{"id":65552,"date":"2026-10-11T17:00:00","date_gmt":"2026-10-11T09:00:00","guid":{"rendered":"https:\/\/www.biocloudservice.com\/wordpress\/?p=65552"},"modified":"2026-10-06T13:35:25","modified_gmt":"2026-10-06T05:35:25","slug":"reviewer-reproducibility","status":"publish","type":"post","link":"https:\/\/www.biocloudservice.com\/wordpress\/reviewer-reproducibility\/","title":{"rendered":"\u5ba1\u7a3f\u4eba\u8981\u539f\u59cb\u6570\u636e\u548c\u4ee3\u7801\uff1a\u8fd4\u4fee\u65f6\u8be5\u4ea4\u54ea\u4e9b\u6587\u4ef6\uff1f"},"content":{"rendered":"<p>\u5ba1\u7a3f\u4eba\u5199\u201cPlease make the data and analysis code available\u201d\uff0c\u4e0d\u4e00\u5b9a\u662f\u5728\u8981\u6c42\u628a\u7535\u8111\u91cc\u6574\u4e2a\u9879\u76ee\u76ee\u5f55\u6253\u5305\u53d1\u8fc7\u53bb\u3002\u4e00\u4e2a\u585e\u6ee1 old\u3001final\u3001final2 \u7684\u538b\u7f29\u5305\uff0c\u6587\u4ef6\u518d\u591a\uff0c\u4e5f\u53ef\u80fd\u6ca1\u4eba\u80fd\u590d\u73b0\u51fa\u8bba\u6587\u91cc\u7684\u56fe\u3002\u5148\u628a\u8bfb\u8005\u9700\u8981\u8d70\u901a\u7684\u8def\u5f84\u7406\u6e05\u695a\u3002<\/p>\n<h2 id=\"section-1\">\u4ece\u8bba\u6587\u91cc\u6700\u91cd\u8981\u7684\u4e00\u5f20\u56fe\u5f00\u59cb\u6574\u7406<\/h2>\n<figure style=\"margin:28px 0\"><a href=\"https:\/\/www.biocloudservice.com\/revision-assistant\/assets\/diagrams\/reproducibility.svg\" target=\"_blank\" rel=\"noopener\"><img decoding=\"async\" src=\"https:\/\/www.biocloudservice.com\/revision-assistant\/assets\/diagrams\/reproducibility.svg\" alt=\"\u8ba9\u522b\u4eba\u6cbf\u7740\u56db\u4ef6\u4e1c\u897f\u627e\u56de\u7ed3\u679c\uff1a\u8f93\u5165\u4e0e\u8bf4\u660e\uff0c\u6587\u4ef6\u6e05\u5355\u3001\u6765\u6e90\u4e0e\u6743\u9650\uff1b\u73af\u5883\u4e0e\u7248\u672c\uff0c\u8f6f\u4ef6\u3001\u4f9d\u8d56\u3001\u6570\u636e\u5e93\uff1b\u811a\u672c\u4e0e\u53c2\u6570\uff0c\u987a\u5e8f\u3001\u8def\u5f84\u4e0e\u968f\u673a\u79cd\u5b50\uff1b\u8f93\u51fa\u4e0e\u5b9a\u4f4d\uff0c\u56fe\u8868\u5bf9\u5e94\u5177\u4f53\u547d\u4ee4\" width=\"960\" height=\"610\" loading=\"lazy\" style=\"width:100%;height:auto;border-radius:16px\"><\/a><figcaption style=\"font-size:13px;color:#637982\">\u8ba9\u522b\u4eba\u6cbf\u7740\u56db\u4ef6\u4e1c\u897f\u627e\u56de\u7ed3\u679c\u3002\u65b9\u6cd5\u793a\u610f\uff0c\u4e0d\u662f\u5b9e\u9a8c\u7ed3\u679c\u3002\u70b9\u51fb\u53ef\u653e\u5927\u3002<\/figcaption><\/figure>\n<p>\u95ee\u81ea\u5df1\u56db\u4e2a\u95ee\u9898\uff1a\u8fd9\u5f20\u56fe\u8bfb\u4e86\u54ea\u4e2a\u8f93\u5165\u6587\u4ef6\uff1f\u5728\u54ea\u4e2a\u8f6f\u4ef6\u73af\u5883\u91cc\u8fd0\u884c\uff1f\u4f7f\u7528\u54ea\u6761\u547d\u4ee4\u548c\u54ea\u4e9b\u53c2\u6570\uff1f\u4ea7\u7269\u4fdd\u5b58\u5230\u54ea\u91cc\uff1f\u5982\u679c\u53ea\u80fd\u9760\u5206\u6790\u4eba\u5458\u53e3\u5934\u89e3\u91ca\uff0cREADME \u8fd8\u4e0d\u5b8c\u6574\u3002\u5148\u8d70\u901a\u4e00\u6761\u4e3b\u7ebf\uff0c\u518d\u628a\u5176\u4ed6\u56fe\u8868\u63a5\u8fdb\u6765\u3002<\/p>\n<div class=\"revision-table\" style=\"margin:24px 0\" role=\"region\" aria-label=\"\u6700\u5c0f\u590d\u73b0\u5305\u6587\u4ef6\u6e05\u5355\uff08\u6309\u9879\u76ee\u5b9e\u9645\u5220\u6539\uff09\" tabindex=\"0\">\n<table style=\"width:100%;min-width:570px;border-collapse:collapse;font-size:14px;line-height:1.8\">\n<caption style=\"text-align:left;padding:0 0 12px;font-weight:600\">\u6700\u5c0f\u590d\u73b0\u5305\u6587\u4ef6\u6e05\u5355\uff08\u6309\u9879\u76ee\u5b9e\u9645\u5220\u6539\uff09<\/caption>\n<thead>\n<tr>\n<th scope=\"col\" style=\"padding:14px;text-align:left;background:#173d4a;color:white;border:1px solid #d6e3e2\">\u6750\u6599<\/th>\n<th scope=\"col\" style=\"padding:14px;text-align:left;background:#173d4a;color:white;border:1px solid #d6e3e2\">\u5e94\u5305\u542b\u4ec0\u4e48<\/th>\n<th scope=\"col\" style=\"padding:14px;text-align:left;background:#173d4a;color:white;border:1px solid #d6e3e2\">\u63d0\u4ea4\u524d\u68c0\u67e5<\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">README<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u7814\u7a76\u4efb\u52a1\u3001\u6587\u4ef6\u8bf4\u660e\u3001\u8fd0\u884c\u987a\u5e8f\u3001\u9884\u8ba1\u8d44\u6e90\u7684\u5b9e\u6d4b\u6216\u4f30\u8ba1\u4f9d\u636e<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u65b0\u540c\u5b66\u80fd\u5426\u627e\u5230\u7b2c\u4e00\u6b65<\/td>\n<\/tr>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u8f93\u5165\u7d22\u5f15<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u6570\u636e\u7f16\u53f7\u3001\u6587\u4ef6\u540d\u3001\u6837\u672c\u5bf9\u5e94\u8868\u548c\u8bbf\u95ee\u65b9\u5f0f<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u4e0d\u66b4\u9732\u60a3\u8005\u8eab\u4efd\u3001\u5bc6\u94a5\u6216\u5ba1\u9605\u53e3\u4ee4<\/td>\n<\/tr>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u73af\u5883\u8bb0\u5f55<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">R\/Python\u3001\u4f9d\u8d56\u5305\u3001\u8f6f\u4ef6\u548c\u53c2\u8003\u6570\u636e\u5e93\u7248\u672c<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u4e0d\u662f\u53ea\u5199\u201c\u4f7f\u7528\u6700\u65b0\u7248\u201d<\/td>\n<\/tr>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u5206\u6790\u811a\u672c<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u4ece\u8f93\u5165\u5230\u7ed3\u679c\u7684\u6b65\u9aa4\u3001\u53c2\u6570\u3001\u968f\u673a\u8bbe\u7f6e<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u65e0\u79c1\u4eba\u7edd\u5bf9\u8def\u5f84\u548c\u8d26\u6237\u5bc6\u7801<\/td>\n<\/tr>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u8f93\u51fa\u6620\u5c04<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">Figure\/Table \u5bf9\u5e94\u811a\u672c\u53ca\u7ed3\u679c\u6587\u4ef6<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u4e0e\u8fd4\u4fee\u7a3f\u7f16\u53f7\u4e00\u81f4<\/td>\n<\/tr>\n<tr>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u6570\u636e\u53ef\u83b7\u5f97\u58f0\u660e<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u516c\u5f00\u94fe\u63a5\u3001\u53d7\u63a7\u8bbf\u95ee\u6761\u4ef6\u6216\u5177\u4f53\u9650\u5236<\/td>\n<td style=\"padding:14px;border:1px solid #d6e3e2;vertical-align:top\">\u4e0d\u627f\u8bfa\u5b9e\u9645\u4e0a\u65e0\u6cd5\u63d0\u4f9b\u7684\u5185\u5bb9<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n<p>\u5bb9\u5668\u6216\u9501\u5b9a\u4f9d\u8d56\u80fd\u5e2e\u52a9\u4fdd\u5b58\u73af\u5883\uff0c\u4f46\u4e0d\u5fc5\u4e00\u4e0a\u6765\u8ffd\u6c42\u5e9e\u5927\u7684\u5de5\u7a0b\u65b9\u6848\u3002\u5148\u4fdd\u8bc1\u6838\u5fc3\u811a\u672c\u3001\u7248\u672c\u548c\u6267\u884c\u8bf4\u660e\u51c6\u786e\u3002\u5927\u4efb\u52a1\u53ef\u4ee5\u63d0\u4f9b\u7ecf\u8fc7\u8bf4\u660e\u7684\u5c0f\u89c4\u6a21\u6f14\u793a\u8f93\u5165\u7528\u4e8e\u68c0\u67e5\u8fd0\u884c\u6d41\u7a0b\uff0c\u4f46\u5fc5\u987b\u6807\u660e\u5b83\u4e0d\u80fd\u590d\u73b0\u4e3b\u7814\u7a76\u7684\u7edf\u8ba1\u7ed3\u8bba\u3002<\/p>\n<h2 id=\"section-5\">\u516c\u5f00\u6570\u636e\u5e93\u3001\u5ba1\u9605\u8bbf\u95ee\u3001\u53d7\u63a7\u6570\u636e\u662f\u4e09\u79cd\u60c5\u51b5<\/h2>\n<p>\u5f15\u7528\u516c\u5171\u6570\u636e\uff0c\u8bb0\u5f55\u51c6\u786e\u7684\u6570\u636e\u7f16\u53f7\u3001\u6765\u6e90\u3001\u4e0b\u8f7d\u65e5\u671f\u548c\u5904\u7406\u65b9\u5f0f\u3002\u63d0\u4ea4\u81ea\u5df1\u7684\u6570\u636e\uff0c\u5219\u6309\u5bf9\u5e94\u5e93\u8981\u6c42\u6574\u7406\u539f\u59cb\u6570\u636e\u3001\u5904\u7406\u540e\u6570\u636e\u53ca\u5fc5\u8981\u5143\u4fe1\u606f\uff1b\u4e0d\u540c\u6570\u636e\u7c7b\u578b\u8981\u6c42\u4e0d\u540c\uff0c\u4e0d\u80fd\u53ea\u4e0a\u4f20\u4e00\u5f20\u5dee\u5f02\u57fa\u56e0\u8868\u5c31\u9ed8\u8ba4\u5b8c\u6210\u5f52\u6863\u3002<\/p>\n<p>GEO \u63d0\u4f9b\u4f9b\u5ba1\u7a3f\u4eba\u8bbf\u95ee\u5c1a\u672a\u516c\u5f00\u8bb0\u5f55\u7684\u673a\u5236\uff0c\u53ef\u4ee5\u6309\u5176\u8bf4\u660e\u751f\u6210\u5ba1\u9605\u8bbf\u95ee\u51ed\u636e\u3002\u5b83\u7684\u7528\u9014\u662f\u5ba1\u9605\u76f8\u5e94\u8bb0\u5f55\uff0c\u4e0d\u4ee3\u8868\u6240\u6709\u76f8\u5173\u539f\u59cb\u5e8f\u5217\u6587\u4ef6\u7684\u8bbf\u95ee\u90fd\u81ea\u52a8\u89e3\u51b3\u3002\u4e0d\u8981\u628a\u79c1\u5bc6 token \u5199\u8fdb\u516c\u5f00\u535a\u5ba2\u3001\u4ee3\u7801\u4ed3\u5e93\u6216\u516c\u5f00\u7248\u672c\u7684 README\u3002<\/p>\n<p>\u6d89\u53ca\u60a3\u8005\u3001\u9057\u4f20\u6216\u5176\u4ed6\u9650\u5236\u6570\u636e\u65f6\uff0c\u4e0d\u80fd\u4e3a\u4e86\u8fd4\u4fee\u65b9\u4fbf\u5c31\u4e0a\u4f20\u516c\u5f00\u7f51\u76d8\u3002\u5148\u8bf7\u5355\u4f4d\u7684\u6570\u636e\u7ba1\u7406\u3001\u4f26\u7406\u6216\u5408\u89c4\u8d1f\u8d23\u4eba\u786e\u8ba4\u5141\u8bb8\u63d0\u4f9b\u4ec0\u4e48\u3001\u5411\u8c01\u63d0\u4f9b\u3001\u4ee5\u4f55\u79cd\u65b9\u5f0f\u63d0\u4f9b\uff0c\u518d\u6309\u671f\u520a\u548c\u6570\u636e\u4ed3\u5e93\u653f\u7b56\u5199\u58f0\u660e\u3002\u8fd9\u91cc\u63d0\u4f9b\u6587\u4ef6\u6574\u7406\u5efa\u8bae\uff0c\u4e0d\u5224\u65ad\u67d0\u4e00\u9879\u76ee\u7684\u5177\u4f53\u5171\u4eab\u8bb8\u53ef\u3002<\/p>\n<h2 id=\"section-9\">\u7ed9\u56de\u590d\u4fe1\u4e00\u4e2a\u660e\u786e\u5165\u53e3<\/h2>\n<blockquote style=\"border-left:3px solid #008078;background:#f0f7f6;padding:20px 24px\">\n<p lang=\"en\">We have prepared the reproducibility materials at [approved repository\/link or access route]. The package includes [actual files], environment information and instructions mapping [figures\/tables] to the corresponding scripts. Access to [restricted data, if any] is subject to [actual conditions and contact route]. Reviewer access details are provided through [the journal-approved non-public channel].<\/p>\n<\/blockquote>\n<p style=\"font-size:13px;color:#61747c\">\u8fd9\u662f\u53ef\u4fee\u6539\u7684\u5199\u4f5c\u6846\u67b6\uff0c\u4e0d\u662f\u5bf9\u4f60\u7684\u7814\u7a76\u7ed3\u679c\u7684\u9648\u8ff0\uff1b\u672a\u5b8c\u6210\u7684\u5de5\u4f5c\u4e0d\u5f97\u5199\u6210\u5df2\u5b8c\u6210\u3002<\/p>\n<p>\u6ca1\u6709\u4e0a\u4f20\u6210\u529f\uff0c\u5c31\u4e0d\u8981\u5199\u201cavailable\u201d\u3002\u9700\u8981\u7533\u8bf7\u8bbf\u95ee\u7684\u6570\u636e\uff0c\u4e5f\u4e0d\u8981\u63cf\u8ff0\u6210\u201cfreely accessible\u201d\u3002\u5728\u63d0\u4ea4\u524d\u8ba9\u4e00\u4f4d\u672a\u53c2\u4e0e\u5206\u6790\u7684\u540c\u4e8b\u4ece README 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