{"id":69938,"date":"2026-11-14T22:11:55","date_gmt":"2026-11-14T14:11:55","guid":{"rendered":"https:\/\/www.biocloudservice.com\/wordpress\/?p=69938"},"modified":"2026-11-14T22:11:55","modified_gmt":"2026-11-14T14:11:55","slug":"baysor-molecule-assignment-cell-radius-background","status":"publish","type":"post","link":"https:\/\/www.biocloudservice.com\/wordpress\/baysor-molecule-assignment-cell-radius-background\/","title":{"rendered":"Baysor \u5206\u51fa\u4e5d\u679a\u7ec6\u80de\u5c31\u7b97\u6b63\u786e\u5417\uff1f\u6cbf\u4e94\u767e\u4e00\u5341\u516b\u4e2a\u5206\u5b50\u590d\u6838\u5f52\u5c5e"},"content":{"rendered":"
\n

\u505a\u539f\u4f4d\u8f6c\u5f55\u7ec4\u5206\u5272\u65f6\uff0c\u56e2\u961f\u7ecf\u5e38\u5148\u770b\u5f69\u8272\u7ec6\u80de\u56fe\uff0c\u518d\u6838\u5bf9\u68c0\u6d4b\u51fa\u7684\u7ec6\u80de\u603b\u6570\u3002\u8fd9\u4e2a\u987a\u5e8f\u5f88\u5bb9\u6613\u6f0f\u6389\u4e00\u79cd\u60c5\u51b5\uff0c\u7ec6\u80de\u6570\u5b8c\u5168\u76f8\u540c\uff0c\u8fb9\u7f18\u5904\u7684\u8f6c\u5f55\u672c\u5374\u88ab\u5206\u7ed9\u4e86\u4e0d\u540c\u5bf9\u8c61\u3002\u4e00\u4e2a\u514d\u75ab\u6807\u8bb0\u5982\u679c\u53ea\u5728\u67d0\u7c7b\u7ec6\u80de\u4e2d\u591a\u51fa\u51e0\u4e2a\u5206\u5b50\uff0c\u6700\u540e\u5199\u6210\u65b0\u8868\u8fbe\u72b6\u6001\u8fd8\u662f\u90bb\u8fd1\u7ec6\u80de\u4fe1\u53f7\uff0c\u5f88\u53ef\u80fd\u5c31\u53d6\u51b3\u4e8e\u8fd9\u51e0\u6b21\u5206\u914d\u3002\u6211\u4eec\u7528\u4e5d\u56e2\u5df2\u77e5\u6765\u6e90\u7684\u5206\u5b50\u548c\u4e94\u5341\u4e2a\u80cc\u666f\u5206\u5b50\u5b9e\u8dd1 Baysor\uff0c\u6539\u53d8\u5047\u5b9a\u7684\u7ec6\u80de\u5c3a\u5ea6\uff0c\u770b\u8ba1\u6570\u3001\u5206\u5b50\u7ea7\u8bef\u5206\u548c\u80cc\u666f\u5438\u6536\u600e\u6837\u5206\u522b\u53d8\u5316\u3002Baysor \u539f\u59cb\u65b9\u6cd5<\/a><\/p>\n

\u628a\u7ec6\u80de\u8fb9\u754c\u95ee\u9898\u6362\u6210\u4e00\u5f20\u5206\u5b50\u5f52\u5c5e\u8868<\/h2>\n

\u8f93\u5165\u8868\u901a\u5e38\u4ee5\u6bcf\u4e2a\u68c0\u6d4b\u5230\u7684\u8f6c\u5f55\u672c\u4e3a\u4e00\u884c\uff0c\u81f3\u5c11\u9700\u8981\u5e73\u9762\u5750\u6807\u548c\u57fa\u56e0\u540d\u3002\u8fd9\u91cc\u7684\u201c\u5206\u5b50\u201d\u662f\u68c0\u6d4b\u6d41\u7a0b\u4ea4\u7ed9\u5206\u5272\u7a0b\u5e8f\u7684\u8bb0\u5f55\uff0c\u4e0d\u80fd\u628a\u540c\u4e00\u7ec6\u80de\u540c\u4e00\u57fa\u56e0\u5148\u6c42\u548c\u6210\u4e00\u884c\uff0c\u518d\u6307\u671b\u6a21\u578b\u8fd8\u539f\u7a7a\u95f4\u4f4d\u7f6e\u3002\u5f00\u59cb\u524d\u5e94\u4fdd\u7559\u5206\u5b50\u6807\u8bc6\u3001\u5750\u6807\u5355\u4f4d\u3001\u5207\u7247\u6216\u89c6\u91ce\u5f52\u5c5e\u4ee5\u53ca\u8d28\u91cf\u8fc7\u6ee4\u8bb0\u5f55\u3002\u6bcf\u4efd\u6570\u636e\u53ea\u8981\u80fd\u8ddf\u8e2a\u5230\u539f\u59cb\u5206\u5b50\uff0c\u5c31\u80fd\u95ee\u67d0\u4e9b\u5206\u5b50\u662f\u5728\u6362\u8fb9\u754c\u540e\u5f52\u5c5e\u6539\u53d8\u3001\u88ab\u5217\u4f5c\u80cc\u666f\uff0c\u8fd8\u662f\u5efa\u6a21\u524d\u5c31\u56e0\u8d28\u91cf\u88ab\u8fc7\u6ee4\u51fa\u53bb\u3002\u53ea\u4fdd\u7559\u6700\u7ec8\u7ec6\u80de\u4e58\u57fa\u56e0\u8ba1\u6570\u77e9\u9635\uff0c\u8fd9\u4e09\u79cd\u60c5\u51b5\u5c31\u96be\u4ee5\u533a\u5206\u3002<\/p>\n

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\u5b9e\u8dd1\u7ecf\u9a8c\uff5c\u603b\u6570\u4e0d\u52a8\uff0c\u5206\u5b50\u8fd8\u80fd\u600e\u6837\u6362\u5f52\u5c5e<\/h2>\n

\u6211\u4eec\u5b89\u88c5\u5e76\u6821\u9a8c\u539f\u4f5c\u8005\u53d1\u5e03\u7684 Windows C++ \u7248\u672c Baysor 0.9.0\u3002\u8f93\u5165\u79cd\u5b50\u56fa\u5b9a\u4e3a\u4e09\u5341\u4e03\uff0c\u4e5d\u4e2a\u4e2d\u5fc3\u6309\u4e09\u884c\u4e09\u5217\u6392\u5e03\uff0c\u6700\u8fd1\u4e2d\u5fc3\u95f4\u8ddd\u5341\u56db\u4e2a\u5750\u6807\u5355\u4f4d\u3002\u6bcf\u4e2a\u4e2d\u5fc3\u751f\u6210\u4e94\u5341\u4e8c\u4e2a\u4f4d\u7f6e\u7565\u6709\u6ce2\u52a8\u7684\u5206\u5b50\uff0c\u4e5d\u4e2a\u57fa\u56e0\u4e2d\u6709\u82e5\u5e72\u5728\u5404\u4e2d\u5fc3\u504f\u597d\u51fa\u73b0\u3002\u518d\u5c06\u4e94\u5341\u4e2a\u5747\u5300\u968f\u673a\u80cc\u666f\u5206\u5b50\u6492\u5728\u6574\u4e2a\u89c6\u91ce\uff0c\u5305\u62ec\u53ef\u80fd\u843d\u5165\u771f\u5b9e\u7ec6\u80de\u9644\u8fd1\u7684\u4f4d\u7f6e\uff0c\u6240\u6709\u8bb0\u5f55\u968f\u673a\u6253\u4e71\u3002\u8fd9\u6837\u4e00\u5171\u6709\u4e94\u767e\u4e00\u5341\u516b\u884c\uff0c\u7a7a\u95f4\u91cd\u53e0\u662f\u6309\u8bbe\u8ba1\u5141\u8bb8\u7684\u3002\u6a21\u62df\u771f\u503c\u53ea\u7528\u4e8e\u4e8b\u540e\u6838\u8d26\uff0c\u5b9e\u9645\u8fd0\u884c\u4f7f\u7528\u4f4d\u7f6e\u548c\u57fa\u56e0\u5217\uff0c\u6ca1\u6709\u5411\u6a21\u578b\u63d0\u4f9b\u771f\u503c\u6807\u7b7e\u6216\u5206\u5272\u5148\u9a8c\u3002<\/p>\n

\u56fa\u5b9a\u6bcf\u4e2a\u6709\u6548\u7ec6\u80de\u81f3\u5c11\u5341\u4e94\u4e2a\u5206\u5b50\u3001\u4e09\u7c7b\u5206\u5b50\u7ec4\u6210\u805a\u7c7b\u3001\u4e00\u4e2a\u7ebf\u7a0b\u548c\u4e00\u767e\u4e8c\u5341\u6b21\u8fed\u4ee3\u3002\u4e24\u6b21\u4ec5\u6539\u53d8\u8fd1\u4f3c\u534a\u5f84\uff0c\u5206\u522b\u7528\u4e09\u548c\u516b\u3002\u4e24\u4e2a\u8f93\u51fa\u90fd\u4fdd\u7559\u4e86\u4e94\u767e\u4e00\u5341\u516b\u6761\u5206\u5b50\u8bb0\u5f55\uff0c\u4e5f\u90fd\u8bc6\u522b\u5230\u4e5d\u4e2a\u6709\u5206\u5b50\u5f52\u5c5e\u7684\u7ec6\u80de\u6807\u8bc6\u3002\u56db\u767e\u516d\u5341\u516b\u4e2a\u5df2\u77e5\u6765\u81ea\u7ec6\u80de\u7684\u5206\u5b50\u5728\u4e24\u6b21\u91cc\u5168\u90e8\u5f97\u5230\u67d0\u4e2a\u7ec6\u80de\u5f52\u5c5e\u3002\u7136\u800c\u534a\u5f84\u4e3a\u4e09\u65f6\uff0c\u4e94\u5341\u4e2a\u5df2\u77e5\u80cc\u666f\u91cc\u6709\u4e09\u5341\u56db\u4e2a\u8fdb\u4e86\u7ec6\u80de\uff0c\u534a\u5f84\u4e3a\u516b\u65f6\u6709\u4e09\u5341\u4e03\u4e2a\u3002\u82e5\u53ea\u62a5\u544a\u7ec6\u80de\u6570\u548c\u771f\u5b9e\u5206\u5b50\u7684\u5206\u914d\u7387\uff0c\u4e24\u5957\u7ed3\u679c\u770b\u8d77\u6765\u4e00\u6a21\u4e00\u6837\uff0c\u80cc\u666f\u5438\u6536\u7684\u53d8\u5316\u5219\u5b8c\u5168\u6ca1\u6709\u663e\u9732\u51fa\u6765\u3002<\/p>\n

\n\n\n\n\n\n\n\n\n
\u4ece\u54ea\u6279\u5206\u5b50\u51fa\u53d1\u6838\u8d26<\/th>\n\u8fd1\u4f3c\u534a\u5f84 3<\/th>\n\u8fd1\u4f3c\u534a\u5f84 8<\/th>\n<\/tr>\n<\/thead>\n
\u81f3\u5c11\u6709\u4e00\u4e2a\u5206\u5b50\u5f52\u5c5e\u7684\u7ec6\u80de\u6807\u8bc6\u6570<\/td>\n9<\/td>\n9<\/td>\n<\/tr>\n
468 \u4e2a\u771f\u5b9e\u7ec6\u80de\u5206\u5b50\u4e2d\u5f97\u5230\u5f52\u5c5e\u7684\u6570\u76ee<\/td>\n468<\/td>\n468<\/td>\n<\/tr>\n
50 \u4e2a\u80cc\u666f\u5206\u5b50\u4e2d\u88ab\u5206\u7ed9\u7ec6\u80de\u7684\u6570\u76ee<\/td>\n34<\/td>\n37<\/td>\n<\/tr>\n
\u504f\u79bb\u5404\u771f\u503c\u56e2\u4e3b\u8981\u9884\u6d4b\u5f52\u5c5e\u7684\u7ec6\u80de\u5206\u5b50\u6570<\/td>\n2<\/td>\n8<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n<\/div>\n
\"\u540c\u4e3a\u4e5d\u4e2a\u7ec6\u80de\uff0c\u8c01\u6536\u8d70\u4e86\u80cc\u666f\u3002518
518 \u4e2a\u6a21\u62df\u5206\u5b50\uff5c\u4e5d\u4e2a\u5df2\u77e5\u4e2d\u5fc3\uff0c\u6bcf\u4e2a\u4e2d\u5fc3\u4ea7\u751f 52 \u4e2a\u5206\u5b50\u3002<\/figcaption><\/figure>\n

\u8fd8\u53ef\u4ee5\u6309\u5b9e\u9645\u6765\u6e90\u518d\u67e5\u4e00\u904d\u3002\u5bf9\u4e8e\u6bcf\u4e2a\u5df2\u77e5\u56e2\uff0c\u5148\u53d6\u672c\u56e2\u4e94\u5341\u4e8c\u679a\u5206\u5b50\u4e2d\u51fa\u73b0\u6b21\u6570\u6700\u591a\u7684\u9884\u6d4b\u6807\u8bc6\uff0c\u518d\u6570\u6709\u591a\u5c11\u5206\u5b50\u53bb\u4e86\u5176\u4ed6\u6807\u8bc6\u3002\u4e24\u6b21\u8fd0\u884c\u4e2d\u5404\u56e2\u7684\u4e3b\u8981\u6807\u8bc6\u90fd\u4e92\u4e0d\u76f8\u540c\uff0c\u53ef\u4ee5\u9010\u56e2\u5bf9\u5e94\u771f\u5b9e\u4e2d\u5fc3\u3002\u5c0f\u534a\u5f84\u5171\u4e24\u679a\u504f\u79bb\u672c\u56e2\u4e3b\u8981\u5f52\u5c5e\uff0c\u5927\u534a\u5f84\u5171\u516b\u679a\u3002\u8f93\u51fa\u6807\u8bc6\u672c\u8eab\u4f1a\u91cd\u65b0\u7f16\u53f7\uff0c\u76f4\u63a5\u9010\u884c\u6bd4\u8f83\u4e24\u6b21\u6587\u4ef6\u91cc\u7684\u7ec6\u80de\u7f16\u53f7\u6587\u5b57\u662f\u5426\u5b8c\u5168\u76f8\u7b49\uff0c\u4f1a\u628a\u5355\u7eaf\u6539\u540d\u4e5f\u7edf\u8ba1\u6210\u5206\u5b50\u8fc1\u79fb\u3002\u5e94\u5148\u7528\u5df2\u77e5\u771f\u503c\u3001\u5171\u540c\u5206\u5b50\u6216\u5145\u5206\u91cd\u53e0\u7684\u7a7a\u95f4\u8303\u56f4\u5339\u914d\u5bf9\u8c61\uff0c\u518d\u6bd4\u8f83\u5f52\u5c5e\u53d8\u5316\u3002<\/p>\n

baysor run -m 15 -s 3 --n-clusters 3 --threads 1 --iters 120 \\\r\n  --skip-ncv-color --count-matrix-format tsv --polygon-format none \\\r\n  -o scale3 molecules.csv\r\n# \u6539\u7528\u53e6\u4e00\u4e2a\u8f93\u51fa\u76ee\u5f55\uff0c\u4fdd\u6301\u5176\u4f59\u8bbe\u7f6e\u76f8\u540c\r\nbaysor run -m 15 -s 8 --n-clusters 3 --threads 1 --iters 120 \\\r\n  --skip-ncv-color --count-matrix-format tsv --polygon-format none \\\r\n  -o scale8 molecules.csv\r\n<\/code><\/pre>\n
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