoeDgBrww.jpg\" onerror=\"this.src='https:\/\/mmbiz.qpic.cn\/sz_mmbiz_jpg\/zcicibWZessAxPqeNQsFjm2HibIuSld9Nh9GicQSWhJwHjia5tEevQvDIebLErVmRkv7tSNKliafDnsuFR7BoeDgBrww\/640?wx_fmt=jpeg&from=appmsg'\" data-type=\"jpeg\" data-w=\"900\" style=\"font-size: var(--articleFontsize);letter-spacing: 0.034em;\" \/><br \/><\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<\/section>\n<section style=\"margin-left: 0pt;letter-spacing: 0.578px;text-indent: 0pt;text-wrap: wrap;text-align: justify;font-size: 12pt;font-family: helvetica;color: rgb(0, 0, 0);break-after: auto;margin-top: 8px;margin-bottom: 0px;line-height: 1.6em;\"><img decoding=\"async\" class=\"rich_pages wxw-img\" data-imgfileid=\"100015053\" data-ratio=\"0.38981481481481484\" data-s=\"300,640\" src=\"\u56fe\u7247\/\u751f\u4fe1\u679c_2024-01-15_\u4e00\u904d\u5c31\u4f1a\uff01pophelper\u5305\u8ba9\u7fa4\u4f53\u9057\u4f20\u7814\u7a76\u8f6f\u4ef6structure\u7684\u8f93\u51fa\u7ed3\u679c\u201c\u6d3b\u201d\u8d77\u6765\/16_FbEg9fibwQicL8l2ExKOZZTmAHXabQ.png\" 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