{"id":71294,"date":"2026-11-15T00:22:41","date_gmt":"2026-11-14T16:22:41","guid":{"rendered":"https:\/\/www.biocloudservice.com\/wordpress\/?p=71294"},"modified":"2026-11-15T01:29:20","modified_gmt":"2026-11-14T17:29:20","slug":"bioinformatics-tools-guide-300","status":"publish","type":"post","link":"https:\/\/www.biocloudservice.com\/wordpress\/bioinformatics-tools-guide-300\/","title":{"rendered":"300 \u4e2a\u751f\u7269\u4fe1\u606f\u5b66\u5de5\u5177\u9009\u7528\u6307\u5357"},"content":{"rendered":"<div class=\"ysx-tool-catalog\" style=\"max-width:850px;margin:0 auto;line-height:1.85;overflow-wrap:anywhere\">\n<p>\u8fd9\u4efd\u6307\u5357\u6309\u7814\u7a76\u4efb\u52a1\u6574\u7406 15 \u4e2a\u65b9\u5411\uff0c\u6bcf\u4e2a\u65b9\u5411 20 \u9879\u3002\u8868\u4e2d\u5217\u51fa\u6bcf\u4e2a\u5de5\u5177\u9002\u7528\u7684\u6570\u636e\u3001\u4f18\u52bf\u3001\u5c40\u9650\u3001\u4ec0\u4e48\u60c5\u51b5\u4e0b\u8ba1\u7b97\u91cf\u4f1a\u4e0a\u5347\uff0c\u4ee5\u53ca\u4f5c\u8005\u63d0\u4f9b\u7684\u8d44\u6599\u3002\u8bfb\u8005\u53ef\u4ee5\u5148\u6309\u8f93\u5165\u6587\u4ef6\u548c\u5e0c\u671b\u5f97\u5230\u7684\u7ed3\u679c\u7f29\u5c0f\u8303\u56f4\uff0c\u518d\u6bd4\u8f83\u540c\u4e00\u73af\u8282\u7684\u5de5\u5177\u3002<\/p>\n<p>\u505a\u5c0f\u89c4\u6a21\u8bd5\u9a8c\u65f6\uff0c\u56fa\u5b9a\u8f6f\u4ef6\u7248\u672c\u3001\u53c2\u8003\u6570\u636e\u548c\u53c2\u6570\uff0c\u53ea\u6539\u53d8\u5f85\u6bd4\u8f83\u7684\u4e00\u9879\u3002\u6bcf\u4e2a\u8bd5\u9a8c\u5c3d\u91cf\u4fdd\u7559\u53ef\u624b\u5de5\u6838\u5bf9\u7684\u9633\u6027\u3001\u9634\u6027\u6216\u5df2\u77e5\u6570\u91cf\uff0c\u5e76\u4fdd\u5b58\u62a5\u544a\u8be5\u6307\u6807\u65f6\u4f7f\u7528\u7684\u5206\u5b50\u4e0e\u5206\u6bcd\u3002\u8d44\u6e90\u5217\u63cf\u8ff0\u5178\u578b\u7684\u5de5\u4f5c\u91cf\u53d8\u5316\uff0c\u5b9e\u9645\u8017\u65f6\u548c\u5185\u5b58\u53d6\u51b3\u4e8e\u6570\u636e\u4e0e\u8fd0\u884c\u73af\u5883\u3002<\/p>\n<p>\u9009\u5de5\u5177\u524d\uff0c\u5199\u4e0b\u624b\u91cc\u5df2\u6709\u7684\u6587\u4ef6\u548c\u9700\u8981\u4ea4\u4ed8\u7684\u6700\u5c0f\u7ed3\u679c\u3002\u4f8b\u5982\uff0c\u540c\u4e00\u4efd\u53cc\u7aef\u6d4b\u5e8f\u6570\u636e\u65e2\u80fd\u7528\u6765\u6570\u4e00\u4e2a\u6837\u672c\u4e2d\u6709\u54ea\u4e9b\u5fae\u751f\u7269\uff0c\u4e5f\u80fd\u5c1d\u8bd5\u62fc\u51fa\u5b83\u4eec\u7684\u57fa\u56e0\u7ec4\u3002\u524d\u8005\u8981\u67e5\u6570\u636e\u5e93\u91cc\u6709\u54ea\u4e9b\u8fd1\u7f18\u7269\u79cd\uff0c\u540e\u8005\u8981\u68c0\u67e5\u957f\u7247\u6bb5\u662f\u5426\u4ece\u540c\u4e00\u83cc\u682a\u8fde\u7eed\u8986\u76d6\u3002\u4e24\u4e2a\u5de5\u5177\u90fd\u80fd\u63a5\u6536\u540c\u4e00\u79cd\u8f93\u5165\uff0c\u4ea4\u4ed8\u7684\u7814\u7a76\u8bc1\u636e\u5374\u4e0d\u540c\u3002<\/p>\n<p>\u6bd4\u8f83\u65b9\u6848\u65f6\uff0c\u7ed9\u6bcf\u7ec4\u90fd\u7559\u4e00\u4efd\u5b8c\u5168\u76f8\u540c\u7684\u8f93\u5165\uff0c\u5e76\u4e8b\u5148\u7ea6\u5b9a\u8981\u6bd4\u7684\u5206\u6bcd\u3002\u6bd4\u5982\u53d8\u5f02\u8c03\u7528\u7684\u4e24\u5f20\u8868\u4e00\u591a\u4e00\u5c11\uff0c\u5148\u533a\u5206\u65b0\u4f4d\u70b9\u3001\u540c\u4e00\u4f4d\u70b9\u7684\u7b49\u4f4d\u8868\u793a\u53d8\u5316\u548c\u539f\u6709\u6837\u672c\u7684\u57fa\u56e0\u578b\u53d8\u5316\u3002\u76f4\u63a5\u6bd4\u8f83\u6700\u7ec8\u6587\u4ef6\u7684\u884c\u6570\uff0c\u4f1a\u628a\u8fd9\u4e09\u7c7b\u53d8\u5316\u6df7\u5728\u4e00\u8d77\u3002<\/p>\n<p>\u8ba1\u7b97\u91cf\u5217\u7ed9\u7684\u662f\u5de5\u4f5c\u91cf\u968f\u4ec0\u4e48\u6761\u4ef6\u589e\u5927\u3002\u770b\u5355\u7ec6\u80de\u5de5\u5177\u5e94\u540c\u65f6\u8bb0\u7ec6\u80de\u6570\u3001\u7279\u5f81\u6570\u548c\u7b97\u6cd5\u662f\u5426\u4fdd\u6301\u7a00\u758f\u77e9\u9635\u3002\u770b\u7ec4\u88c5\u5de5\u5177\u5219\u8981\u770b\u6d4b\u5e8f\u6df1\u5ea6\u3001\u91cd\u590d\u957f\u5ea6\u548c\u500d\u6027\u3002\u4e00\u4e2a\u7269\u79cd\u7684\u4e00\u4efd\u53c2\u8003\u7d22\u5f15\u53ef\u4ee5\u590d\u7528\uff0c\u53e6\u4e00\u4e2a\u9879\u76ee\u82e5\u6362\u4e86\u53c2\u8003\u6216\u6ce8\u91ca\u7248\u672c\uff0c\u65e7\u7d22\u5f15\u5f80\u5f80\u65e0\u6cd5\u76f4\u63a5\u6cbf\u7528\u3002<\/p>\n<p>\u6bcf\u4e2a\u5de5\u5177\u6761\u76ee\u90fd\u7ed9\u51fa\u4f5c\u8005\u6216\u7ef4\u62a4\u673a\u6784\u7684\u8d44\u6599\uff0c\u5df2\u53d1\u8868\u6559\u7a0b\u7684\u5de5\u5177\u540d\u53ef\u76f4\u63a5\u70b9\u5f00\u67e5\u770b\u5b9e\u8dd1\u8bbe\u7f6e\u6216\u539f\u59cb\u8d44\u6599\u7684\u89e3\u8bfb\u3002\u9700\u8981\u6362\u4e00\u4e2a\u5206\u6790\u65b9\u5411\u65f6\uff0c\u70b9\u5f00\u76f8\u5e94\u7684\u76ee\u5f55\u5206\u7ec4\u5373\u53ef\u3002<\/p>\n<p><a class=\"guide-practice-download\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d 12 \u4e2a\u7ec4\u88c5\u3001\u5206\u76f8\u4e0e\u6cdb\u57fa\u56e0\u7ec4\u5b9e\u8dd1\u793a\u4f8b\uff08ZIP\uff09<\/a>\u3002\u5bf9\u5e94\u7b2c 074 \u81f3 085 \u9879\uff0c\u6bcf\u4e2a\u76ee\u5f55\u90fd\u6709\u8fd0\u884c\u811a\u672c\u548c\u6838\u5bf9\u7ed3\u679c\uff0c\u8bf4\u660e\u4e2d\u7ed9\u51fa\u4e86\u8f6f\u4ef6\u7248\u672c\u3001\u4eba\u5de5\u8f93\u5165\u7684\u751f\u6210\u65b9\u5f0f\u548c\u516c\u5f00\u6570\u636e\u7684\u4e0b\u8f7d\u5730\u5740\u3002<\/p>\n<nav aria-label=\"\u7814\u7a76\u65b9\u5411\">\n<ul>\n<li><a href=\"#field-01\">\u5355\u7ec6\u80de\u4e0e\u5355\u7ec6\u80de\u591a\u7ec4\u5b66<\/a>\uff08001\u2013020\uff09<\/li>\n<li><a href=\"#field-02\">\u7a7a\u95f4\u7ec4\u5b66\u4e0e\u7ec4\u7ec7\u56fe\u50cf<\/a>\uff08021\u2013040\uff09<\/li>\n<li><a href=\"#field-03\">\u6d4b\u5e8f\u8d28\u63a7\u3001DNA \u6bd4\u5bf9\u4e0e\u53d8\u5f02\u5206\u6790<\/a>\uff08041\u2013060\uff09<\/li>\n<li><a href=\"#field-04\">\u957f\u8bfb\u957f\u3001\u57fa\u56e0\u7ec4\u7ec4\u88c5\u4e0e\u8d28\u91cf\u8bc4\u4f30<\/a>\uff08061\u2013080\uff09<\/li>\n<li><a href=\"#field-05\">\u6cdb\u57fa\u56e0\u7ec4\u3001\u6bd4\u8f83\u57fa\u56e0\u7ec4\u4e0e\u57fa\u56e0\u6ce8\u91ca<\/a>\uff08081\u2013100\uff09<\/li>\n<li><a href=\"#field-06\">\u5b8f\u57fa\u56e0\u7ec4\u3001\u5206\u7bb1\u4e0e\u83cc\u682a\u5206\u6790<\/a>\uff08101\u2013120\uff09<\/li>\n<li><a href=\"#field-07\">\u5fae\u751f\u7269\u751f\u6001\u3001\u75c5\u539f\u4f53\u4e0e\u529f\u80fd\u57fa\u56e0<\/a>\uff08121\u2013140\uff09<\/li>\n<li><a href=\"#field-08\">\u8f6c\u5f55\u7ec4\u5b9a\u91cf\u3001\u526a\u63a5\u4e0e\u8868\u8fbe\u7f51\u7edc<\/a>\uff08141\u2013160\uff09<\/li>\n<li><a href=\"#field-09\">\u8868\u89c2\u57fa\u56e0\u7ec4\u3001\u7532\u57fa\u5316\u4e0e\u4e09\u7ef4\u57fa\u56e0\u7ec4<\/a>\uff08161\u2013180\uff09<\/li>\n<li><a href=\"#field-10\">\u4eba\u7fa4\u9057\u4f20\u3001GWAS \u4e0e\u57fa\u56e0\u578b\u586b\u8865<\/a>\uff08181\u2013200\uff09<\/li>\n<li><a href=\"#field-11\">\u7cfb\u7edf\u53d1\u80b2\u3001\u5206\u5b50\u8fdb\u5316\u4e0e\u7fa4\u4f53\u6a21\u62df<\/a>\uff08201\u2013220\uff09<\/li>\n<li><a href=\"#field-12\">\u5e8f\u5217\u68c0\u7d22\u3001\u86cb\u767d\u7ed3\u6784\u9884\u6d4b\u4e0e\u8bbe\u8ba1<\/a>\uff08221\u2013240\uff09<\/li>\n<li><a href=\"#field-13\">\u5206\u5b50\u52a8\u529b\u5b66\u3001\u5206\u5b50\u5bf9\u63a5\u4e0e\u51b7\u51bb\u7535\u955c<\/a>\uff08241\u2013260\uff09<\/li>\n<li><a href=\"#field-14\">\u86cb\u767d\u8d28\u7ec4\u5b66\u3001\u4ee3\u8c22\u7ec4\u5b66\u4e0e\u8d28\u8c31<\/a>\uff08261\u2013280\uff09<\/li>\n<li><a href=\"#field-15\">\u80bf\u7624\u57fa\u56e0\u7ec4\u3001\u514d\u75ab\u7ec4\u5e93\u4e0e\u9ad8\u901a\u91cf\u7b5b\u9009<\/a>\uff08281\u2013300\uff09<\/li>\n<\/ul>\n<\/nav>\n<details id=\"field-01\" open style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u5355\u7ec6\u80de\u4e0e\u5355\u7ec6\u80de\u591a\u7ec4\u5b66\uff08001\u2013020\uff09<\/summary>\n<p>\u5148\u770b\u624b\u4e2d\u662f\u54ea\u4e00\u7ea7\u6570\u636e\u3002FASTQ \u53ef\u4ece\u8ba1\u6570\u5f00\u59cb\uff0c\u539f\u59cb\u6db2\u6ef4\u77e9\u9635\u80fd\u68c0\u67e5\u73af\u5883 RNA\uff0c\u5df2\u7ecf\u8fc7\u6ee4\u7684\u8868\u8fbe\u77e9\u9635\u9002\u5408\u505a\u6574\u5408\u4e0e\u6ce8\u91ca\u3002\u6bd4\u8f83\u7ec4\u95f4\u5dee\u5f02\u65f6\uff0c\u4fdd\u7559\u4f9b\u4f53\u4e0e\u6837\u672c\u8eab\u4efd\uff0c\u907f\u514d\u628a\u540c\u4e00\u4f9b\u4f53\u7684\u8bb8\u591a\u7ec6\u80de\u8bef\u4f5c\u72ec\u7acb\u91cd\u590d\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"001\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">001\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cell-ranger-raw-filtered-matrix-barcode-audit\/\">Cell Ranger<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a 10x \u5355\u7ec6\u80de FASTQ \u8f6c\u6210\u57fa\u56e0\u6216\u7279\u5f81\u8ba1\u6570\u77e9\u9635\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4ece\u6761\u5f62\u7801\u8bc6\u522b\u5230\u8d28\u63a7\u62a5\u544a\u91c7\u7528\u7edf\u4e00\u6d41\u7a0b\uff0c\u5e73\u53f0\u53ef\u6309\u6587\u5e93\u590d\u8dd1<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u652f\u6301\u7684\u5efa\u5e93\u7c7b\u578b\u548c\u53c2\u8003\u5305\u6709\u660e\u786e\u8303\u56f4\uff0c\u5df2\u7ecf\u8fc7\u6ee4\u7684\u77e9\u9635\u65e0\u6cd5\u56de\u6eaf\u6240\u6709\u6b65\u9aa4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u6309\u6587\u5e93\u6570\u3001\u8bfb\u6df1\u548c\u5e76\u53d1\u4f30\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.10xgenomics.com\/support\/software\/cell-ranger\/downloads\/cr-system-requirements\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"002\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">002\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/starsolo-reads-barcodes-raw-matrix-cell-filtering\/\">STAR\uff08\u542b STARsolo\uff09<\/a><\/h3>\n<p style=\"margin:3px 0\">\u526a\u63a5\u6bd4\u5bf9\uff0cSTARsolo \u8fd8\u80fd\u751f\u6210\u5355\u7ec6\u80de UMI \u77e9\u9635\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fdd\u7559\u57fa\u56e0\u7ec4\u5750\u6807\uff0c\u65e2\u80fd\u5206\u6790\u5e38\u89c4 RNA-seq\uff0c\u4e5f\u53ef\u5904\u7406\u591a\u79cd\u5355\u7ec6\u80de\u6761\u5f62\u7801\u5e03\u5c40<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4eba\u7c7b\u57fa\u56e0\u7ec4\u7d22\u5f15\u5360\u5185\u5b58\uff0c\u81ea\u5b9a\u4e49\u6761\u5f62\u7801\u548c\u94fe\u7279\u5f02\u6027\u987b\u914d\u51c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5199\u76d8\u3002\u591a\u6587\u5e93\u540c\u65f6\u6bd4\u5bf9\u548c\u8f93\u51fa\u6392\u5e8f BAM \u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/alexdobin\/STAR\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"003\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">003\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/alevin-fry-usa-counts-spliced-unspliced-ambiguous\/\">alevin-fry<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u6761\u5f62\u7801\u548c UMI \u5bf9\u5355\u7ec6\u80de\u8f6c\u5f55\u672c\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f7b\u91cf\u5316\u6620\u5c04\u6d41\u7a0b\u4fbf\u4e8e\u6279\u91cf\u8ba1\u6570\uff0c\u53ef\u533a\u5206\u526a\u63a5\u72b6\u6001<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u7d22\u5f15\u6784\u5efa\u548c\u6a21\u7cca\u5339\u914d\u7b56\u7565\u4f1a\u6539\u53d8\u8ba1\u6570\u53e3\u5f84<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u8bfb\u5199\u3002\u4e0a\u767e\u6587\u5e93\u5e76\u884c\u65f6\u66f4\u6709\u4ef7\u503c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/COMBINE-lab\/alevin-fry\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"004\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">004\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/seurat-dotplot-dot-size-colour-detection-average\/\">Seurat<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5355\u7ec6\u80de\u805a\u7c7b\u3001\u6574\u5408\u3001\u6807\u8bb0\u57fa\u56e0\u4e0e\u591a\u6a21\u6001\u63a2\u7d22\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000R \u751f\u6001\u6210\u719f\uff0c\u5355\u4e2a\u5bf9\u8c61\u53ef\u4e32\u8d77\u8d28\u63a7\u3001\u6574\u5408\u548c\u53ef\u89c6\u5316<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7a20\u5bc6\u7f29\u653e\u77e9\u9635\u6216\u5408\u5e76\u5bf9\u8c61\u5bb9\u6613\u63a8\u9ad8\u5185\u5b58\uff0c\u6574\u5408\u987b\u68c0\u67e5\u751f\u7269\u5dee\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u4e3a\u4e3b\u3002\u591a\u4f9b\u4f53\u3001\u767e\u4e07\u7ec6\u80de\u6216\u591a\u4eba\u540c\u65f6\u64cd\u4f5c\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/satijalab.org\/seurat\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"005\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">005\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/scanpy-anndata-x-raw-counts-normalization-audit\/\">Scanpy<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5728 Python \u4e2d\u5904\u7406\u5355\u7ec6\u80de\u77e9\u9635\u3001\u90bb\u5c45\u56fe\u548c\u805a\u7c7b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000AnnData \u7a00\u758f\u77e9\u9635\u4fbf\u4e8e\u8854\u63a5 Python \u4e0b\u6e38\u5de5\u5177<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f6c\u7a20\u5bc6\u3001\u591a\u5c42\u77e9\u9635\u6216\u91cd\u590d\u8ba1\u7b97\u90bb\u5c45\u56fe\u4f1a\u653e\u5927\u8d44\u6e90\u5360\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3001\u78c1\u76d8\u3002\u6309\u7ec6\u80de\u6570\u3001\u7279\u5f81\u6570\u548c\u56fe\u89c4\u6a21\u8bc4\u4f30<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/scanpy.readthedocs.io\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"006\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">006\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/scvi-counts-batch-integration-neighbor-controls\/\">scvi-tools<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528 scVI\u3001totalVI \u7b49\u6a21\u578b\u6574\u5408\u5355\u7ec6\u80de\u6216\u591a\u7ec4\u5b66\u6570\u636e\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5c0f\u6279\u8bad\u7ec3\u9002\u5408\u5927\u56fe\u8c31\uff0c\u53ef\u6309\u6a21\u578b\u5904\u7406\u6279\u6b21\u548c\u4e0d\u540c\u6a21\u6001<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u5165\u5c42\u548c\u6279\u6b21\u53d8\u91cf\u987b\u6b63\u786e\u8bbe\u7f6e\uff0c\u8fc7\u5ea6\u6821\u6b63\u8981\u7528\u5df2\u77e5\u6807\u8bb0\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u8bad\u7ec3\u3001\u4e3b\u5185\u5b58\u3002\u56fe\u8c31\u89c4\u6a21\u3001\u591a\u6b21\u8bad\u7ec3\u548c\u8c03\u53c2\u51b3\u5b9a\u65f6\u957f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/docs.scvi-tools.org\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"007\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">007\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cellbender-ambient-rna-audit-empty-droplets\/\">CellBender<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6db2\u6ef4\u539f\u59cb\u8ba1\u6570\u77e9\u9635\u4f30\u8ba1\u5e76\u53bb\u9664\u73af\u5883 RNA\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5229\u7528\u7a7a\u6db2\u6ef4\u5b66\u4e60\u80cc\u666f\uff0c\u8f93\u51fa\u53ef\u76f4\u63a5\u63a5\u5e38\u7528\u5355\u7ec6\u80de\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u542b\u7a7a\u6db2\u6ef4\u7684\u539f\u59cb\u77e9\u9635\uff0c\u80cc\u666f\u548c\u7ec6\u80de\u96be\u4ee5\u533a\u5206\u65f6\u987b\u68c0\u67e5\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u4f18\u5148\u3001\u663e\u5b58\u3002\u591a\u6587\u5e93\u5206\u522b\u8bad\u7ec3\u53ef\u5f62\u6210\u6392\u961f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cellbender.readthedocs.io\/en\/latest\/usage\/index.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"008\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">008\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/harmony-batch-overcorrection-pca-cell-states\/\">Harmony<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5355\u7ec6\u80de\u4f4e\u7ef4\u8868\u793a\u505a\u6279\u6b21\u6574\u5408\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u76f4\u63a5\u6821\u6b63\u4e3b\u6210\u5206\uff0c\u4fbf\u4e8e\u5feb\u901f\u6bd4\u8f83\u591a\u4f9b\u4f53\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u51fa\u662f\u6821\u6b63\u5d4c\u5165\uff0c\u5dee\u5f02\u8868\u8fbe\u4ecd\u9700\u5408\u9002\u7684\u8ba1\u6570\u4e0e\u8bbe\u8ba1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u7ec6\u80de\u6570\u3001\u4e3b\u6210\u5206\u548c\u53c2\u6570\u91cd\u8dd1\u6570\u51b3\u5b9a\u5f00\u9500<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/immunogenomics\/harmony\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"009\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">009\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/monocle3-root-partition-infinite-pseudotime\/\">Monocle 3<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5b66\u4e60\u7ec6\u80de\u8f68\u8ff9\u5e76\u4f30\u8ba1\u62df\u65f6\u5e8f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4ee5\u5728\u5206\u533a\u5185\u5b66\u4e60\u5206\u652f\uff0c\u4fbf\u4e8e\u67e5\u770b\u72b6\u6001\u6cbf\u8f68\u8ff9\u7684\u53d8\u5316<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6839\u8282\u70b9\u3001\u91c7\u6837\u8986\u76d6\u548c\u964d\u7ef4\u7ed3\u679c\u90fd\u4f1a\u5f71\u54cd\u8f68\u8ff9\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u8d85\u5927\u90bb\u63a5\u56fe\u548c\u591a\u6b21\u5b50\u7fa4\u91cd\u5efa\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cole-trapnell-lab.github.io\/monocle3\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"010\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">010\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/scvelo-splicing-phase-portrait-velocity-direction\/\">scVelo<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u526a\u63a5\u4e0e\u672a\u526a\u63a5\u8ba1\u6570\u63a8\u65ad RNA \u901f\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u52a8\u529b\u5b66\u6a21\u5f0f\u53ef\u9010\u57fa\u56e0\u62df\u5408\uff0c\u652f\u6301\u6bd4\u8f83\u72b6\u6001\u53d8\u5316\u65b9\u5411<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u53ef\u9760\u7684\u526a\u63a5\u8ba1\u6570\uff0c\u52a8\u529b\u5b66\u5047\u8bbe\u4e0e\u7ec6\u80de\u8986\u76d6\u9650\u5236\u65b9\u5411\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u7ec6\u80de\u9010\u57fa\u56e0\u62df\u5408\u6bd4\u7ed8\u5236\u901f\u5ea6\u56fe\u66f4\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/scvelo.readthedocs.io\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"011\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">011\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cellrank-fate-probabilities-absorption-branches\/\">CellRank<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7ec6\u80de\u8f6c\u79fb\u77e9\u9635\u4f30\u8ba1\u7ec8\u672b\u72b6\u6001\u4e0e\u547d\u8fd0\u6982\u7387\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ec4\u5408\u8868\u8fbe\u76f8\u4f3c\u6027\u3001\u901f\u5ea6\u6216\u5b9e\u9a8c\u65f6\u95f4\u7b49\u4fe1\u606f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90bb\u5c45\u56fe\u548c\u7ec8\u672b\u72b6\u6001\u9009\u62e9\u4f1a\u5f71\u54cd\u6982\u7387\uff0c\u7a00\u6709\u72b6\u6001\u8981\u6838\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u5927\u8f6c\u79fb\u77e9\u9635\u548c\u591a\u4e2a\u6761\u4ef6\u5206\u522b\u6c42\u89e3\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cellrank.readthedocs.io\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"012\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">012\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/pyscenic-regulon-aucell-motif-target-evidence\/\">pySCENIC<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5355\u7ec6\u80de\u8868\u8fbe\u63a8\u65ad\u8f6c\u5f55\u56e0\u5b50\u8c03\u63a7\u5b50\u53ca\u6d3b\u6027\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u5171\u8868\u8fbe\u3001\u57fa\u5e8f\u7b5b\u9009\u548c\u7ec6\u80de\u6d3b\u6027\u8bc4\u5206\u4e32\u8d77\u6765<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u7269\u79cd\u5339\u914d\u7684\u57fa\u5e8f\u6392\u540d\u5e93\uff0c\u5171\u8868\u8fbe\u8fb9\u4ecd\u9700\u72ec\u7acb\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u5168\u57fa\u56e0\u5efa\u7f51\u4e0e\u91cd\u590d\u5efa\u7f51\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pyscenic.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"013\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">013\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cellchat-ligand-receptor-missing-edge-trimean\/\">CellChat<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6bd4\u8f83\u7ec6\u80de\u7fa4\u4e4b\u95f4\u7684\u5019\u9009\u914d\u4f53\u2013\u53d7\u4f53\u4fe1\u53f7\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u6309\u901a\u8def\u6c47\u603b\u7f51\u7edc\uff0c\u4fbf\u4e8e\u8de8\u6761\u4ef6\u5bf9\u7167<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u6570\u636e\u5e93\u548c\u5206\u7fa4\uff0c\u8f6c\u5f55\u672c\u8868\u8fbe\u65e0\u6cd5\u8bc1\u660e\u771f\u5b9e\u4fe1\u53f7\u4f20\u9012<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u7f6e\u6362\u6b21\u6570\u3001\u7ec6\u80de\u7fa4\u6570\u548c\u6570\u636e\u96c6\u6570\u51b3\u5b9a\u5f00\u9500<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/jinworks\/CellChat\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"014\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">014\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/nichenet-ligand-ranking-receiver-background-genes\/\">NicheNet<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u53d1\u9001\u7ec6\u80de\u914d\u4f53\u63a8\u65ad\u63a5\u6536\u7ec6\u80de\u7684\u5019\u9009\u9776\u57fa\u56e0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5c06\u4e0a\u6e38\u914d\u4f53\u548c\u4e0b\u6e38\u5dee\u5f02\u8868\u8fbe\u8054\u7cfb\u8d77\u6765<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5148\u9a8c\u7f51\u7edc\u7684\u8986\u76d6\u53ca\u80cc\u666f\u57fa\u56e0\u96c6\u4f1a\u6539\u53d8\u914d\u4f53\u6392\u540d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u666e\u901a\u5355\u7ec4\u6bd4\u8f83\u8f83\u8f7b\uff0c\u591a\u7ec6\u80de\u5bf9\u4e0e\u591a\u6761\u4ef6\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/saeyslab\/nichenetr\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"015\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">015\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/singler-pruned-labels-median-score-missing-reference\/\">SingleR<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u53c2\u8003\u8868\u8fbe\u8c31\u7ed9\u5355\u7ec6\u80de\u5206\u914d\u7ec6\u80de\u7c7b\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u540c\u65f6\u6bd4\u8f83\u591a\u4e2a\u53c2\u8003\uff0c\u7ed9\u51fa\u6807\u7b7e\u4e0e\u8bc4\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u7f3a\u5931\u7684\u7ec6\u80de\u7c7b\u578b\u6613\u88ab\u5f52\u5165\u8fd1\u4f3c\u7c7b\u522b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6309\u7ec6\u80de\u6ce8\u91ca\u5927\u578b\u53c2\u8003\u56fe\u8c31\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/SingleR.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"016\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">016\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/scdblfinder-captures-homotypic-doublets-rare-cells\/\">scDblFinder<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5355\u7ec6\u80de\u8ba1\u6570\u9884\u6d4b\u53cc\u7ec6\u80de\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u6309\u6355\u83b7\u6279\u6b21\u8fd0\u884c\uff0c\u9002\u5408\u63a5\u5165\u81ea\u52a8\u8d28\u63a7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u540c\u4e00\u7c7b\u578b\u7ec6\u80de\u5f62\u6210\u7684\u53cc\u7ec6\u80de\u8f83\u96be\u8bc6\u522b\uff0c\u9884\u671f\u53cc\u7ec6\u80de\u7387\u5f71\u54cd\u9608\u503c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5e38\u89c4\u5355\u6587\u5e93\u8d1f\u8f7d\u8f83\u4f4e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/scDblFinder.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"017\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">017\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/celltypist-majority-voting-rare-label-audit\/\">CellTypist<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u9884\u8bad\u7ec3\u6216\u81ea\u5efa\u5206\u7c7b\u5668\u6ce8\u91ca\u5355\u7ec6\u80de\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6210\u719f\u6a21\u578b\u63a8\u65ad\u5feb\uff0c\u65b9\u4fbf\u5148\u7b5b\u67e5\u518d\u4eba\u5de5\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9884\u6d4b\u7a7a\u95f4\u53d7\u8bad\u7ec3\u6807\u7b7e\u9650\u5236\uff0c\u8de8\u7ec4\u7ec7\u6216\u7269\u79cd\u9700\u91cd\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5355\u6279\u63a8\u65ad\u8f83\u8f7b\uff0c\u91cd\u8bad\u53ca\u8d85\u5927\u56fe\u8c31\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.celltypist.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"018\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">018\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cell-ranger-arc-paired-barcodes-umi-cutsite-qc\/\">Cell Ranger ARC<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece 10x Multiome \u7684 RNA \u4e0e ATAC \u6587\u5e93\u751f\u6210\u914d\u5bf9\u7ed3\u679c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7edf\u4e00\u7ec6\u80de\u6761\u5f62\u7801\uff0c\u63d0\u4f9b\u540c\u4e00\u7ec6\u80de\u7684\u8868\u8fbe\u548c\u67d3\u8272\u8d28\u4fe1\u606f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9650\u5b9a\u5339\u914d\u7684 Multiome \u6587\u5e93\uff0c\u53c2\u8003\u6ce8\u91ca\u987b\u540c\u65f6\u9002\u914d\u4e24\u79cd\u6a21\u6001<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u4e24\u7c7b FASTQ \u548c\u591a\u6587\u5e93\u5e76\u53d1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.10xgenomics.com\/support\/software\/cell-ranger-arc\/latest\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"019\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">019\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/archr-pseudobulk-reproducible-peaks-donor-support\/\">ArchR<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5355\u7ec6\u80de ATAC \u7247\u6bb5\u6784\u5efa\u5cf0\u96c6\u3001\u964d\u7ef4\u5e76\u505a\u8c03\u63a7\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000Arrow \u6587\u4ef6\u652f\u6301\u5206\u6279\u5904\u7406\uff0c\u80fd\u4e32\u8054\u5cf0\u8c03\u7528\u548c motif \u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6587\u4ef6\u8bfb\u5199\u548c\u5206\u7ec4\u4f2a\u91cd\u590d\u7b56\u7565\u4f1a\u5f71\u54cd\u901f\u5ea6\u53ca\u5cf0\u96c6\u5408<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3001\u78c1\u76d8\u541e\u5410\u3002\u5927\u91cf\u7247\u6bb5\u548c\u591a\u7ec4\u5cf0\u8c03\u7528\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.archrproject.com\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"020\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">020\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/signac-merge-atac-common-peaks-fragment-recount\/\">Signac<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5728 Seurat \u4e2d\u5206\u6790\u5355\u7ec6\u80de ATAC \u4e0e\u914d\u5bf9 RNA\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8054\u7528\u8868\u8fbe\u3001\u5cf0\u3001motif \u548c\u7247\u6bb5\u8f68\u8ff9<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u6392\u5e8f\u4e14\u5efa\u597d\u7d22\u5f15\u7684\u7247\u6bb5\u6587\u4ef6\uff0c\u5927\u91cf\u533a\u57df\u67e5\u8be2\u53d7\u78c1\u76d8\u9650\u5236<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u968f\u673a\u8bfb\u76d8\u3002\u591a\u6837\u672c\u7247\u6bb5\u5408\u5e76\u4e0e\u5cf0\u96c6\u91cd\u5b9a\u91cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/stuartlab.org\/signac\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-02\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u7a7a\u95f4\u7ec4\u5b66\u4e0e\u7ec4\u7ec7\u56fe\u50cf\uff08021\u2013040\uff09<\/summary>\n<p>\u5148\u5206\u6e05\u8f93\u51fa\u5355\u4f4d\u3002\u4e00\u4e2a\u70b9\u4f4d\u53ef\u80fd\u6df7\u6709\u591a\u79cd\u7ec6\u80de\uff0c\u4e00\u4e2a\u8367\u5149\u5bf9\u8c61\u4e5f\u53ef\u80fd\u53ea\u662f\u540c\u4e00\u7ec6\u80de\u5185\u7684\u4e00\u4e2a\u4fe1\u53f7\u3002\u89e3\u5377\u79ef\u524d\u6838\u5bf9\u53c2\u8003\u8c31\u548c\u70b9\u4f4d\u5750\u6807\uff0c\u56fe\u50cf\u8ba1\u6570\u524d\u68c0\u67e5\u50cf\u7d20\u6807\u5c3a\u3001\u5206\u5272\u8fb9\u754c\u548c\u7236\u5b50\u5bf9\u8c61\u5173\u7cfb\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"021\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">021\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/space-ranger-spatial-coordinates-scale-crop-landmarks\/\">Space Ranger<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5c06 Visium \u7cfb\u5217\u6d4b\u5e8f\u4e0e\u7ec4\u7ec7\u56fe\u50cf\u914d\u51c6\u5e76\u751f\u6210\u7a7a\u95f4\u8868\u8fbe\u77e9\u9635\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e32\u8054\u56fe\u50cf\u3001\u7a7a\u95f4\u5750\u6807\u548c\u5206\u8fa8\u7387\u76f8\u5173\u8f93\u51fa\uff0c\u4fbf\u4e8e\u5207\u7247\u95f4\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u82af\u7247\u578b\u53f7\u3001\u56fe\u50cf\u8d28\u91cf\u4e0e\u914d\u51c6\u65b9\u5f0f\u51b3\u5b9a\u53ef\u7528\u6d41\u7a0b\u548c\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002Visium HD\u3001\u591a\u5207\u7247\u53ca\u9ad8\u5206\u8fa8\u7387\u56fe\u50cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.10xgenomics.com\/support\/software\/space-ranger\/downloads\/space-ranger-system-requirements\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"022\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">022\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/xenium-ranger-segmentation-transcript-assignment-audit\/\">Xenium Ranger<\/a><\/h3>\n<p style=\"margin:3px 0\">\u91cd\u5206\u6790 Xenium \u8f93\u51fa\uff0c\u91cd\u505a\u6216\u5bfc\u5165\u5206\u5272\u53ca\u8f6c\u5f55\u672c\u5206\u914d\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u540c\u4e00\u6279\u539f\u59cb\u7ed3\u679c\u4e0a\u6bd4\u8f83\u4e0d\u540c\u7ec6\u80de\u8fb9\u754c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u91cd\u5206\u5272\u3001\u5bfc\u5165\u6807\u7b7e\u4e0e\u5bfc\u5165\u591a\u8fb9\u5f62\u7684\u5185\u5b58\u9700\u6c42\u5dee\u522b\u5f88\u5927<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u78c1\u76d8\u3002\u6309\u7ec4\u7ec7\u9762\u79ef\u3001\u8f6c\u5f55\u672c\u6570\u548c\u5177\u4f53\u5b50\u547d\u4ee4\u4f30\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.10xgenomics.com\/support\/software\/xenium-ranger\/latest\/release-notes\/XR-system-requirements\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"023\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">023\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/squidpy-neighborhood-enrichment-radius-null-edges\/\">Squidpy<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6784\u5efa\u7a7a\u95f4\u90bb\u5c45\u56fe\u5e76\u5206\u6790\u5171\u73b0\u3001\u90bb\u57df\u548c\u7ec4\u7ec7\u56fe\u50cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7a7a\u95f4\u5750\u6807\u3001\u56fe\u50cf\u548c AnnData \u53ef\u5728\u540c\u4e00\u6d41\u7a0b\u4e2d\u4f7f\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u534a\u5f84\u3001\u90bb\u5c45\u5b9a\u4e49\u548c\u7ec4\u7ec7\u8fb9\u754c\u4f1a\u6539\u53d8\u5bcc\u96c6\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u9ad8\u5bc6\u5ea6\u7ec6\u80de\u56fe\u3001\u7f6e\u6362\u53ca\u591a\u5207\u7247\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/squidpy.readthedocs.io\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"024\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">024\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/giotto-suite-z-plane-transcript-polygon-overlap\/\">Giotto Suite<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7ec4\u7ec7\u7a7a\u95f4\u8868\u8fbe\u3001\u7ec6\u80de\u591a\u8fb9\u5f62\u548c\u56fe\u50cf\u5e76\u5206\u6790\u7a7a\u95f4\u5173\u7cfb\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u4e9a\u7ec6\u80de\u4e0e\u7ec4\u7ec7\u5c42\u7ea7\u95f4\u5207\u6362\uff0c\u9002\u914d\u591a\u79cd\u7a7a\u95f4\u6570\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5206\u8fa8\u7387\u5206\u6790\u9700\u8981\u7edf\u4e00\u5750\u6807\u3001\u50cf\u7d20\u5c3a\u5ea6\u548c\u7279\u5f81\u6807\u8bc6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u78c1\u76d8\u3002\u5206\u5b50\u5750\u6807\u3001\u5207\u7247\u56fe\u5c42\u53ca\u4e2d\u95f4\u5bf9\u8c61\u53e0\u52a0<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/giottosuite.com\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"025\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">025\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/rctd-spot-weights-doublet-full-reference-types\/\">RCTD\uff08spacexr\uff09<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u5355\u7ec6\u80de\u53c2\u8003\u5206\u89e3\u7a7a\u95f4\u70b9\u4f4d\u4e2d\u7684\u7ec6\u80de\u7c7b\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6709\u9488\u5bf9\u6df7\u5408\u70b9\u4f4d\u7684\u6a21\u5f0f\uff0c\u53ef\u6821\u6b63\u4e24\u5e73\u53f0\u7684\u8868\u8fbe\u5dee\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u7f3a\u5c11\u7ec6\u80de\u7c7b\u578b\u6216\u76f8\u8fd1\u7c7b\u578b\u96be\u5206\u65f6\uff0c\u6743\u91cd\u89e3\u91ca\u53d7\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6309\u70b9\u4f4d\u6570\u3001\u53c2\u8003\u7c7b\u578b\u548c\u5207\u7247\u6570\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dmcable\/spacexr\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"026\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">026\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cell2location-spot-abundance-posterior-mean-quantile-check\/\">cell2location<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u7a7a\u95f4\u8868\u8fbe\u4f30\u8ba1\u5404\u7ec6\u80de\u7c7b\u578b\u7684\u4e30\u5ea6\u5206\u5e03\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5c42\u7ea7\u6a21\u578b\u53ef\u5904\u7406\u6280\u672f\u53d8\u5f02\uff0c\u7ed9\u51fa\u540e\u9a8c\u4e0d\u786e\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u8868\u8fbe\u53ca\u6bcf\u4f4d\u7f6e\u7ec6\u80de\u6570\u7b49\u5148\u9a8c\u4f1a\u5f71\u54cd\u4e30\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u8bad\u7ec3\u3001\u663e\u5b58\u3001\u4e3b\u5185\u5b58\u3002\u9ad8\u5bc6\u5ea6\u5207\u7247\u4e0e\u6a21\u578b\u91cd\u590d\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cell2location.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"027\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">027\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/tangram-held-out-gene-mapping-rows-spatial-validation\/\">Tangram<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5c06\u5355\u7ec6\u80de\u8868\u8fbe\u6620\u5c04\u5230\u7a7a\u95f4\u4f4d\u7f6e\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u7ec6\u80de\u7ea7\u6216\u805a\u7c7b\u7ea7\u6620\u5c04\uff0c\u53ef\u6295\u5f71\u989d\u5916\u57fa\u56e0<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5171\u4eab\u57fa\u56e0\u4e0d\u8db3\u4f1a\u524a\u5f31\u5b9a\u4f4d\uff0c\u7ec6\u80de\u7ea7\u6620\u5c04\u77e9\u9635\u53ef\u80fd\u5f88\u5927<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u5185\u5b58\u3002\u7ec6\u80de\u6570\u4e0e\u4f4d\u7f6e\u6570\u540c\u65f6\u589e\u5927\u65f6\u5c24\u751a<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/broadinstitute\/Tangram\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"028\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">028\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/card-spatial-deconvolution-shuffled-coordinates-boundaries\/\">CARD<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7ed3\u5408\u53c2\u8003\u8868\u8fbe\u4e0e\u7a7a\u95f4\u76f8\u5173\u6027\u505a\u7ec6\u80de\u7c7b\u578b\u53cd\u5377\u79ef\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u76f8\u90bb\u4f4d\u7f6e\u53ef\u5171\u4eab\u4fe1\u606f\uff0c\u9002\u5408\u8fde\u7eed\u7ec4\u7ec7\u533a\u57df<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7a7a\u95f4\u5e73\u6ed1\u53ef\u80fd\u6a21\u7cca\u9510\u5229\u8fb9\u754c\uff0c\u53c2\u8003\u7c7b\u578b\u7f3a\u5931\u4f1a\u4ea7\u751f\u504f\u5dee<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u66f4\u5bc6\u7684\u70b9\u4f4d\u4e0e\u591a\u5207\u7247\u62df\u5408\u589e\u52a0\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/YMa-lab\/CARD\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"029\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">029\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/spotlight-nmf-pure-controls-mixture-residuals\/\">SPOTlight<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u6807\u8bb0\u57fa\u56e0\u542f\u52a8 NMF\uff0c\u518d\u4f30\u8ba1\u70b9\u4f4d\u7ec6\u80de\u7ec4\u6210\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u67e5\u770b\u4e3b\u9898\u4e0e\u7ec6\u80de\u7c7b\u578b\u7684\u5bf9\u5e94\uff0c\u7ed3\u679c\u4fbf\u4e8e\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5bf9\u53c2\u8003\u6807\u8bb0\u9009\u62e9\u548c\u76f8\u4f3c\u7c7b\u578b\u7684\u53ef\u5206\u6027\u654f\u611f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u53c2\u8003\u7ec6\u80de\u6570\u3001\u4e3b\u9898\u6570\u53ca\u91cd\u590d\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/SPOTlight.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"030\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">030\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/bayesspace-subspots-parent-grid-cluster-agreement\/\">BayesSpace<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7a7a\u95f4\u8d1d\u53f6\u65af\u6a21\u578b\u805a\u7c7b\u5e76\u7ec6\u5316\u70b9\u4f4d\u5206\u8fa8\u7387\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u663e\u5f0f\u5229\u7528\u8fd1\u90bb\uff0c\u53ef\u63a2\u7d22\u70b9\u4f4d\u5185\u90e8\u7684\u7ed3\u6784<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ec6\u5316\u7ed3\u679c\u6765\u81ea\u6a21\u578b\u63a8\u65ad\uff0cMCMC \u8fed\u4ee3\u9700\u8981\u68c0\u67e5\u7a33\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5207\u7247\u9762\u79ef\u3001\u5206\u8fa8\u7387\u53ca\u8fed\u4ee3\u6570\u51b3\u5b9a\u65f6\u957f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/BayesSpace.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"031\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">031\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/stagate-spatial-radius-gap-neighbors-embedding\/\">STAGATE<\/a><\/h3>\n<p style=\"margin:3px 0\">\u901a\u8fc7\u56fe\u6ce8\u610f\u529b\u81ea\u7f16\u7801\u5668\u8bc6\u522b\u7a7a\u95f4\u8868\u8fbe\u57df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u90bb\u57df\u548c\u8868\u8fbe\u53ef\u5171\u540c\u53c2\u4e0e\u5d4c\u5165\uff0c\u9002\u5408\u7ec4\u7ec7\u533a\u57df\u5212\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u56fe\u534a\u5f84\u4e0e\u90bb\u63a5\u6784\u9020\u5f71\u54cd\u8fb9\u754c\uff0c\u6362\u5e73\u53f0\u8981\u91cd\u65b0\u8bbe\u5b9a<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u663e\u5b58\u3002\u8282\u70b9\u6570\u3001\u8fb9\u6570\u53ca\u5207\u7247\u6570\u91cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/zhanglabtools\/STAGATE\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"032\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">032\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/spagcn-histology-pixel-axes-distance-controls\/\">SpaGCN<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7ed3\u5408\u8868\u8fbe\u3001\u7a7a\u95f4\u5750\u6807\u548c\u7ec4\u7ec7\u56fe\u50cf\u8bc6\u522b\u533a\u57df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5207\u7247\u67d3\u8272\u60c5\u51b5\u53ef\u4e3a\u57df\u5212\u5206\u8865\u5145\u4fe1\u606f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u67d3\u8272\u5dee\u5f02\u3001\u56fe\u6743\u91cd\u548c\u5206\u8fa8\u7387\u4f1a\u5f71\u54cd\u8de8\u5207\u7247\u4e00\u81f4\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU \u6216 GPU\u3002\u5927\u70b9\u4f4d\u56fe\u7684\u8ddd\u79bb\u548c\u90bb\u63a5\u8ba1\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/jianhuupenn\/SpaGCN\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"033\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">033\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/paste-transport-cropped-section-missing-spot\/\">PASTE<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u6700\u4f18\u4f20\u8f93\u5bf9\u9f50\u591a\u5f20\u7a7a\u95f4\u8f6c\u5f55\u7ec4\u5207\u7247\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7efc\u5408\u8868\u8fbe\u4e0e\u51e0\u4f55\u8ddd\u79bb\u5f97\u5230\u8de8\u5207\u7247\u6620\u5c04<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ec4\u7ec7\u7f3a\u5931\u6216\u5207\u7247\u5f62\u53d8\u4f1a\u5f71\u54cd\u5bf9\u9f50\uff0c\u539f\u59cb\u65b9\u6cd5\u9002\u5408\u91cd\u53e0\u533a\u57df<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u8ba1\u7b97\u65f6\u95f4\u3002\u4e24\u5f20\u5207\u7247\u7684\u70b9\u4f4d\u6570\u5171\u540c\u51b3\u5b9a\u4f20\u8f93\u77e9\u9635\u5927\u5c0f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/raphael-group\/paste\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"034\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">034\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/sparkx-spatial-genes-ring-projection-mixture-null\/\">SPARK-X<\/a><\/h3>\n<p style=\"margin:3px 0\">\u68c0\u6d4b\u968f\u7a7a\u95f4\u4f4d\u7f6e\u53d8\u5316\u7684\u57fa\u56e0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u975e\u53c2\u6570\u68c0\u9a8c\u9002\u5408\u8f83\u5927\u7a00\u758f\u8868\u8fbe\u77e9\u9635<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u80fd\u53d1\u73b0\u7a7a\u95f4\u5173\u8054\uff0c\u5177\u4f53\u5c5e\u4e8e\u54ea\u79cd\u7ec4\u7ec7\u7ed3\u6784\u4ecd\u9700\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u57fa\u56e0\u6570\u3001\u70b9\u4f4d\u6570\u548c\u591a\u5207\u7247\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/xzhoulab\/SPARK\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"035\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">035\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/banksy-cell-type-versus-neighborhood-lambda\/\">BANKSY<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a\u5c40\u90e8\u90bb\u57df\u8868\u8fbe\u7eb3\u5165\u7ec6\u80de\u5206\u578b\u4e0e\u7ec4\u7ec7\u5206\u533a\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8c03\u8282\u7ec6\u80de\u81ea\u8eab\u548c\u90bb\u57df\u7684\u6743\u91cd\uff0c\u6bd4\u8f83\u4e24\u7c7b\u7ed3\u6784<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90bb\u57df\u5c3a\u5ea6\u53ca\u6743\u91cd\u4f1a\u6539\u53d8\u7ec6\u80de\u7c7b\u578b\u548c\u7a7a\u95f4\u57df\u7684\u754c\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6784\u5efa\u591a\u5c3a\u5ea6\u90bb\u57df\u7279\u5f81\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/prabhakarlab\/Banksy\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"036\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">036\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/baysor-molecule-assignment-cell-radius-background\/\">Baysor<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6309\u8f6c\u5f55\u672c\u4f4d\u7f6e\u4e0e\u7ec4\u6210\u63a8\u65ad\u539f\u4f4d\u7ec6\u80de\u8fb9\u754c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ed3\u5408\u6216\u72ec\u7acb\u4e8e\u5df2\u6709\u5206\u5272\u5148\u9a8c\uff0c\u518d\u505a\u8f6c\u5f55\u672c\u5206\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7a00\u758f\u9762\u677f\u3001\u7ec6\u80de\u62e5\u6324\u548c\u5c3a\u5ea6\u5148\u9a8c\u4f1a\u5f71\u54cd\u8fb9\u754c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5206\u5b50\u5750\u6807\u6570\u3001\u7ec4\u7ec7\u9762\u79ef\u4e0e\u91cd\u590d\u5206\u5272<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/kharchenkolab\/Baysor\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"037\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">037\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cellpose-cyto3-diameter-instance-recall-synthetic\/\">Cellpose<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u663e\u5fae\u56fe\u50cf\u7684\u7ec6\u80de\u6216\u7ec6\u80de\u6838\u505a\u5b9e\u4f8b\u5206\u5272\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7528\u9884\u8bad\u7ec3\u6a21\u578b\u5e76\u7528\u4eba\u5de5\u6807\u6ce8\u5fae\u8c03<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u67d3\u8272\u3001\u5bc6\u5ea6\u548c\u5f62\u6001\u53d8\u5316\u65f6\u987b\u62bd\u67e5\u5206\u5272\uff0c\u5206\u5757\u8fb9\u754c\u8981\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3001\u56fe\u50cf\u76d8\u3002\u6574\u5f20\u5207\u7247\u3001\u4e09\u7ef4\u5806\u6808\u548c\u6279\u91cf\u63a8\u65ad<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cellpose.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"038\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">038\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/stardist-star-convex-rays-round-versus-u-shape\/\">StarDist<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u661f\u51f8\u591a\u8fb9\u5f62\u6216\u591a\u9762\u4f53\u5206\u5272\u7ec6\u80de\u6838\u7b49\u5bf9\u8c61\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5bf9\u8fd1\u5706\u4e14\u5bc6\u96c6\u7684\u7ec6\u80de\u6838\u53ef\u76f4\u63a5\u8f93\u51fa\u5b9e\u4f8b\u8f6e\u5ed3<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u661f\u51f8\u5f62\u72b6\u5047\u8bbe\u9650\u5236\u5bf9\u5f3a\u5206\u53c9\u6216\u4e0d\u89c4\u5219\u5bf9\u8c61\u7684\u8868\u73b0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u5185\u5b58\u3002\u4e09\u7ef4\u8bad\u7ec3\u548c\u5927\u4f53\u79ef\u5207\u5757\u63a8\u65ad<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/stardist\/stardist\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"039\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">039\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/qupath-nested-annotations-cell-density-pixel-calibration\/\">QuPath<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6d4f\u89c8\u5168\u89c6\u91ce\u75c5\u7406\u5207\u7247\u5e76\u68c0\u6d4b\u3001\u5206\u7c7b\u3001\u8ba1\u6570\u7ec6\u80de\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4ea4\u4e92\u6807\u6ce8\u53ef\u590d\u7528\u5230\u811a\u672c\u5316\u6279\u5904\u7406\uff0c\u4fbf\u4e8e\u75c5\u7406\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u67d3\u8272\u5f52\u4e00\u5316\u548c\u5206\u7c7b\u5668\u8fc1\u79fb\u8981\u91cd\u65b0\u6821\u51c6\uff0c\u5355\u5f20\u9605\u7247\u8d1f\u8f7d\u8f83\u4f4e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u56fe\u50cf\u8bfb\u76d8\u3001CPU\u3002\u6574\u6279\u5168\u5207\u7247\u5206\u6790\u65f6\u5347\u7ea7<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/qupath.github.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"040\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">040\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cellprofiler-ph3-parent-nuclei-border-counts\/\">CellProfiler<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u6a21\u5757\u5316\u6d41\u7a0b\u8fdb\u884c\u663e\u5fae\u56fe\u50cf\u5206\u5272\u548c\u8868\u578b\u6d4b\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6709\u56fe\u5f62\u754c\u9762\u548c\u6279\u5904\u7406\u5165\u53e3\uff0c\u9002\u5408\u591a\u5b54\u677f\u7edf\u4e00\u6d4b\u91cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6210\u50cf\u6761\u4ef6\u6539\u53d8\u65f6\u9608\u503c\u548c\u5206\u5272\u6b65\u9aa4\u8981\u9010\u6279\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u56fe\u50cf\u76d8\u3002\u9ad8\u5185\u6db5\u7b5b\u9009\u7684\u5b54\u677f\u6570\u548c\u901a\u9053\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/CellProfiler\/CellProfiler\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-03\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u6d4b\u5e8f\u8d28\u63a7\u3001DNA \u6bd4\u5bf9\u4e0e\u53d8\u5f02\u5206\u6790\uff08041\u2013060\uff09<\/summary>\n<p>\u6309\u5206\u6790\u6b65\u9aa4\u4fdd\u5b58\u4e2d\u95f4\u8bc1\u636e\u3002\u505a\u8d28\u63a7\u65f6\u4fdd\u7559\u8bfb\u5bf9\u548c\u5355\u7aef\u7684\u5206\u6bcd\u3002\u505a\u6bd4\u5bf9\u65f6\u4fdd\u5b58\u53c2\u8003\u7248\u672c\u548c\u9644\u52a0\u5e8f\u5217\u3002\u505a\u53d8\u5f02\u5206\u6790\u65f6\u533a\u5206\u5019\u9009\u3001\u5df2\u901a\u8fc7\u7684\u4f4d\u70b9\u548c\u6837\u672c\u7ea7\u57fa\u56e0\u578b\u3002\u8bfb\u6bb5\u6570\u3001\u6a21\u677f\u6570\u4e0e\u4f4d\u70b9\u6570\u5206\u522b\u8ba1\u91cf\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"041\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">041\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/fastqc-duplication-prefix-50bp-versus-full-read\/\">FastQC<\/a><\/h3>\n<p style=\"margin:3px 0\">\u68c0\u67e5 FASTQ \u7684\u78b1\u57fa\u8d28\u91cf\u3001\u63a5\u5934\u3001GC \u4e0e\u91cd\u590d\u7b49\u6307\u6807\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6807\u51c6\u62a5\u544a\u4fbf\u4e8e\u5feb\u901f\u53d1\u73b0\u5f02\u5e38\u6837\u672c\uff0c\u5e76\u6307\u5bfc\u662f\u5426\u8981\u56de\u770b\u5b9e\u9a8c\u73af\u8282<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u5757\u8b66\u793a\u9700\u8981\u7ed3\u5408\u5efa\u5e93\u7c7b\u578b\u89e3\u91ca\uff0c\u8d28\u63a7\u62a5\u544a\u672c\u8eab\u4e0d\u4f1a\u4fee\u590d\u6d4b\u5e8f\u504f\u5dee<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u76d8\u3002\u5355\u6587\u5e93\u8f83\u8f7b\uff0c\u9002\u5408\u4f5c\u4e3a\u8be2\u95ee\u4e0b\u6e38\u6bd4\u5bf9\u6216\u91cd\u5206\u6790\u7684\u5165\u53e3<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"042\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">042\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/fastp-paired-ends-orphans-read-count-denominators\/\">fastp<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5728\u5355\u6b21\u626b\u63cf\u4e2d\u8d28\u63a7\u3001\u4fee\u526a\u548c\u8fc7\u6ee4\u77ed\u8bfb\u957f FASTQ\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5408\u5e76\u591a\u79cd\u9884\u5904\u7406\u6b65\u9aa4\uff0c\u8f93\u51fa\u6bcf\u4e2a\u6837\u672c\u7684\u8d28\u63a7\u62a5\u544a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u88c1\u526a\u9608\u503c\u548c\u8fc7\u6ee4\u89c4\u5219\u5f71\u54cd\u8bfb\u6bb5\u4fdd\u7559\u7387\uff0c\u7279\u6b8a\u5efa\u5e93\u9700\u5355\u72ec\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u541e\u5410\u3002\u5927\u91cf\u538b\u7f29 FASTQ \u5e76\u53d1\u8bfb\u5199\u65f6\uff0c\u5b58\u50a8\u5f80\u5f80\u5148\u9971\u548c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/OpenGene\/fastp\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"043\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">043\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/bwa-mem2-mapq-reference-duplicate-contig\/\">BWA-MEM2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5c06\u77ed\u8bfb\u957f DNA \u6bd4\u5bf9\u5230\u53c2\u8003\u57fa\u56e0\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6cbf\u7528 BWA-MEM \u7684\u5206\u6790\u4e60\u60ef\uff0c\u9002\u5408\u591a\u6838\u6279\u91cf\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7d22\u5f15\u5360\u7528\u548c CPU \u6307\u4ee4\u96c6\u5f71\u54cd\u90e8\u7f72\uff0c\u77ed\u8bfb\u957f\u96be\u89e3\u91cd\u590d\u533a<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u5e26\u5bbd\u3001BAM \u5199\u76d8\u3002\u6574\u6279\u4eba\u5168\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bwa-mem2\/bwa-mem2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"044\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">044\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/bowtie2-local-soft-clipping-read-coverage\/\">Bowtie 2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u77ed\u8bfb\u957f\u505a\u5c40\u90e8\u6216\u7aef\u5230\u7aef\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7d22\u5f15\u7075\u6d3b\uff0c\u5e38\u7528\u4e8e\u5fae\u751f\u7269\u3001ATAC \u53ca\u5bbf\u4e3b\u53bb\u9664<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7f3a\u5c11\u9488\u5bf9 RNA \u526a\u63a5\u7684\u5efa\u6a21\uff0c\u591a\u91cd\u6bd4\u5bf9\u9700\u660e\u786e\u5904\u7406\u7b56\u7565<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u76d8\u3002\u4eba\u6e90\u53bb\u9664\u6216\u6279\u91cf\u6df1\u6d4b\u5e8f\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/BenLangmead\/bowtie2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"045\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">045\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/samtools-count-records-qname-overlapping-regions\/\">SAMtools<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9 SAM\u3001BAM\u3001CRAM \u6392\u5e8f\u3001\u5408\u5e76\u3001\u7d22\u5f15\u548c\u63d0\u53d6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u547d\u4ee4\u53ef\u4e32\u6d41\uff0c\u9002\u5408\u628a\u5927\u6587\u4ef6\u5904\u7406\u7eb3\u5165\u6d41\u6c34\u7ebf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6392\u5e8f\u4f9d\u8d56\u4e34\u65f6\u7a7a\u95f4\uff0c\u7ebf\u7a0b\u548c\u5355\u7ebf\u7a0b\u5185\u5b58\u8bbe\u7f6e\u5f71\u54cd\u5cf0\u503c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u4e34\u65f6\u76d8\u541e\u5410\u3001CPU\u3002\u9ad8\u6df1\u5ea6 BAM \u6392\u5e8f\u548c\u961f\u5217\u5408\u5e76<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.htslib.org\/doc\/samtools.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"046\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">046\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/picard-markduplicates-read-groups-library-id\/\">Picard<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6807\u8bb0\u91cd\u590d\u3001\u6574\u7406\u6bd4\u5bf9\u6587\u4ef6\u5e76\u6c47\u603b\u6d4b\u5e8f\u6307\u6807\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8bfb\u7ec4\u548c\u8d28\u63a7\u8f93\u51fa\u6807\u51c6\u5316\uff0c\u4fbf\u4e8e\u548c GATK \u6d41\u7a0b\u8854\u63a5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000Java \u5806\u3001\u4e34\u65f6\u6587\u4ef6\u4ee5\u53ca\u9ad8\u91cd\u590d\u6587\u5e93\u4f1a\u5f71\u54cd\u8fd0\u884c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u4e34\u65f6\u76d8\u3001\u5185\u5b58\u3001CPU\u3002\u5927 BAM \u53bb\u91cd\u590d\u53ca\u5e76\u53d1\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/broadinstitute.github.io\/picard\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"047\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">047\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/bcftools-multiallelic-split-ad-genotype-denominator\/\">BCFtools<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9 VCF\/BCF \u505a\u53d8\u5f02\u68c0\u6d4b\u3001\u89c4\u8303\u5316\u3001\u8fc7\u6ee4\u548c\u5408\u5e76\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000BCF \u4e8c\u8fdb\u5236\u4e0e\u6d41\u5f0f\u7ba1\u9053\u9002\u5408\u5904\u7406\u5927\u89c4\u6a21\u4f4d\u70b9\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u591a\u7b49\u4f4d\u8868\u793a\u3001\u6837\u672c\u5b57\u6bb5\u548c\u8fc7\u6ee4\u8868\u8fbe\u5f0f\u5fc5\u987b\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u3002\u5927\u961f\u5217\u91cd\u7f16\u7801\u3001\u5408\u5e76\u548c\u5168\u5e93\u626b\u63cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/samtools.github.io\/bcftools\/bcftools.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"048\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">048\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/gatk-gvcf-reference-blocks-zero-depth-genotype\/\">GATK<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528 HaplotypeCaller\u3001Mutect2 \u7b49\u505a\u80da\u7cfb\u6216\u4f53\u7ec6\u80de\u53d8\u5f02\u68c0\u6d4b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u6309\u533a\u95f4\u62c6\u5206\u4efb\u52a1\uff0c\u80da\u7cfb gVCF \u53ef\u8fdb\u5165\u961f\u5217\u8054\u5408\u5206\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0d\u540c\u6a21\u5757\u7684\u5e76\u884c\u65b9\u5f0f\u548c\u5185\u5b58\u6a21\u578b\u4e0d\u540c\uff0c\u8054\u5408\u5bfc\u5165\u8fd8\u53d7\u6587\u4ef6\u7cfb\u7edf\u9650\u5236<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u4eba WGS \u961f\u5217\u6216\u80bf\u7624\u914d\u5bf9\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/broadinstitute\/gatk\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"049\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">049\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/deepvariant-small-model-cnn-wgs-variant-quality-na12878\/\">DeepVariant<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u77ed\u8bfb\u957f\u6216\u957f\u8bfb\u957f\u6bd4\u5bf9\u4e2d\u8bc6\u522b\u80da\u7cfb\u5c0f\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6709\u9762\u5411\u591a\u79cd\u6d4b\u5e8f\u6280\u672f\u7684\u8bad\u7ec3\u6a21\u578b\uff0c\u53ef\u8f93\u51fa gVCF<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u987b\u5339\u914d\u6570\u636e\u7c7b\u578b\uff0cGPU \u52a0\u901f\u4ec5\u8986\u76d6\u90e8\u5206\u6b65\u9aa4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u5199\u3001\u53ef\u9009 GPU\u3002WGS \u6279\u91cf\u65f6\u5206\u522b\u6d4b\u6837\u4f8b\u751f\u6210\u548c\u63a8\u65ad<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/google\/deepvariant\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"050\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">050\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/glnexus-aldh2-four-twelve-sample-joint-genotyping\/\">GLnexus<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a\u591a\u6837\u672c gVCF \u8054\u5408\u5206\u578b\u6210\u961f\u5217\u53d8\u5f02\u96c6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u9488\u5bf9 DeepVariant \u7b49\u8f93\u5165\u914d\u7f6e\u5408\u5e76\u89c4\u5219<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6837\u672c\u53c2\u8003\u7248\u672c\u3001\u8c03\u7528\u6d41\u7a0b\u548c\u914d\u7f6e\u9700\u8981\u4e00\u81f4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u672c\u5730\u76d8\u3002\u6837\u672c\u6570\u4e0e\u8054\u5408\u8986\u76d6\u533a\u57df\u4e00\u8d77\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dnanexus-rnd\/GLnexus\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"051\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">051\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/freebayes-pooled-alternate-count-fraction-denominators\/\">FreeBayes<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u5355\u500d\u578b\u6a21\u578b\u68c0\u6d4b\u5c0f\u53d8\u5f02\u548c\u591a\u7b49\u4f4d\u4f4d\u70b9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8bbe\u7f6e\u500d\u6027\uff0c\u4e5f\u80fd\u5904\u7406\u6df7\u6c60\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u6df1\u5ea6\u6216\u590d\u6742\u533a\u57df\u4ee3\u4ef7\u9ad8\uff0c\u9891\u7387\u9608\u503c\u9700\u8d34\u5408\u5b9e\u9a8c\u8bbe\u8ba1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5927\u57fa\u56e0\u7ec4\u6309\u533a\u95f4\u5e76\u884c\uff0c\u9ad8\u6df1\u5ea6\u6837\u672c\u5355\u533a\u95f4\u53ef\u80fd\u62d6\u5c3e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/freebayes\/freebayes\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"052\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">052\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/dragen-dragmap-reference-mask-split-read-boundary\/\">DRAGEN<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528 Illumina \u52a0\u901f\u5e73\u53f0\u8fd0\u884c\u6bd4\u5bf9\u3001\u53d8\u5f02\u68c0\u6d4b\u7b49\u6d41\u7a0b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f6f\u786c\u4ef6\u914d\u5957\uff0c\u9002\u5408\u5df2\u6709\u5e73\u53f0\u7684\u6d4b\u5e8f\u751f\u4ea7\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90e8\u7f72\u53d7\u5382\u5546\u652f\u6301\u7684\u672c\u5730\u5e73\u53f0\u3001\u4e91\u4ea7\u54c1\u53ca\u6388\u6743\u7ea6\u675f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u4e13\u7528\u5e73\u53f0\u3001I\/O\u3002\u5148\u786e\u8ba4\u8fd0\u884c\u5e73\u53f0\u548c\u53ef\u8fc1\u79fb\u7684\u4e0a\u4e0b\u6e38\u73af\u8282<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.illumina.com\/products\/by-type\/informatics-products\/dragen-secondary-analysis.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"053\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">053\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/parabricks-fq2bam-cigar-three-lengths-coordinate-audit\/\">NVIDIA Parabricks<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528 GPU \u52a0\u901f\u53d7\u652f\u6301\u7684\u6bd4\u5bf9\u548c\u53d8\u5f02\u68c0\u6d4b\u6d41\u7a0b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8ba9 WGS \u7684\u82e5\u5e72\u957f\u6b65\u9aa4\u5171\u4eab\u4e00\u5957 GPU \u5de5\u4f5c\u73af\u5883<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u652f\u6301\u7684 GPU\u3001\u663e\u5b58\u548c\u5177\u4f53\u52a0\u901f\u73af\u8282\u968f\u5de5\u5177\u53ca\u7248\u672c\u800c\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001CPU\u3001\u4e34\u65f6\u76d8\u3002\u6309\u7ba1\u7ebf\u3001\u8bfb\u6df1\u548c\u540c\u65f6\u5728\u8dd1\u7684\u6837\u672c\u6570\u8bd5\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/docs.nvidia.com\/clara\/parabricks\/about-parabricks\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"054\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">054\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/strelka2-somatic-tier1-snv-indel-vaf\/\">Strelka2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u68c0\u6d4b\u80da\u7cfb\u6216\u80bf\u7624\u2013\u6b63\u5e38\u914d\u5bf9\u7684\u5c0f\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6210\u719f\u6d41\u7a0b\u53ef\u590d\u73b0\u65e2\u6709\u77ed\u8bfb\u957f\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0a\u6e38\u4ed3\u5e93\u5df2\u5f52\u6863\uff0c\u65b0\u961f\u5217\u6cbf\u7528\u524d\u9700\u8bc4\u4f30\u7248\u672c\u7ef4\u62a4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5b58\u91cf WGS \u961f\u5217\u590d\u8dd1\u4e0e\u533a\u95f4\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Illumina\/strelka\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"055\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">055\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/manta-breakend-pairs-mateid-split-read-evidence\/\">Manta<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u914d\u5bf9\u77ed\u8bfb\u957f\u53ca\u5c40\u90e8\u7ec4\u88c5\u8bc6\u522b\u7ed3\u6784\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5904\u7406\u80da\u7cfb\u6216\u80bf\u7624\u2013\u6b63\u5e38\u914d\u5bf9\uff0c\u8f93\u51fa\u65ad\u70b9\u5019\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0a\u6e38\u4ed3\u5e93\u5df2\u5f52\u6863\uff0c\u91cd\u590d\u533a\u65ad\u70b9\u4ecd\u53d7\u77ed\u8bfb\u957f\u9650\u5236<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5b58\u91cf\u961f\u5217\u5168\u57fa\u56e0\u7ec4\u91cd\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Illumina\/manta\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"056\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">056\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/delly-breakpoint-sites-genotypes-normal-library-failure\/\">DELLY<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7efc\u5408\u5f02\u5e38\u8bfb\u5bf9\u4e0e\u88c2\u5206\u8bfb\u6bb5\u68c0\u6d4b\u7ed3\u6784\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5bf9\u5019\u9009\u4e8b\u4ef6\u518d\u5206\u578b\uff0c\u65b9\u4fbf\u8de8\u6837\u672c\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u590d\u6742\u91cd\u6392\u4e0e\u4f4e\u53ef\u6bd4\u5bf9\u533a\u57df\u7684\u65ad\u70b9\u9700\u5176\u4ed6\u8bc1\u636e\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u76d8\u3002\u4e8b\u4ef6\u96c6\u8de8\u961f\u5217\u5206\u578b\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dellytools\/delly\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"057\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">057\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/gridss2-breakend-inserted-sequences-to-fasta\/\">GRIDSS2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u901a\u8fc7\u65ad\u70b9\u7ec4\u88c5\u68c0\u6d4b\u4f53\u7ec6\u80de\u7ed3\u6784\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4fdd\u7559\u5355\u65ad\u7aef\u548c\u7ec4\u88c5\u8bc1\u636e\uff0c\u9002\u5408\u590d\u6742\u91cd\u6392\u7814\u7a76<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ec4\u88c5\u4e2d\u95f4\u6587\u4ef6\u8f83\u5927\uff0c\u8fc7\u6ee4\u80cc\u666f\u566a\u58f0\u9700\u5339\u914d\u7684\u5bf9\u7167<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u9ad8\u6df1\u5ea6\u80bf\u7624\u5168\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/PapenfussLab\/gridss\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"058\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">058\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/svaba-local-assembly-24bp-tumor-insertion\/\">SvABA<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u5168\u57fa\u56e0\u7ec4\u5c40\u90e8\u7ec4\u88c5\u5bfb\u627e\u7ed3\u6784\u53d8\u5f02\u548c\u63d2\u5165\u7f3a\u5931\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u540c\u4e00\u6d41\u7a0b\u4e2d\u68c0\u67e5\u77ed indel \u4e0e\u8f83\u5927\u7684\u65ad\u70b9<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u80bf\u7624\u7eaf\u5ea6\u6216\u4f4e\u8986\u76d6\u533a\u57df\u53ef\u80fd\u7f3a\u5c11\u7ec4\u88c5\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u9ad8\u6df1\u5ea6\u80bf\u7624\u2013\u6b63\u5e38\u914d\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/walaj\/svaba\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"059\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">059\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/ensembl-vep-filter-matched-transcripts-alts-genotypes\/\">Ensembl VEP<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6309\u8f6c\u5f55\u672c\u6ce8\u91ca\u53d8\u5f02\u540e\u679c\u5e76\u53e0\u52a0\u63d2\u4ef6\u6570\u636e\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u79bb\u7ebf\u7528\u7f13\u5b58\uff0c\u652f\u6301\u591a\u8f6c\u5f55\u672c\u548c\u6279\u91cf\u529f\u80fd\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7269\u79cd\u3001\u7ec4\u88c5\u3001\u7f13\u5b58\u53ca\u63d2\u4ef6\u7248\u672c\u5fc5\u987b\u5bf9\u5e94<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u7f13\u5b58\u76d8\u3002\u5168\u57fa\u56e0\u7ec4\u961f\u5217\u52a0\u591a\u63d2\u4ef6\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Ensembl\/ensembl-vep\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"060\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">060\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/snpeff-two-transcripts-missense-intronic-codon\/\">SnpEff<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u672c\u5730\u57fa\u56e0\u6a21\u578b\u9884\u6d4b\u53d8\u5f02\u7684\u8f6c\u5f55\u672c\u540e\u679c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u81ea\u5efa\u7269\u79cd\u6570\u636e\u5e93\uff0c\u9002\u5408\u6d41\u7a0b\u5316\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6ce8\u91ca\u51c6\u786e\u6027\u53d6\u51b3\u4e8e\u53c2\u8003\u57fa\u56e0\u6a21\u578b\u548c\u8f6c\u5f55\u672c\u9009\u62e9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5355\u4e2a\u53d8\u5f02\u8868\u8f83\u8f7b\uff0c\u5927\u961f\u5217\u6ce8\u91ca\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/pcingola\/SnpEff\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-04\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u957f\u8bfb\u957f\u3001\u57fa\u56e0\u7ec4\u7ec4\u88c5\u4e0e\u8d28\u91cf\u8bc4\u4f30\uff08061\u2013080\uff09<\/summary>\n<p>\u628a\u8bfb\u957f\u3001\u6d4b\u5e8f\u6280\u672f\u3001\u9884\u8ba1\u500d\u6027\u548c\u662f\u5426\u9700\u8981\u62c6\u5206\u5355\u500d\u578b\u4e00\u8d77\u7eb3\u5165\u9009\u578b\u3002\u6bd4\u8f83\u7ec4\u88c5\u65f6\u540c\u65f6\u67e5\u770b\u8fde\u7eed\u6027\u3001\u78b1\u57fa\u51c6\u786e\u6027\u3001\u4fdd\u5b88\u57fa\u56e0\u5b8c\u6574\u6027\u548c\u91cd\u590d\u5e26\u6765\u7684\u5197\u4f59\uff0c\u5355\u72ec\u4e00\u4e2a\u8f83\u9ad8\u7684 N50 \u4e0d\u80fd\u8bf4\u660e\u57fa\u56e0\u7ec4\u66f4\u5b8c\u6574\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"061\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">061\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/dorado-fast-hac-pod5-read-length-qscore-na24385\/\">Dorado<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a\u7eb3\u7c73\u5b54\u539f\u59cb\u7535\u6d41\u4fe1\u53f7\u8f6c\u6362\u4e3a\u78b1\u57fa\u5e8f\u5217\uff0c\u4e5f\u53ef\u8bc6\u522b\u4fee\u9970\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6279\u91cf\u91cd\u7b97\u65e7 POD5\uff0c\u6bd4\u8f83\u4e0d\u540c\u7cbe\u5ea6\u548c\u4fee\u9970\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u5fc5\u987b\u5339\u914d\u82af\u7247\u3001\u5316\u5b66\u7248\u672c\u548c\u91c7\u6837\u8bbe\u7f6e\uff0c\u539f\u59cb\u4fe1\u53f7\u8981\u4fdd\u7559<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u4fe1\u53f7\u76d8\u541e\u5410\u3002\u591a\u5f20\u6d41\u52a8\u69fd\u3001SUP \u6a21\u578b\u6216\u79ef\u538b\u6570\u636e\u91cd\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/software-docs.nanoporetech.com\/dorado\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"062\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">062\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/minimap2-transcript-splice-preset-intron-gap\/\">minimap2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6bd4\u5bf9\u957f\u8bfb\u957f\u3001\u8f6c\u5f55\u672c\u6216\u7ec4\u88c5\u5e8f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u5de5\u5177\u4ee5\u4e0d\u540c\u9884\u8bbe\u5904\u7406\u566a\u58f0\u8bfb\u6bb5\u3001\u526a\u63a5\u548c\u7ec4\u88c5\u5bf9\u9f50<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8de8\u5e73\u53f0\u6216\u9ad8\u5206\u6b67\u5e8f\u5217\u9700\u9009\u5bf9\u9884\u8bbe\uff0c\u91cd\u590d\u533a\u4ecd\u4f1a\u591a\u91cd\u5339\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001BAM \u5199\u76d8\u3002\u591a\u4efd\u5927\u57fa\u56e0\u7ec4\u957f\u8bfb\u957f\u6570\u636e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/lh3\/minimap2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"063\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">063\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/hifiasm-haplotypes-duplicate-contigs-homozygous-coverage\/\">hifiasm<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u9ad8\u51c6\u786e\u5ea6\u957f\u8bfb\u957f\u8fdb\u884c\u5206\u76f8\u57fa\u56e0\u7ec4\u7ec4\u88c5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ed3\u5408 Hi-C \u6216\u4eb2\u672c\u4fe1\u606f\u4fdd\u7559\u4e24\u5957\u5355\u500d\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8986\u76d6\u3001\u6742\u5408\u5ea6\u3001\u500d\u6027\u53ca\u53bb\u5197\u4f59\u8bbe\u7f6e\u5f71\u54cd\u7ec4\u88c5\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5927\u5185\u5b58\u3001CPU\u3002\u5927\u57fa\u56e0\u7ec4\u7684\u91cd\u53e0\u68c0\u6d4b\u3001\u5efa\u56fe\u548c\u591a\u6837\u672c\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/chhylp123\/hifiasm\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"064\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">064\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/verkko-gaf-node-coverage-fractional-alignment-rows\/\">Verkko<\/a><\/h3>\n<p style=\"margin:3px 0\">\u6574\u5408\u9ad8\u51c6\u786e\u5ea6\u4e0e\u8d85\u957f\u8bfb\u957f\uff0c\u7ec4\u88c5\u590d\u6742\u91cd\u590d\u533a\u57df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e0d\u540c\u8bfb\u957f\u8bc1\u636e\u53ef\u4e92\u8865\uff0c\u9002\u5408\u8ffd\u6c42\u7aef\u7c92\u5230\u7aef\u7c92\u7684\u9879\u76ee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bfb\u957f\u8d28\u91cf\u53ca\u8d85\u957f\u8986\u76d6\u5f71\u54cd\u8de8\u91cd\u590d\u80fd\u529b\uff0c\u591a\u9636\u6bb5\u6d41\u7a0b\u6392\u9519\u8f83\u91cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u578b\u57fa\u56e0\u7ec4\u8ffd\u6c42\u7aef\u7c92\u5230\u7aef\u7c92\u7ec4\u88c5\u65f6\uff0c\u5206\u9636\u6bb5\u6d4b\u5cf0\u503c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/marbl\/verkko\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"065\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">065\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/flye-plasmid-circularization-spanning-reads\/\">Flye<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u957f\u8bfb\u957f\u91cd\u590d\u56fe\u505a\u4ece\u5934\u7ec4\u88c5\uff0c\u4e5f\u6709\u5b8f\u57fa\u56e0\u7ec4\u6a21\u5f0f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5904\u7406\u591a\u7c7b\u957f\u8bfb\u957f\uff0c\u8f93\u5165\u5230\u7ec4\u88c5\u6d41\u7a0b\u8f83\u76f4\u63a5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u76f8\u4f3c\u91cd\u590d\u548c\u83cc\u682a\u6df7\u5408\u4f1a\u5f15\u5165\u56fe\u6b67\u4e49<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u57fa\u56e0\u7ec4\u5927\u5c0f\u3001\u8986\u76d6\u6df1\u5ea6\u53ca\u6df7\u5408\u7fa4\u843d\u590d\u6742\u5ea6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/mikolmogorov\/Flye\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"066\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">066\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/canu-hifi-unassembled-contigs-overlap-covered-length\/\">Canu<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u957f\u8bfb\u957f\u505a\u7ea0\u9519\u3001\u4fee\u526a\u548c\u7ec4\u88c5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u591a\u4e2a\u9636\u6bb5\u53ef\u5728\u96c6\u7fa4\u8c03\u5ea6\uff0c\u9002\u5408\u590d\u73b0\u957f\u8bfb\u957f\u7ec4\u88c5\u9879\u76ee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u8986\u76d6\u5927\u57fa\u56e0\u7ec4\u7684\u7ea0\u9519\u548c\u91cd\u53e0\u8ba1\u7b97\u5f88\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u770b\u7ea0\u9519\u9636\u6bb5\u7684 CPU \u6838\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/marbl\/canu\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"067\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">067\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/masurca-superreads-kmer-overlap-distinct-reference-bases\/\">MaSuRCA<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u77ed\u8bfb\u957f\u5e76\u53ef\u7ed3\u5408\u957f\u8bfb\u957f\u505a\u6df7\u5408\u7ec4\u88c5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u590d\u7528\u5df2\u6709\u77ed\u8bfb\u957f\u6570\u636e\uff0c\u9002\u5408\u975e\u6a21\u5f0f\u7269\u79cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6587\u5e93\u53c2\u6570\u3001\u9519\u8bef\u7387\u53ca\u4e0d\u540c\u6570\u636e\u7684\u642d\u914d\u4f1a\u5f71\u54cd\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5927\u5185\u5b58\u3001CPU\u3001\u4e34\u65f6\u76d8\u3002\u5927\u578b\u52a8\u690d\u7269\u57fa\u56e0\u7ec4\u6df7\u5408\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/alekseyzimin\/masurca\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"068\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">068\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/racon-unpolished-contigs-window-trimming-coverage\/\">Racon<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u8bfb\u6bb5\u5bf9\u8349\u56fe\u7ec4\u88c5\u8fdb\u884c\u5171\u8bc6\u7ea0\u9519\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f93\u5165\u8f93\u51fa\u6e05\u6670\uff0c\u53ef\u4e0e\u4e0d\u540c\u957f\u8bfb\u957f\u6bd4\u5bf9\u5de5\u5177\u7ec4\u5408<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5404\u8f6e\u90fd\u9700\u53ef\u9760\u6bd4\u5bf9\uff0c\u91cd\u590d\u8fed\u4ee3\u6536\u76ca\u9700\u7528\u72ec\u7acb\u6307\u6807\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u8d85\u957f\u7ec4\u88c5\u3001\u591a\u8f6e\u6bd4\u5bf9\u4e0e\u629b\u5149<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/lbcb-sci\/racon\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"069\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">069\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/medaka-consensus-filled-gaps-vs-masked-n-coverage\/\">Medaka<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u795e\u7ecf\u7f51\u7edc\u5bf9\u7eb3\u7c73\u5b54\u7ec4\u88c5\u505a\u5171\u8bc6\u4fee\u6b63\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4f7f\u7528\u4e0e\u6d4b\u5e8f\u4f53\u7cfb\u76f8\u5339\u914d\u7684\u6a21\u578b\u7ec6\u5316\u78b1\u57fa<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u4e0e\u78b1\u57fa\u8bc6\u522b\u7248\u672c\u4e0d\u5339\u914d\u4f1a\u5f71\u54cd\u6548\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u8bfb\u76d8\u3002\u5927\u57fa\u56e0\u7ec4\u3001\u591a\u6279\u6b21\u6216\u9ad8\u6df1\u5ea6\u91cd\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/nanoporetech\/medaka\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"070\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">070\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/unicycler-shigella-plasmid-low-depth-bridges-circularity\/\">Unicycler<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u77ed\u8bfb\u957f\u5e76\u7ed3\u5408\u957f\u8bfb\u957f\u5bf9\u7ec6\u83cc\u5206\u79bb\u682a\u8fdb\u884c\u6df7\u5408\u7ec4\u88c5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u7528\u8f83\u4f4e\u8986\u76d6\u7684\u957f\u8bfb\u957f\u8de8\u63a5\u77ed\u8bfb\u957f\u7ec4\u88c5\u56fe\uff0c\u9002\u5408\u5df2\u6709\u4e24\u7c7b\u6570\u636e\u7684\u9879\u76ee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u77ed\u8bfb\u957f\u56fe\u8fc7\u4e8e\u7834\u788e\u65f6\u96be\u4ee5\u8de8\u63a5\uff0c\u6709\u5145\u8db3\u9ad8\u51c6\u786e\u957f\u8bfb\u957f\u65f6\u5e94\u91cd\u65b0\u8bc4\u4f30\u7ec4\u88c5\u8def\u7ebf<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5355\u83cc\u682a\u8f83\u8f7b\uff0c\u6301\u7eed\u9001\u6837\u7684\u5206\u79bb\u682a\u961f\u5217\u53ef\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/rrwick\/Unicycler\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"071\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">071\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/yahs-hic-scaffold-reversed-contig-contact-ablation\/\">YaHS<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528 Hi-C \u8054\u7cfb\u5c06 contig \u8fde\u6210\u67d3\u8272\u4f53\u7ea7 scaffold\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6d41\u7a0b\u76f4\u63a5\uff0c\u80fd\u901a\u8fc7\u63a5\u89e6\u56fe\u6838\u67e5\u62fc\u63a5\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000Hi-C \u6587\u5e93\u8d28\u91cf\u548c\u8f93\u5165\u7ec4\u88c5\u4e2d\u7684\u9519\u62fc\u4f1a\u4f20\u9012\u5230 scaffold<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u57fa\u56e0\u7ec4\u3001\u9ad8\u6df1\u5ea6 Hi-C \u53ca\u53cd\u590d\u4fee\u8ba2<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/c-zhou\/yahs\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"072\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">072\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/ragtag-reference-scaffolding-gap-n-coordinate-shift\/\">RagTag<\/a><\/h3>\n<p style=\"margin:3px 0\">\u53c2\u7167\u8fd1\u7f18\u57fa\u56e0\u7ec4\u8fdb\u884c scaffold \u6784\u5efa\u548c\u4fee\u6b63\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fbf\u4e8e\u5feb\u901f\u5f62\u6210\u67d3\u8272\u4f53\u6846\u67b6\u5e76\u8ffd\u6eaf\u7247\u6bb5\u4f4d\u7f6e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u5f15\u5bfc\u53ef\u80fd\u63a9\u76d6\u76ee\u6807\u6837\u672c\u7684\u771f\u5b9e\u91cd\u6392<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u54c1\u7cfb\u5168\u57fa\u56e0\u7ec4\u5bf9\u9f50\u6bd4\u5355\u4efd\u811a\u624b\u67b6\u66f4\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/malonge\/RagTag\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"073\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">073\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/purge-dups-internal-terminal-get-seqs-23-n-gap\/\">purge_dups<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u6df1\u5ea6\u548c\u81ea\u6bd4\u5bf9\u8bc6\u522b\u7ec4\u88c5\u4e2d\u591a\u4f59\u7684\u5355\u500d\u578b\u7247\u6bb5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u51cf\u5c11\u6742\u5408\u4e8c\u500d\u4f53\u7ec4\u88c5\u7684\u91cd\u590d\u8868\u793a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9608\u503c\u4e0d\u5408\u9002\u53ef\u80fd\u8bef\u5220\u771f\u5b9e\u91cd\u590d\u6216\u591a\u500d\u4f53\u540c\u6e90\u62f7\u8d1d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u6bd4\u5bf9\u6587\u4ef6\u3002\u5927\u578b\u6742\u5408\u57fa\u56e0\u7ec4\u5168\u91cf\u81ea\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dfguan\/purge_dups\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"074\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">074\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/merqury-qv-read-coverage-gap-kmer-assembly\/\">Merqury<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u51c6\u786e\u6d4b\u5e8f\u8bfb\u6bb5\u7684 k-mer \u8bc4\u4f30\u7ec4\u88c5\u8d28\u91cf\u548c\u5b8c\u6574\u6027\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u65e0\u9700\u53c2\u8003\u57fa\u56e0\u7ec4\u5373\u53ef\u4f30\u7b97 QV\uff0c\u8fd8\u53ef\u8bc4\u4f30\u5206\u76f8<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u8db3\u91cf\u4e14\u8bef\u5dee\u4f4e\u7684\u8bc4\u4f30\u8bfb\u6bb5\uff0ck \u7684\u9009\u62e9\u5f71\u54cd\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001k-mer \u5e93\u53ca\u4e34\u65f6\u76d8\u3002\u5927\u57fa\u56e0\u7ec4\u3001\u591a\u5957\u5019\u9009\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/marbl\/merqury\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"075\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">075\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/quast-n50-nga50-translocations-equal-coverage\/\">QUAST<\/a><\/h3>\n<p style=\"margin:3px 0\">\u8ba1\u7b97\u8fde\u7eed\u6027\uff0c\u5e76\u53ef\u4e0e\u53c2\u8003\u5bf9\u9f50\u68c0\u67e5\u9519\u62fc\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u62a5\u544a\u53ef\u5bf9\u7167\u591a\u5957\u7ec4\u88c5\u7684\u591a\u9879\u6307\u6807<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u4e0e\u6837\u672c\u7684\u771f\u5b9e\u7ed3\u6784\u5dee\u5f02\u53ef\u80fd\u88ab\u8ba1\u4e3a\u9519\u62fc<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u578b\u771f\u6838\u53c2\u8003\u53ca\u591a\u7248\u672c\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ablab\/quast\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"076\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">076\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/busco-proteome-completeness-duplicated-markers-ecoli\/\">BUSCO<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7528\u8c31\u7cfb\u4fdd\u5b88\u7684\u5355\u62f7\u8d1d\u76f4\u7cfb\u540c\u6e90\u57fa\u56e0\u8bc4\u4f30\u5b8c\u6574\u6027\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5728\u540c\u4e00\u8c31\u7cfb\u5185\u6bd4\u8f83\u57fa\u56e0\u7ec4\u3001\u8f6c\u5f55\u7ec4\u6216\u86cb\u767d\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8c31\u7cfb\u5e93\u9009\u62e9\u53ca\u771f\u5b9e\u590d\u5236\u4f1a\u5f71\u54cd\u5b8c\u6574\u3001\u91cd\u590d\u548c\u7f3a\u5931\u7684\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u6574\u6279\u771f\u6838\u7ec4\u88c5\u91cd\u8dd1\u548c\u57fa\u56e0\u9884\u6d4b\u9636\u6bb5<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/busco.ezlab.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"077\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">077\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/clair3-pileup-full-alignment-global-quality-threshold-ties\/\">Clair3<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u957f\u8bfb\u957f\u6bd4\u5bf9\u8c03\u7528\u80da\u7cfb\u5c0f\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7ed3\u5408\u5feb\u901f pileup \u4e0e\u5168\u6bd4\u5bf9\u6a21\u578b\uff0c\u53ef\u9002\u914d\u82e5\u5e72\u957f\u8bfb\u957f\u5e73\u53f0<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u8981\u4e0e\u5e73\u53f0\u3001\u7cbe\u5ea6\u548c\u78b1\u57fa\u8bc6\u522b\u65b9\u5f0f\u5339\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u53ef\u9009 GPU\u3001\u8bfb\u76d8\u3002\u6279\u91cf WGS \u53d6\u51b3\u4e8e\u6240\u9009\u540e\u7aef<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/HKU-BAL\/Clair3\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"078\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">078\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/sniffles2-joint-sv-called-reference-versus-no-coverage\/\">Sniffles2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5728\u957f\u8bfb\u957f\u4e2d\u68c0\u6d4b\u5e76\u8054\u5408\u5206\u6790\u7ed3\u6784\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4fdd\u7559\u5355\u6837\u672c\u8bc1\u636e\u4f9b\u961f\u5217\u5408\u5e76\uff0c\u9002\u5408\u957f\u8bfb\u957f\u7814\u7a76<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8986\u76d6\u3001\u5d4c\u5408\u6bd4\u4f8b\u548c\u91cd\u590d\u5e8f\u5217\u4f1a\u9650\u5236\u68c0\u51fa<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u76d8\u3001\u5185\u5b58\u3002\u591a\u6837\u672c\u5168\u57fa\u56e0\u7ec4\u6216\u5d4c\u5408\u7b5b\u67e5<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/fritzsedlazeck\/Sniffles\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"079\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">079\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/whatshap-phasing-depth-unchanged-read-bridges-phase-sets\/\">WhatsHap<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528\u8de8\u53d8\u5f02\u8bfb\u6bb5\u5bf9\u57fa\u56e0\u578b\u8fdb\u884c\u5206\u76f8\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7eb3\u5165\u5bb6\u7cfb\u4fe1\u606f\u5e76\u8f93\u51fa\u53ef\u8ffd\u8e2a\u7684\u76f8\u4f4d\u5757<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5b9a\u76f8\u8fde\u7eed\u6027\u53d6\u51b3\u4e8e\u8bfb\u957f\u8986\u76d6\u53ca\u8f93\u5165\u53d8\u5f02\u53ef\u9760\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u9ad8\u8986\u76d6\u3001\u590d\u6742\u500d\u6027\u6216\u5927\u91cf\u6837\u672c\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/whatshap.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"080\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">080\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/haphic-refsort-scaffold-reverse-complement-agp-coordinate\/\">HapHiC<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece Hi-C \u6570\u636e\u6784\u5efa\u5206\u5355\u500d\u578b\u7684\u67d3\u8272\u4f53\u7ea7 scaffold\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u76f4\u63a5\u5904\u7406\u9ad8\u6742\u5408\u6216\u591a\u500d\u4f53\u7ec4\u88c5\u7684\u5206\u7fa4\u4e0e\u6392\u5e8f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7b49\u4f4d contig \u6df7\u6dc6\u53ca Hi-C \u6570\u636e\u504f\u501a\u4f1a\u5f71\u54cd\u67d3\u8272\u4f53\u5206\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u63a5\u89e6\u56fe\u8bfb\u5199\u3002\u591a\u500d\u4f53\u548c\u5927\u578b\u690d\u7269\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/zengxiaofei\/HapHiC\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-05\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u6cdb\u57fa\u56e0\u7ec4\u3001\u6bd4\u8f83\u57fa\u56e0\u7ec4\u4e0e\u57fa\u56e0\u6ce8\u91ca\uff08081\u2013100\uff09<\/summary>\n<p>\u591a\u7ec4\u88c5\u6bd4\u8f83\u524d\u7edf\u4e00\u7ec4\u88c5\u7248\u672c\u3001\u5e8f\u5217\u540d\u79f0\u53ca\u57fa\u56e0\u6a21\u578b\u3002\u56fe\u7ed3\u6784\u80fd\u8868\u793a\u4e0d\u540c\u4e2a\u4f53\u643a\u5e26\u7684\u5e8f\u5217\u8def\u5f84\uff0c\u53c2\u8003\u5750\u6807\u5219\u4fbf\u4e8e\u4e0e\u5df2\u6709\u6ce8\u91ca\u5bf9\u7167\u3002\u8bbe\u8ba1\u7edf\u8ba1\u65f6\u5148\u51b3\u5b9a\u7814\u7a76\u5355\u4f4d\u662f\u78b1\u57fa\u3001\u57fa\u56e0\u3001\u540c\u6e90\u7c07\u8fd8\u662f\u5b8c\u6574\u7684\u7ed3\u6784\u4e8b\u4ef6\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"081\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">081\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/cactus-hal-liftover-interval-count-versus-base-coverage\/\">Cactus\uff08\u542b Minigraph-Cactus\uff09<\/a><\/h3>\n<p style=\"margin:3px 0\">\u505a\u591a\u57fa\u56e0\u7ec4\u5168\u957f\u6bd4\u5bf9\u5e76\u6784\u5efa\u6cdb\u57fa\u56e0\u7ec4\u56fe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fdd\u7559\u8de8\u6837\u672c\u540c\u6e90\u5bf9\u5e94\uff0c\u53ef\u7528\u4e8e\u56fe\u6784\u5efa\u4e0e\u5750\u6807\u6295\u5f71<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5de5\u4f5c\u6d41\u591a\u9636\u6bb5\uff0c\u7269\u79cd\u8ddd\u79bb\u3001\u5f15\u5bfc\u6811\u548c\u6837\u672c\u96c6\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u96c6\u7fa4 CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u591a\u5957\u54fa\u4e73\u52a8\u7269\u6216\u4f5c\u7269\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ComparativeGenomicsToolkit\/cactus\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"082\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">082\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/minigraph-alternate-backbones-insertion-bubble-and-no-call\/\">minigraph<\/a><\/h3>\n<p style=\"margin:3px 0\">\u4ece\u591a\u4efd\u7ec4\u88c5\u5feb\u901f\u6784\u5efa\u7ed3\u6784\u53d8\u5f02\u6cdb\u57fa\u56e0\u7ec4\u56fe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u4ee5\u53c2\u8003\u4e3a\u9aa8\u67b6\u5148\u68b3\u7406\u8f83\u5927\u7684\u7ed3\u6784\u5dee\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u56fe\u6784\u9020\u53d7\u9aa8\u67b6\u548c\u8f93\u5165\u987a\u5e8f\u5f71\u54cd\uff0c\u5c0f\u53d8\u5f02\u8868\u8fbe\u6709\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u57fa\u56e0\u7ec4\u4e0e\u591a\u5355\u500d\u578b\u9010\u4efd\u52a0\u5165<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/lh3\/minigraph\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"083\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">083\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/vg-graph-edges-versus-sample-haplotype-paths\/\">vg<\/a><\/h3>\n<p style=\"margin:3px 0\">\u57fa\u4e8e\u53d8\u5f02\u56fe\u8fdb\u884c\u5efa\u7d22\u5f15\u3001\u8bfb\u6bb5\u6620\u5c04\u548c\u5206\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u56fe\u4e0a\u53ef\u8868\u8fbe\u591a\u4e2a\u7b49\u4f4d\u8def\u5f84\uff0c\u9002\u5408\u591a\u6837\u5316\u53c2\u8003<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u56fe\u7d22\u5f15\u5efa\u8bbe\u6210\u672c\u9ad8\uff0c\u4e0d\u540c\u56fe\u7c7b\u578b\u53ca\u4e0b\u6e38\u5750\u6807\u8981\u7edf\u4e00<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u7d22\u5f15\u76d8\u3002\u7279\u522b\u5173\u6ce8\u5efa\u7d22\u5f15\u548c\u961f\u5217\u6620\u5c04<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/vgteam\/vg\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"084\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">084\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/pggb-partition-alignment-length-weight-community-contigs\/\">PGGB<\/a><\/h3>\n<p style=\"margin:3px 0\">\u901a\u8fc7\u5e8f\u5217\u95f4\u6bd4\u5bf9\u6784\u5efa\u6cdb\u57fa\u56e0\u7ec4\u56fe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u76f4\u63a5\u6bd4\u8f83\u591a\u4e2a\u5355\u500d\u578b\uff0c\u4fdd\u7559\u590d\u6742\u53d8\u5f02\u8def\u5f84<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5168\u4f53\u6837\u672c\u95f4\u6bd4\u5bf9\u5f00\u9500\u5927\uff0c\u9ad8\u91cd\u590d\u533a\u57df\u9700\u8981\u5206\u533a\u4e0e\u53c2\u6570\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u53c2\u4e0e\u7ec4\u88c5\u6570\u548c\u5e8f\u5217\u76f8\u4f3c\u6027\u51b3\u5b9a\u89c4\u6a21<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/pangenome\/pggb\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"085\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">085\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/odgi-position-graph-path-inversion-offset-dna-check\/\">ODGI<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u6cdb\u57fa\u56e0\u7ec4\u56fe\u6392\u5e8f\u3001\u63d0\u53d6\u5b50\u56fe\u5e76\u53ef\u89c6\u5316\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5bf9\u590d\u6742\u56fe\u505a\u5c40\u90e8\u5206\u6790\u5e76\u68c0\u67e5\u4e0d\u540c\u8def\u5f84<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u56fe\u5e03\u5c40\u4e0e\u6392\u5e8f\u4f1a\u6539\u53d8\u5c55\u793a\uff0c\u89e3\u8bfb\u9700\u8981\u8def\u5f84\u548c\u5750\u6807\u80cc\u666f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u67d3\u8272\u4f53\u7ea7\u591a\u8def\u5f84\u56fe\u5e03\u5c40\u3001\u6392\u5e8f\u4e0e\u7edf\u8ba1<\/p>\n<p style=\"margin:2px 0\"><a class=\"guide-practice-item\" href=\"https:\/\/www.biocloudservice.com\/wordpress\/wp-content\/uploads\/2026\/11\/ysx-bioinformatics-practice-074-085-b0103eb15d21.zip\">\u4e0b\u8f7d\u672c\u9879\u5b9e\u8dd1\u811a\u672c\uff08\u5408\u96c6 ZIP\uff09<\/a><\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/pangenome\/odgi\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"086\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">086\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/graphaligner-high-mapq-split-gaf-graph-missing-allele\/\">GraphAligner<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a\u957f\u8bfb\u957f\u6bd4\u5bf9\u5230\u5e8f\u5217\u56fe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u8bfb\u6bb5\u76f4\u63a5\u8d70\u56fe\u8def\u5f84\uff0c\u9002\u5408\u7ed3\u6784\u590d\u6742\u533a\u57df<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u56fe\u8d28\u91cf\u3001\u91cd\u590d\u8def\u5f84\u53ca\u5e26\u5bbd\u8bbe\u7f6e\u5f71\u54cd\u6620\u5c04\u6b67\u4e49\u548c\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u56fe\u4e0a\u7684\u5168\u57fa\u56e0\u7ec4\u957f\u8bfb\u957f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/maickrau\/GraphAligner\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"087\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">087\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/pangenie-panel-missing-homozygous-variant-same-reads\/\">PanGenie<\/a><\/h3>\n<p style=\"margin:3px 0\">\u7ed3\u5408\u8f93\u5165\u5355\u500d\u578b\u9762\u677f\u53ca k-mer \u5bf9\u53d8\u5f02\u8fdb\u884c\u57fa\u56e0\u5206\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5229\u7528\u4eba\u7fa4\u5355\u500d\u578b\u8865\u5145\u77ed\u8bfb\u957f\u96be\u4ee5\u76f4\u63a5\u6bd4\u5bf9\u7684\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u9762\u677f\u4ee3\u8868\u6027\u51b3\u5b9a\u53ef\u8bc6\u522b\u7684\u7b49\u4f4d\u7c7b\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001k-mer \u78c1\u76d8\u3002\u961f\u5217\u6837\u672c\u548c\u9762\u677f\u6269\u5c55<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/eblerjana\/pangenie\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"088\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">088\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/mummer4-nucmer-repeat-unique-flanks-delta-filter-best-hit\/\">MUMmer4<\/a><\/h3>\n<p style=\"margin:3px 0\">\u505a\u57fa\u56e0\u7ec4\u6216\u7ec4\u88c5\u95f4\u7684\u9ad8\u6548\u6210\u5bf9\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u67e5\u770b\u5171\u7ebf\u3001\u9519\u914d\u53ca\u91cd\u6392\uff0c\u4e3a\u7ec4\u88c5\u8bc4\u4f30\u63d0\u4f9b\u5750\u6807<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5927\u91cf\u8fd1\u540c\u6e90\u91cd\u590d\u4f1a\u4ea7\u751f\u5197\u4f59\u5339\u914d\uff0c\u7b5b\u9009\u7b56\u7565\u5f71\u54cd\u4e0b\u6e38<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u57fa\u56e0\u7ec4\u4e0e\u591a\u5bf9\u7ec4\u88c5\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/mummer4\/mummer\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"089\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">089\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/miniprot-protein-coverage-frameshift-one-base-exon\/\">miniprot<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5c06\u86cb\u767d\u5e8f\u5217\u4ee5\u526a\u63a5\u611f\u77e5\u65b9\u5f0f\u6bd4\u5bf9\u81f3\u57fa\u56e0\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5feb\u901f\u628a\u8fd1\u7f18\u7269\u79cd\u86cb\u767d\u6295\u5f71\u5230\u65b0\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fdc\u7f18\u540c\u6e90\u548c\u8fb9\u754c\u7cbe\u7ec6\u6ce8\u91ca\u4ecd\u9700\u8981\u8f6c\u5f55\u8bc1\u636e\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u7d22\u5f15\u76d8\u3002\u591a\u4e2a\u5927\u57fa\u56e0\u7ec4\u4e0e\u5927\u86cb\u767d\u5e93\u6279\u91cf\u6620\u5c04<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/lh3\/miniprot\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"090\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">090\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/liftoff-extra-gene-copies-complete-exon-mapping\/\">Liftoff<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5728\u7ec4\u88c5\u95f4\u8f6c\u79fb\u57fa\u56e0\u4e0e\u8f6c\u5f55\u672c\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fdd\u7559\u5e38\u89c1\u6ce8\u91ca\u5c42\u7ea7\uff0c\u4fbf\u4e8e\u7ed9\u8fd1\u7f18\u65b0\u53c2\u8003\u5feb\u901f\u8d77\u7a3f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5ea6\u5206\u6b67\u3001\u7ed3\u6784\u91cd\u6392\u6216\u62f7\u8d1d\u6570\u53d8\u5316\u5904\u5bb9\u6613\u6b67\u4e49<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u54c1\u7cfb\u7ec4\u88c5\u91cd\u590d\u6295\u5c04<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/agshumate\/Liftoff\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"091\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">091\u3000BRAKER<\/h3>\n<p style=\"margin:3px 0\">\u7ed3\u5408 RNA \u6216\u86cb\u767d\u8bc1\u636e\u8bad\u7ec3\u5e76\u9884\u6d4b\u771f\u6838\u57fa\u56e0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u8bc1\u636e\u6574\u5408\u3001\u8bad\u7ec3\u548c\u9884\u6d4b\u4e32\u6210\u53ef\u590d\u7528\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bc1\u636e\u8d28\u91cf\u5f71\u54cd\u6a21\u578b\uff0cGeneMark \u7b49\u4f9d\u8d56\u7684\u5b89\u88c5\u4e0e\u8bb8\u53ef\u9700\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u57fa\u56e0\u7ec4\u548c\u5927\u89c4\u6a21\u8bc1\u636e\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Gaius-Augustus\/BRAKER\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"092\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">092\u3000MAKER<\/h3>\n<p style=\"margin:3px 0\">\u6574\u5408\u91cd\u590d\u5c4f\u853d\u3001\u8f6c\u5f55\u672c\u3001\u86cb\u767d\u53ca\u9884\u6d4b\u6a21\u578b\u751f\u6210\u57fa\u56e0\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5206\u533a\u8fd0\u884c\u5e76\u9010\u8f6e\u66f4\u65b0\uff0c\u9002\u5408\u975e\u6a21\u5f0f\u7269\u79cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u5de5\u5177\u591a\uff0c\u8bad\u7ec3\u3001\u8bc1\u636e\u548c\u53c2\u6570\u7ba1\u7406\u5f71\u54cd\u8de8\u8f6e\u53ef\u6bd4\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5171\u4eab\u5b58\u50a8\u3002\u57fa\u56e0\u7ec4\u5206\u5757\u3001\u5e76\u884c\u7269\u79cd\u548c\u591a\u8f6e\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Yandell-Lab\/maker\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"093\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">093\u3000AUGUSTUS<\/h3>\n<p style=\"margin:3px 0\">\u6309\u7269\u79cd\u6a21\u578b\u9884\u6d4b\u771f\u6838\u57fa\u56e0\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u5f15\u5165\u5916\u90e8\u8bc1\u636e\u63d0\u793a\u5e76\u8bad\u7ec3\u7269\u79cd\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fdc\u7f18\u6a21\u578b\u6216\u4f4e\u8d28\u91cf\u8bad\u7ec3\u96c6\u53ef\u80fd\u9519\u5224\u5916\u663e\u5b50\u8fb9\u754c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5927\u57fa\u56e0\u7ec4\u626b\u63cf\u53ca\u53cd\u590d\u8bad\u7ec3\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Gaius-Augustus\/Augustus\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"094\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">094\u3000RepeatModeler<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5934\u6784\u5efa\u7269\u79cd\u7279\u5f02\u7684\u91cd\u590d\u5e8f\u5217\u5bb6\u65cf\u5e93\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u8865\u5145\u516c\u5171\u6570\u636e\u5e93\u4e2d\u7f3a\u5c11\u7684\u91cd\u590d\u5bb6\u65cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u91cd\u590d\u3001\u5d4c\u5957\u63d2\u5165\u548c\u788e\u7247\u4f1a\u589e\u52a0\u53bb\u5197\u4f59\u4e0e\u4eba\u5de5\u6574\u7406\u96be\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u9ad8\u91cd\u590d\u690d\u7269\u548c\u5927\u578b\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Dfam-consortium\/RepeatModeler\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"095\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">095\u3000RepeatMasker<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5df2\u77e5\u8bc6\u522b\u5e93\u5c4f\u853d\u6216\u6ce8\u91ca\u57fa\u56e0\u7ec4\u91cd\u590d\u5e8f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6210\u719f\u7684\u91cd\u590d\u5206\u7c7b\u4e0e\u5750\u6807\u8f93\u51fa\u53ef\u63a5\u57fa\u56e0\u6ce8\u91ca\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u679c\u53d7\u91cd\u590d\u5e93\u3001\u7269\u79cd\u548c\u641c\u7d22\u5f15\u64ce\u9009\u62e9\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u5168\u57fa\u56e0\u7ec4\u3001\u591a\u4e2a\u54c1\u7cfb\u4e0e\u591a\u6b21\u6362\u5e93\u91cd\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.repeatmasker.org\/RepeatMasker\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"096\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">096\u3000EDTA<\/h3>\n<p style=\"margin:3px 0\">\u81ea\u52a8\u8bc6\u522b\u5e76\u6574\u5408\u771f\u6838\u57fa\u56e0\u7ec4\u7684\u8f6c\u5ea7\u5143\u4ef6\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7efc\u5408\u7ed3\u6784\u8bc1\u636e\u548c\u540c\u6e90\u8bc1\u636e\uff0c\u9002\u5408\u690d\u7269\u8f6c\u5ea7\u5b50\u7814\u7a76<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u788e\u7247\u5316\u7ec4\u88c5\u53ca\u91cd\u590d\u5bc6\u96c6\u533a\u57df\u4f1a\u5f71\u54cd\u8fb9\u754c\u4e0e\u7c7b\u522b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u9ad8\u91cd\u590d\u690d\u7269\u548c\u591a\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/oushujun\/EDTA\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"097\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">097\u3000OrthoFinder<\/h3>\n<p style=\"margin:3px 0\">\u8de8\u7269\u79cd\u63a8\u65ad\u6b63\u4ea4\u57fa\u56e0\u7fa4\u3001\u57fa\u56e0\u6811\u548c\u590d\u5236\u4e8b\u4ef6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u4ece\u6574\u5957\u86cb\u767d\u7ec4\u751f\u6210\u53ef\u8ffd\u8e2a\u7684\u540c\u6e90\u5173\u7cfb<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9519\u8bef\u6ce8\u91ca\u4e0e\u5197\u4f59\u5f02\u6784\u4f53\u53ef\u626d\u66f2\u57fa\u56e0\u5bb6\u65cf\u5927\u5c0f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u7269\u79cd\u6570\u3001\u86cb\u767d\u6570\u548c\u57fa\u56e0\u6811\u6570\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/davidemms\/OrthoFinder\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"098\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">098\u3000MCScanX<\/h3>\n<p style=\"margin:3px 0\">\u6839\u636e\u540c\u6e90\u57fa\u56e0\u5339\u914d\u4e0e\u5750\u6807\u5bfb\u627e\u5171\u7ebf\u533a\u5757\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u6bd4\u8f83\u690d\u7269\u67d3\u8272\u4f53\u7ed3\u6784\u548c\u57fa\u56e0\u590d\u5236\u7c7b\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5f3a\u91cd\u6392\u6216\u6ce8\u91ca\u4e0d\u5b8c\u6574\u65f6\uff0c\u5171\u7ebf\u951a\u70b9\u53ef\u80fd\u4e0d\u8db3<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u57fa\u56e0\u7ec4\u540c\u6e90\u641c\u7d22\u5e38\u662f\u4e3b\u8981\u524d\u7f6e\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/wyp1125\/MCScanX\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"099\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">099\u3000SyRI<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6210\u5bf9\u7ec4\u88c5\u6bd4\u5bf9\u8bc6\u522b\u5171\u7ebf\u533a\u53ca\u7ed3\u6784\u91cd\u6392\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u533a\u5206\u5012\u4f4d\u3001\u6613\u4f4d\u4e0e\u5171\u7ebf\u533a\u57df\u5185\u7684\u5c0f\u53d8\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u9ad8\u8d28\u91cf\u7ec4\u88c5\u4e0e\u65b9\u5411\u6b63\u786e\u7684\u67d3\u8272\u4f53\u5bf9\u5e94<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u4efd\u67d3\u8272\u4f53\u7ea7\u7ec4\u88c5\u4e24\u4e24\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/schneebergerlab\/syri\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"100\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">100\u3000TOGA<\/h3>\n<p style=\"margin:3px 0\">\u6cbf\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u6295\u5c04\u57fa\u56e0\u5e76\u63a8\u65ad\u57fa\u56e0\u4fdd\u7559\u6216\u4e22\u5931\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7ed3\u5408\u5916\u663e\u5b50\u7ed3\u6784\u548c\u9605\u8bfb\u6846\u8bc1\u636e\uff0c\u9002\u5408\u6bd4\u8f83\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u9ad8\u8d28\u91cf\u94fe\u5f0f\u6bd4\u5bf9\u4e0e\u53c2\u8003\u6ce8\u91ca\uff0c\u7ec4\u88c5\u7f3a\u53e3\u5bb9\u6613\u6df7\u6dc6\u4e22\u5931\u5224\u65ad<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u96c6\u7fa4 CPU\u3001\u5185\u5b58\u3001\u76d8\u3002\u5927\u91cf\u7269\u79cd\u6216\u957f\u57fa\u56e0\u5e76\u884c\u6295\u5c04<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/hillerlab\/TOGA\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-06\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u5b8f\u57fa\u56e0\u7ec4\u3001\u5206\u7bb1\u4e0e\u83cc\u682a\u5206\u6790\uff08101\u2013120\uff09<\/summary>\n<p>\u82e5\u95ee\u9898\u662f\u7269\u79cd\u7ec4\u6210\uff0c\u53ef\u76f4\u63a5\u8bc4\u4f30\u5206\u7c7b\u6570\u636e\u5e93\u4e0e\u8bfb\u6bb5\u5f52\u5c5e\u3002\u82e5\u8981\u6062\u590d\u57fa\u56e0\u7ec4\u548c\u8fde\u9501\u5173\u7cfb\uff0c\u9700\u8981\u8003\u8651\u7ec4\u88c5\u3001\u5206\u7bb1\u3001\u53bb\u5197\u4f59\u4e0e\u8d28\u91cf\u8bc4\u4f30\u3002\u5171\u7ec4\u88c5\u80fd\u5408\u5e76\u8986\u76d6\uff0c\u4e5f\u53ef\u80fd\u628a\u76f8\u8fd1\u83cc\u682a\u7684\u5dee\u5f02\u6df7\u5728\u540c\u4e00\u5f20\u7ec4\u88c5\u56fe\u91cc\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"101\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">101\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/kraken2-bracken-species-abundance-report-denominators\/\">Kraken 2<\/a><\/h3>\n<p style=\"margin:3px 0\">\u628a\u5b8f\u57fa\u56e0\u7ec4\u8bfb\u6bb5\u5feb\u901f\u5f52\u5165\u5206\u7c7b\u5355\u5143\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7d22\u5f15\u53ef\u88ab\u591a\u4e2a\u6279\u6b21\u590d\u7528\uff0c\u9002\u5408\u957f\u671f\u8fd0\u884c\u76f8\u540c\u6570\u636e\u5e93\u7684\u9879\u76ee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6570\u636e\u5e93\u7ec4\u6210\u51b3\u5b9a\u53ef\u8bc6\u522b\u8303\u56f4\uff0c\u8fd1\u7f18\u79cd\u5171\u4eab\u5e8f\u5217\u4f1a\u8bef\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u6570\u636e\u5e93\u76d8\u3001\u8bfb\u76d8\u3002\u5148\u95ee\u6570\u636e\u5e93\u7248\u672c\u4e0e\u5927\u5c0f\uff0c\u518d\u95ee\u6837\u672c\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/DerrickWood\/kraken2\/wiki\/Manual\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"102\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">102\u3000Bracken<\/h3>\n<p style=\"margin:3px 0\">\u6839\u636e Kraken \u5206\u7c7b\u62a5\u544a\u91cd\u65b0\u4f30\u8ba1\u7269\u79cd\u6216\u5c5e\u4e30\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4ee5\u590d\u7528\u65e2\u6709\u62a5\u544a\uff0c\u51cf\u5c11\u91cd\u505a\u8bfb\u6bb5\u5206\u7c7b\u7684\u5f00\u9500<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u5339\u914d Kraken \u6570\u636e\u5e93\u548c\u8bfb\u957f\u5206\u5e03\uff0c\u504f\u5dee\u4f1a\u6cbf\u7528\u5230\u4e30\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u666e\u901a\u4e30\u5ea6\u91cd\u4f30\u8f83\u8f7b\u3002\u5927\u5e93\u91cd\u65b0\u6784\u5efa Bracken \u5206\u5e03\u65f6\u8017 CPU \u548c\u76d8<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/jenniferlu717\/Bracken\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"103\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">103\u3000MetaPhlAn<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7c7b\u7fa4\u7279\u5f02\u6807\u8bb0\u57fa\u56e0\u4f30\u8ba1\u7fa4\u843d\u7ec4\u6210\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u907f\u514d\u6bd4\u5bf9\u6574\u4e2a\u53c2\u8003\u57fa\u56e0\u7ec4\u5e93\uff0c\u4fbf\u4e8e\u8de8\u6837\u672c\u505a\u6807\u8bb0\u8c31<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u975e\u6807\u8bb0\u533a\u57df\u7684\u4fe1\u606f\u5229\u7528\u5c11\uff0c\u4f4e\u4e30\u5ea6\u68c0\u51fa\u53d7\u6df1\u5ea6\u548c\u6570\u636e\u5e93\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u5927\u961f\u5217\u9010\u6837\u672c\u641c\u7d22\u53ca\u6362\u6570\u636e\u5e93\u91cd\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/biobakery\/MetaPhlAn\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"104\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">104\u3000HUMAnN<\/h3>\n<p style=\"margin:3px 0\">\u6309\u7fa4\u843d\u6216\u7269\u79cd\u5f52\u5c5e\u4f30\u8ba1\u57fa\u56e0\u5bb6\u65cf\u548c\u4ee3\u8c22\u901a\u8def\u4e30\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e32\u8054\u6838\u9178\u4e0e\u7ffb\u8bd1\u641c\u7d22\uff0c\u8f93\u51fa\u517c\u987e\u7fa4\u843d\u529f\u80fd\u548c\u6765\u6e90<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5927\u91cf\u8bfb\u6bb5\u8fdb\u5165\u7ffb\u8bd1\u641c\u7d22\u65f6\u8f83\u6162\uff0c\u901a\u8def\u4e30\u5ea6\u4ecd\u53d7\u6570\u636e\u5e93\u8986\u76d6\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u672a\u5339\u914d\u8bfb\u6bb5\u591a\u3001\u961f\u5217\u5927\u65f6\u66f4\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/biobakery\/humann\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"105\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">105\u3000MEGAHIT<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u77ed\u8bfb\u957f\u5b8f\u57fa\u56e0\u7ec4\u7ec4\u88c5 contig\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u538b\u7f29\u56fe\u8868\u793a\u9002\u5408\u6df1\u6d4b\u5e8f\u7fa4\u843d\u53ca\u5927\u89c4\u6a21\u5171\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5ea6\u76f8\u4f3c\u83cc\u682a\u548c\u4f4e\u4e30\u5ea6\u57fa\u56e0\u7ec4\u4ecd\u6613\u788e\u7247\u5316<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5171\u7ec4\u88c5\u6837\u672c\u6570\u3001\u603b\u78b1\u57fa\u4e0e\u7fa4\u843d\u590d\u6742\u5ea6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/voutcn\/megahit\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"106\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">106\u3000SPAdes\uff08\u542b metaSPAdes\uff09<\/h3>\n<p style=\"margin:3px 0\">\u7ec4\u88c5\u5206\u79bb\u682a\u6216\u7528 metaSPAdes \u6a21\u5f0f\u7ec4\u88c5\u590d\u6742\u7fa4\u843d\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u591a k-mer \u6d41\u7a0b\u53ef\u5904\u7406\u4e0d\u540c\u8986\u76d6\u7279\u5f81\uff0c\u63d0\u4f9b\u7ec4\u88c5\u56fe<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u590d\u6742\u7fa4\u843d\u7684\u7ec4\u88c5\u53ef\u80fd\u51fa\u73b0\u8f83\u9ad8\u5cf0\u503c\u5185\u5b58\uff0c\u5efa\u5e93\u7c7b\u578b\u987b\u7b26\u5408\u6240\u9009\u6a21\u5f0f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5927\u5185\u5b58\u3001CPU\u3001\u4e34\u65f6\u76d8\u3002\u6309\u83cc\u682a\u6a21\u5f0f\u6216\u5b8f\u57fa\u56e0\u7ec4\u6a21\u5f0f\u5206\u522b\u4f30\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ablab\/spades\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"107\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">107\u3000MetaBAT 2<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5e8f\u5217\u7ec4\u6210\u4e0e\u8986\u76d6\u4fe1\u606f\u5c06 contig \u5206\u7bb1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u590d\u7528\u591a\u6837\u672c\u8986\u76d6\u5dee\u5f02\uff0c\u9002\u5408\u8f83\u5927\u7ec4\u88c5\u7684\u5feb\u901f\u521d\u7b5b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fd1\u7f18\u83cc\u682a\u53ca\u8f83\u77ed contig \u96be\u4ee5\u7a33\u5b9a\u5206\u5f00<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u4efd BAM \u751f\u6210\u8986\u76d6\u8868\u5e38\u5360\u66f4\u591a I\/O<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC6662567\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"108\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">108\u3000MaxBin 2<\/h3>\n<p style=\"margin:3px 0\">\u7ed3\u5408\u6807\u8bb0\u57fa\u56e0\u3001\u7ec4\u6210\u548c\u8986\u76d6\u4f30\u8ba1\u5fae\u751f\u7269\u57fa\u56e0\u7ec4\u5206\u7bb1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5229\u7528\u591a\u6837\u672c\u4e30\u5ea6\u77e9\u9635\u8f85\u52a9\u62c6\u5206\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8986\u76d6\u76f8\u8fd1\u7684\u8fd1\u7f18\u79cd\u6216\u7a00\u6709\u79cd\u5bb9\u6613\u5f62\u6210\u4e0d\u5b8c\u6574\u7bb1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5171\u7ec4\u88c5 contig \u6570\u548c\u8986\u76d6\u6837\u672c\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/26515820\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"109\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">109\u3000CONCOCT<\/h3>\n<p style=\"margin:3px 0\">\u57fa\u4e8e\u5e8f\u5217\u7ec4\u6210\u53ca\u8de8\u6837\u672c\u8986\u76d6\u505a\u65e0\u76d1\u7763\u5206\u7bb1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u591a\u6837\u672c\u8986\u76d6\u53d8\u5316\u53ef\u5e2e\u52a9\u533a\u5206\u7ec4\u6210\u76f8\u8fd1\u7684 contig<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0a\u6e38\u5207\u7247\u53ca\u56de\u5e76\u4f1a\u5f71\u54cd\u7ed3\u679c\uff0c\u5355\u6837\u672c\u8986\u76d6\u4fe1\u606f\u6709\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5207\u7247\u6570\u548c\u591a\u6837\u672c\u8986\u76d6\u77e9\u9635\u51b3\u5b9a\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/BinPro\/CONCOCT\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"110\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">110\u3000VAMB<\/h3>\n<p style=\"margin:3px 0\">\u7528\u53d8\u5206\u81ea\u7f16\u7801\u5668\u5b66\u4e60 contig \u8868\u793a\u5e76\u5206\u7bb1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6574\u5408\u591a\u6837\u672c\u4e30\u5ea6\u4e0e\u5e8f\u5217\u7ec4\u6210\uff0c\u9002\u5408\u5927\u89c4\u6a21\u6837\u672c\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u5339\u914d\u7684\u4e30\u5ea6\u77e9\u9635\uff0c\u83cc\u682a\u6df7\u5408\u4ecd\u9700\u7bb1\u8d28\u91cf\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u4e3b\u5185\u5b58\u3002\u591a\u6837\u672c\u8054\u5408\u8bad\u7ec3\u53ca\u5927\u91cf contig<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/RasmussenLab\/vamb\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"111\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">111\u3000SemiBin2<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u81ea\u76d1\u7763\u5b66\u4e60\u5bf9\u5b8f\u57fa\u56e0\u7ec4 contig \u5206\u7bb1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u9762\u5411\u77ed\u8bfb\u957f\u6216\u957f\u8bfb\u957f\u7ec4\u88c5\uff0c\u652f\u6301\u591a\u6837\u672c\u6a21\u5f0f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u3001\u6837\u672c\u5212\u5206\u548c\u8986\u76d6\u6587\u4ef6\u9700\u8981\u4e0e\u7ec4\u88c5\u4e00\u81f4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u53ef\u52a0\u901f\u3001\u5185\u5b58\u3002\u591a\u6837\u672c\u8bad\u7ec3\u548c\u8054\u5408\u5206\u7bb1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/BigDataBiology\/SemiBin\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"112\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">112\u3000DAS Tool<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u591a\u4e2a\u5206\u7bb1\u5668\u4ea7\u751f\u7684\u5019\u9009\u7bb1\u8fdb\u884c\u8bc4\u5206\u548c\u53bb\u5197\u4f59\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u590d\u7528\u5df2\u6709\u5206\u7bb1\u7ed3\u679c\uff0c\u53ef\u6574\u5408\u4e92\u8865\u7684\u5019\u9009\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6548\u679c\u53d7\u5019\u9009\u7bb1\u8d28\u91cf\u548c\u5355\u62f7\u8d1d\u57fa\u56e0\u4fe1\u606f\u9650\u5236<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u5957\u5927\u5206\u7bb1\u7ed3\u679c\u53ca\u6807\u8bb0\u57fa\u56e0\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/cmks\/DAS_Tool\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"113\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">113\u3000CheckM2<\/h3>\n<p style=\"margin:3px 0\">\u4f30\u8ba1\u5fae\u751f\u7269\u57fa\u56e0\u7ec4\u6216 MAG \u7684\u5b8c\u6574\u5ea6\u4e0e\u6c61\u67d3\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u673a\u5668\u5b66\u4e60\u7ed3\u5408\u6807\u8bb0\u548c\u529f\u80fd\u4fe1\u606f\uff0c\u4fbf\u4e8e\u6279\u91cf\u8d28\u63a7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9884\u6d4b\u503c\u6709\u7269\u79cd\u4e0e\u57fa\u56e0\u7ec4\u7279\u5f81\u4f9d\u8d56\uff0c\u8fb9\u7f18\u7bb1\u9700\u518d\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u6570\u636e\u5e93\u76d8\u3002\u6210\u5343\u4e0a\u4e07 MAG \u7684\u86cb\u767d\u529f\u80fd\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/chklovski\/CheckM2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"114\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">114\u3000GTDB-Tk<\/h3>\n<p style=\"margin:3px 0\">\u5c06\u7ec6\u83cc\u6216\u53e4\u83cc\u7ec4\u88c5\u6309 GTDB \u4f53\u7cfb\u5206\u7c7b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7efc\u5408 ANI\u3001\u6807\u8bb0\u57fa\u56e0\u548c\u53c2\u8003\u6811\uff0c\u4fbf\u4e8e\u5bf9 MAG \u7edf\u4e00\u547d\u540d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u5e93\u7248\u672c\u4f1a\u6539\u53d8\u5206\u7c7b\uff0c\u6811\u653e\u7f6e\u4e0e ANI \u547d\u4e2d\u7684\u8017\u65f6\u4e0d\u540c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5927\u5185\u5b58\u3001CPU\u3001\u5e93\u76d8\u3002\u770b\u53c2\u8003\u5e93\u7248\u672c\u3001\u6811\u6a21\u5f0f\u53ca\u8fdb\u5165\u653e\u7f6e\u7684 MAG \u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/ecogenomics.github.io\/GTDBTk\/installing\/index.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"115\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">115\u3000dRep<\/h3>\n<p style=\"margin:3px 0\">\u6309\u57fa\u56e0\u7ec4\u76f8\u4f3c\u6027\u5bf9 MAG \u6216\u5206\u79bb\u682a\u53bb\u5197\u4f59\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5148\u7c97\u5206\u518d\u7cbe\u6bd4\uff0c\u53ef\u9009\u62e9\u8d28\u91cf\u8f83\u597d\u7684\u4ee3\u8868\u7ec4\u88c5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000ANI\u3001\u5bf9\u9f50\u8986\u76d6\u548c\u8d28\u91cf\u6743\u91cd\u4f1a\u6539\u53d8\u4ee3\u8868\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u7c07\u5185\u90e8\u7cbe\u6bd4\u8f83\u5bb9\u6613\u6210\u4e3a\u74f6\u9888<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/MrOlm\/drep\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"116\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">116\u3000CoverM<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5b8f\u57fa\u56e0\u7ec4\u8bfb\u6bb5\u4f30\u8ba1 contig \u6216\u57fa\u56e0\u7ec4\u7684\u8986\u76d6\u4e0e\u4e30\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fbf\u4e8e\u628a\u540c\u4e00\u5957 MAG \u4f5c\u4e3a\u591a\u4e2a\u6837\u672c\u7684\u8986\u76d6\u53c2\u8003<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u76f8\u8fd1\u57fa\u56e0\u7ec4\u4e4b\u95f4\u8bfb\u6bb5\u591a\u91cd\u6620\u5c04\uff0c\u9608\u503c\u4f1a\u5de6\u53f3\u4e30\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u5199\u3002\u5927\u91cf\u6837\u672c\u56de\u8d34\u540c\u4e00 MAG \u96c6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/wwood\/CoverM\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"117\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">117\u3000anvi\u2019o<\/h3>\n<p style=\"margin:3px 0\">\u4ea4\u4e92\u5f0f\u6574\u5408\u7ec4\u88c5\u3001\u8986\u76d6\u3001\u57fa\u56e0\u6ce8\u91ca\u4e0e\u6cdb\u57fa\u56e0\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5c06\u81ea\u52a8\u5206\u7bb1\u548c\u4eba\u5de5\u7cbe\u4fee\u653e\u5728\u540c\u4e00\u5957\u7ed3\u679c\u4e2d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5efa\u5e93\u4e0e\u73af\u5883\u4f9d\u8d56\u8f83\u591a\uff0c\u5927\u578b\u4ea4\u4e92\u7ed3\u679c\u9700\u8981\u7b5b\u9009\u89c6\u56fe<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u6570\u636e\u5e93 I\/O\u3002\u591a\u6837\u672c profiling \u548c\u6cdb\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/anvio.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"118\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">118\u3000metaWRAP<\/h3>\n<p style=\"margin:3px 0\">\u7f16\u6392\u5b8f\u57fa\u56e0\u7ec4\u8d28\u63a7\u3001\u7ec4\u88c5\u3001\u5206\u7bb1\u4e0e\u7cbe\u4fee\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7528\u7edf\u4e00\u5165\u53e3\u590d\u7528\u591a\u4e2a\u5206\u7bb1\u5668\u548c\u8bc4\u4f30\u6b65\u9aa4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u65e7\u4f9d\u8d56\u548c\u53c2\u8003\u6570\u636e\u5e93\u7684\u590d\u73b0\u6210\u672c\u9ad8\uff0c\u5b9c\u6309\u6a21\u5757\u9501\u5b9a\u73af\u5883<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5cf0\u503c\u53d6\u51b3\u4e8e\u7ec4\u88c5\u548c\u5206\u7bb1\u6a21\u5757<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bxlab\/metaWRAP\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"119\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">119\u3000Kaiju<\/h3>\n<p style=\"margin:3px 0\">\u5728\u86cb\u767d\u5c42\u9762\u5bf9\u5b8f\u57fa\u56e0\u7ec4\u8bfb\u6bb5\u505a\u5206\u7c7b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7ffb\u8bd1\u641c\u7d22\u6709\u52a9\u4e8e\u53d1\u73b0\u6838\u9178\u5dee\u5f02\u8f83\u5927\u7684\u540c\u6e90\u5e8f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fd1\u7f18\u79cd\u86cb\u767d\u4fdd\u5b88\u4f1a\u964d\u4f4e\u5206\u7c7b\u5206\u8fa8\u7387\uff0c\u7ed3\u679c\u968f\u53c2\u8003\u5e93\u53d8\u5316<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u86cb\u767d\u5e93\u76d8\u3002\u6d77\u91cf\u8bfb\u6bb5\u4e0e\u5927\u53c2\u8003\u5e93<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bioinformatics-centre\/kaiju\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"120\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">120\u3000inStrain<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u5b8f\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u91cf\u5316\u5fae\u591a\u6837\u6027\u5e76\u6bd4\u8f83\u83cc\u682a\u7fa4\u4f53\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7ed3\u5408\u8986\u76d6\u3001\u53d8\u5f02\u548c\u8fde\u9501\u4fe1\u606f\uff0c\u4fbf\u4e8e\u7814\u7a76\u83cc\u682a\u5171\u4eab<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8986\u76d6\u4e0d\u8db3\u6216\u53c2\u8003\u4e0e\u771f\u5b9e\u83cc\u682a\u5dee\u5f02\u5927\u65f6\u7ed3\u679c\u4e0d\u7a33<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001BAM \u8bfb\u5199\u3002\u6df1\u5ea6\u961f\u5217\u548c\u6837\u672c\u95f4\u6210\u5bf9\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/instrain.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-07\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u5fae\u751f\u7269\u751f\u6001\u3001\u75c5\u539f\u4f53\u4e0e\u529f\u80fd\u57fa\u56e0\uff08121\u2013140\uff09<\/summary>\n<p>\u5148\u5b9a\u4e49\u751f\u6001\u95ee\u9898\u7684\u8f93\u5165\u548c\u5206\u6bcd\u3002\u6269\u589e\u5b50\u7279\u5f81\u8868\u3001\u57fa\u56e0\u5bb6\u65cf\u4e30\u5ea6\u548c\u5bbf\u4e3b\u53bb\u9664\u540e\u7684\u75c5\u539f\u8bfb\u6bb5\u6709\u4e0d\u540c\u7684\u8bef\u5dee\u6765\u6e90\u3002\u6bd4\u8f83\u76f8\u5bf9\u4e30\u5ea6\u65f6\u540c\u65f6\u8bb0\u5f55\u672a\u5206\u7c7b\u90e8\u5206\u3001\u53c2\u8003\u5e93\u7248\u672c\u53ca\u6d4b\u5e8f\u6df1\u5ea6\uff0c\u4f4e\u4e30\u5ea6\u4fe1\u53f7\u5e94\u56de\u67e5\u539f\u59cb\u8bc1\u636e\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"121\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">121\u3000QIIME 2<\/h3>\n<p style=\"margin:3px 0\">\u7528\u53ef\u8ffd\u6eaf\u7684\u63d2\u4ef6\u6d41\u7a0b\u5904\u7406\u6269\u589e\u5b50\u7b49\u5fae\u751f\u7269\u7ec4\u6570\u636e\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fdd\u7559\u5206\u6790\u6765\u6e90\uff0c\u4fbf\u4e8e\u5728\u56e2\u961f\u4e2d\u590d\u67e5\u8868\u683c\u3001\u6811\u548c\u591a\u6837\u6027\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5177\u4f53\u7b97\u6cd5\u548c\u8d44\u6e90\u6d88\u8017\u53d6\u51b3\u4e8e\u63d2\u4ef6\uff0c\u5206\u7c7b\u5668\u987b\u5339\u914d\u6269\u589e\u533a\u57df<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u961f\u5217\u53bb\u566a\u6216\u8bad\u7ec3\u5206\u7c7b\u5668\u65f6\u624d\u660e\u663e\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/qiime2.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"122\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">122\u3000DADA2<\/h3>\n<p style=\"margin:3px 0\">\u6309\u6d4b\u5e8f\u8bef\u5dee\u6a21\u578b\u63a8\u65ad\u6269\u589e\u5b50\u5e8f\u5217\u53d8\u4f53\uff08ASV\uff09\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5355\u78b1\u57fa\u5206\u8fa8\u7387\uff0c\u80fd\u76f4\u63a5\u6784\u5efa ASV \u8868\u5e76\u53bb\u5d4c\u5408\u4f53<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u622a\u65ad\u957f\u5ea6\u548c\u8bfb\u6bb5\u91cd\u53e0\u4e0d\u8db3\u4f1a\u5f71\u54cd\u5408\u5e76\uff0c\u6df7\u5408\u6279\u6b21\u987b\u68c0\u67e5\u8bef\u5dee\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6df1\u6d4b\u5e8f\u3001\u5168\u6c60\u5316\u548c\u5927\u91cf\u72ec\u7279\u5e8f\u5217\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/benjjneb.github.io\/dada2\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"123\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">123\u3000mothur<\/h3>\n<p style=\"margin:3px 0\">\u7528\u547d\u4ee4\u5316\u6d41\u7a0b\u5904\u7406\u6269\u589e\u5b50\u3001OTU \u548c\u591a\u6837\u6027\u7ed3\u679c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6559\u7a0b\u4e0e\u6807\u51c6\u6d41\u7a0b\u6210\u719f\uff0c\u9002\u5408\u590d\u73b0\u65e2\u6709 16S \u9879\u76ee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u805a\u7c7b\u7b56\u7565\u53ca\u53c2\u8003\u6bd4\u5bf9\u4f1a\u6539\u53d8 OTU \u5b9a\u4e49\uff0c\u5168\u8ddd\u79bb\u8ba1\u7b97\u53ef\u5f88\u91cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u72ec\u7279\u5e8f\u5217\u7684\u8ddd\u79bb\u77e9\u9635\u6216\u805a\u7c7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/mothur.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"124\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">124\u3000VSEARCH<\/h3>\n<p style=\"margin:3px 0\">\u6838\u9178\u5e8f\u5217\u53bb\u5197\u4f59\u3001\u805a\u7c7b\u3001\u641c\u7d22\u53ca\u53bb\u5d4c\u5408\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u7528\u540c\u4e00\u547d\u4ee4\u884c\u5de5\u5177\u7ec4\u5408\u591a\u79cd\u6269\u589e\u5b50\u5904\u7406\u6b65\u9aa4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u57fa\u4e8e\u76f8\u4f3c\u6027\u9608\u503c\u7684\u805a\u7c7b\u4f1a\u53d7\u9608\u503c\u548c\u8f93\u5165\u987a\u5e8f\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u72ec\u7279\u5e8f\u5217\u7684\u5168\u5e93\u6bd4\u5bf9\u548c\u805a\u7c7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/torognes\/vsearch\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"125\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">125\u3000PICRUSt2<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6807\u8bb0\u57fa\u56e0\u5e8f\u5217\u63a8\u6d4b\u5fae\u751f\u7269\u7fa4\u843d\u529f\u80fd\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6ca1\u6709 shotgun \u6570\u636e\u65f6\u4e5f\u80fd\u5f62\u6210\u53ef\u68c0\u9a8c\u7684\u529f\u80fd\u5047\u8bbe<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9884\u6d4b\u4f9d\u8d56\u4e0e\u53c2\u8003\u57fa\u56e0\u7ec4\u7684\u4eb2\u7f18\u5173\u7cfb\uff0c\u4e0d\u80fd\u76f4\u63a5\u6d4b\u51fa\u6837\u672c\u57fa\u56e0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u578b ASV \u96c6\u7684\u7cfb\u7edf\u6811\u653e\u7f6e\u8f83\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/picrust\/picrust2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"126\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">126\u3000sourmash<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5e8f\u5217\u8349\u56fe\u641c\u7d22\u3001\u6bd4\u8f83\u548c\u5206\u89e3\u5fae\u751f\u7269\u6837\u672c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8349\u56fe\u4fbf\u4e8e\u9ad8\u901a\u91cf\u521d\u7b5b\u548c\u53c2\u8003\u5e93\u590d\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7a00\u758f\u91c7\u6837\u727a\u7272\u90e8\u5206\u4f4e\u4e30\u5ea6\u4fe1\u606f\uff0ck \u4e0e\u7f29\u653e\u53c2\u6570\u9700\u5339\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u7d22\u5f15\u76d8\u3002\u8d85\u5927\u8349\u56fe\u5e93\u53ca\u53cd\u590d\u641c\u7d22\uff0c\u5355\u6b21\u5c0f\u6bd4\u8f83\u8f83\u8f7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/sourmash.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"127\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">127\u3000skani<\/h3>\n<p style=\"margin:3px 0\">\u5feb\u901f\u4f30\u7b97\u539f\u6838\u57fa\u56e0\u7ec4\u95f4\u7684 ANI \u548c\u5bf9\u9f50\u6bd4\u4f8b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u5148\u5bf9\u5927\u6279 MAG \u505a\u76f8\u4f3c\u6027\u7b5b\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u76f8\u4f3c\u6216\u91cd\u53e0\u4e0d\u8db3\u65f6\u5f97\u5206\u89e3\u91ca\u53d7\u9650\uff0c\u4e0d\u80fd\u66ff\u4ee3\u9010\u78b1\u57fa\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u89c4\u6a21\u5168\u5bf9\u5168\u6bd4\u8f83\u6bd4\u5355\u5bf9\u66f4\u6709\u4ef7\u503c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bluenote-1577\/skani\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"128\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">128\u3000Prokka<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u539f\u6838\u7ec4\u88c5\u5feb\u901f\u751f\u6210\u57fa\u56e0\u4e0e\u529f\u80fd\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f93\u5165\u8f93\u51fa\u7b80\u6d01\uff0c\u9002\u5408\u6cbf\u7528\u5df2\u6709\u7ec6\u83cc\u5206\u79bb\u682a\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u53c2\u8003\u5e93\u8986\u76d6\u548c\u57fa\u56e0\u547d\u540d\u89c4\u5219\uff0c\u8de8\u9879\u76ee\u7248\u672c\u987b\u9501\u5b9a<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u5355\u4e2a\u83cc\u682a\u5e38\u8f83\u8f7b\uff0c\u6301\u7eed\u6279\u91cf\u63d0\u4ea4\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/tseemann\/prokka\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"129\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">129\u3000Bakta<\/h3>\n<p style=\"margin:3px 0\">\u7528\u6807\u51c6\u5316\u6570\u636e\u5e93\u5bf9\u7ec6\u83cc\u7ec4\u88c5\u8fdb\u884c\u7ed3\u6784\u53ca\u529f\u80fd\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7a33\u5b9a\u6807\u8bc6\u7b26\u548c\u7edf\u4e00\u8f93\u51fa\u65b9\u4fbf\u6bd4\u8f83\u591a\u682a\u57fa\u56e0\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6570\u636e\u5e93\u9700\u8981\u672c\u5730\u7a7a\u95f4\u5e76\u4fdd\u6301\u53ef\u8ffd\u8e2a\u7248\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u6570\u636e\u5e93\u76d8\u3002\u6210\u767e\u4e0a\u5343\u83cc\u682a\u66f4\u65b0\u6ce8\u91ca\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/oschwengers\/bakta\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"130\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">130\u3000Panaroo<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u57fa\u56e0\u56fe\u6784\u5efa\u7ec6\u83cc\u6cdb\u57fa\u56e0\u7ec4\u5e76\u6821\u6b63\u90e8\u5206\u6ce8\u91ca\u8bef\u5dee\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6539\u5584\u7ec4\u88c5\u788e\u7247\u5316\u5e26\u6765\u7684\u865a\u5047\u57fa\u56e0\u5bb6\u65cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u57fa\u56e0\u5bb6\u65cf\u4e0e\u5b58\u5728\u7f3a\u5931\u77e9\u9635\u53d7\u6ce8\u91ca\u4e00\u81f4\u6027\u548c\u6e05\u7406\u6a21\u5f0f\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u89c4\u6a21\u83cc\u682a\u548c\u9644\u5c5e\u57fa\u56e0\u5bb6\u65cf\u589e\u591a\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/gtonkinhill\/panaroo\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"131\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">131\u3000CheckV<\/h3>\n<p style=\"margin:3px 0\">\u8bc4\u4f30\u75c5\u6bd2\u7ec4\u88c5\u5b8c\u6574\u6027\u5e76\u8bc6\u522b\u53ef\u80fd\u7684\u5bbf\u4e3b\u6c61\u67d3\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e3a\u75c5\u6bd2 contig \u63d0\u4f9b\u76f8\u5bf9\u7edf\u4e00\u7684\u8d28\u63a7\u5c3a\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u65b0\u9896\u75c5\u6bd2\u6216\u53c2\u8003\u4e0d\u8db3\u65f6\u53ef\u51fa\u73b0\u4f4e\u7f6e\u4fe1\u5ea6\u4e43\u81f3\u65e0\u6cd5\u4f30\u8ba1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u6d77\u91cf\u5019\u9009\u75c5\u6bd2 contig \u6279\u91cf\u7b5b\u67e5<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.nature.com\/articles\/s41587-020-00774-7\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"132\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">132\u3000Snippy<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u7ec6\u83cc\u5206\u79bb\u682a\u77ed\u8bfb\u957f\u8c03\u7528\u53d8\u5f02\u5e76\u751f\u6210\u6838\u5fc3\u4f4d\u70b9\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6d41\u7a0b\u56fa\u5b9a\uff0c\u4fbf\u4e8e\u4f20\u64ad\u7814\u7a76\u4e2d\u7edf\u4e00\u5904\u7406\u591a\u4e2a\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fd1\u7f18\u53c2\u8003\u548c\u8db3\u591f\u8986\u76d6\u5f88\u91cd\u8981\uff0c\u5dee\u5f02\u8fc7\u5927\u7684\u6837\u672c\u6838\u5fc3\u533a\u4f1a\u7f29\u6c34<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u76d8\u3002\u6570\u767e\u81f3\u6570\u5343\u5206\u79bb\u682a\u6309\u6837\u672c\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/tseemann\/snippy\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"133\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">133\u3000Gubbins<\/h3>\n<p style=\"margin:3px 0\">\u5728\u7ec6\u83cc\u6838\u5fc3\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u4e2d\u8bc6\u522b\u53ef\u80fd\u7684\u91cd\u7ec4\u7247\u6bb5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fbf\u4e8e\u7814\u7a76\u91cd\u7ec4\u5bf9\u5206\u652f\u957f\u5ea6\u548c\u6811\u62d3\u6251\u7684\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u5165\u6bd4\u5bf9\u8bef\u5dee\u6216\u6837\u672c\u5dee\u5f02\u8fc7\u5927\u90fd\u4f1a\u5e72\u6270\u91cd\u7ec4\u8bc6\u522b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u89c4\u6a21\u6838\u5fc3\u6bd4\u5bf9\u4e0a\u7684\u8fed\u4ee3\u5efa\u6811<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/nickjcroucher\/gubbins\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"134\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">134\u3000ClonalFrameML<\/h3>\n<p style=\"margin:3px 0\">\u57fa\u4e8e\u6811\u548c\u5168\u57fa\u56e0\u7ec4\u6bd4\u5bf9\u63a8\u65ad\u7ec6\u83cc\u91cd\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4f30\u8ba1\u91cd\u7ec4\u4e0e\u70b9\u7a81\u53d8\u5bf9\u8fdb\u5316\u7684\u76f8\u5bf9\u8d21\u732e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u8f93\u5165\u6811\u3001\u5e8f\u5217\u6bd4\u5bf9\u548c\u91cd\u7ec4\u6a21\u578b\u5047\u8bbe<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u83cc\u682a\u3001\u4f4d\u70b9\u548c\u591a\u7ec4\u53c2\u6570\u62df\u5408\u89c4\u6a21\u51b3\u5b9a\u65f6\u957f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/xavierdidelot\/ClonalFrameML\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"135\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">135\u3000Bactopia<\/h3>\n<p style=\"margin:3px 0\">\u7f16\u6392\u7ec6\u83cc\u5206\u79bb\u682a\u8d28\u63a7\u3001\u7ec4\u88c5\u548c\u53ef\u9009\u4e0b\u6e38\u6d41\u7a0b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u6279\u6b21\u53ef\u5e76\u884c\u590d\u7528\u6d41\u7a0b\u53ca\u6570\u636e\u5e93<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5b89\u88c5\u591a\u4e2a\u53ef\u9009\u6a21\u5757\u4f1a\u589e\u52a0\u955c\u50cf\u4e0e\u53c2\u8003\u5e93\u7ef4\u62a4\u5de5\u4f5c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5171\u4eab\u76d8\u3002\u6301\u7eed\u9001\u6837\u548c\u591a\u4e2a\u5206\u6790\u6a21\u5757\u53e0\u52a0<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bactopia.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"136\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">136\u3000AMRFinderPlus<\/h3>\n<p style=\"margin:3px 0\">\u5728\u7ec6\u83cc\u7ec4\u88c5\u6216\u86cb\u767d\u5e8f\u5217\u4e2d\u5bfb\u627e\u8010\u836f\u57fa\u56e0\u53ca\u5df2\u77e5\u7a81\u53d8\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7531 NCBI \u7ef4\u62a4\u89c4\u5219\u5e93\uff0c\u53ef\u8ffd\u6eaf\u547d\u4e2d\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u68c0\u6d4b\u8303\u56f4\u4f9d\u8d56\u6570\u636e\u5e93\u4e0e\u7269\u79cd\uff0c\u57fa\u56e0\u547d\u4e2d\u4e0d\u80fd\u76f4\u63a5\u66ff\u4ee3\u8868\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u6570\u636e\u5e93\u76d8\u3002\u5355\u682a\u8f83\u8f7b\uff0c\u76d1\u6d4b\u961f\u5217\u9760\u6279\u91cf\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ncbi\/amr\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"137\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">137\u3000RGI<\/h3>\n<p style=\"margin:3px 0\">\u6309 CARD \u6a21\u578b\u9274\u5b9a\u5019\u9009\u8010\u836f\u57fa\u56e0\u53ca\u76f8\u5173\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u533a\u5206\u4e0d\u540c\u8bc1\u636e\u7b49\u7ea7\uff0c\u65b9\u4fbf\u8ffd\u6eaf\u8010\u836f\u673a\u5236<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5bbd\u677e\u9608\u503c\u4f1a\u589e\u52a0\u5f85\u590d\u6838\u7ed3\u679c\uff0c\u57fa\u56e0\u578b\u4e0e\u836f\u654f\u8868\u578b\u4ecd\u6709\u8ddd\u79bb<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5e93\u76d8\u3002\u5b8f\u57fa\u56e0\u7ec4\u8bfb\u6bb5\u6216\u6d77\u91cf\u7ec4\u88c5\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/arpcard\/rgi\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"138\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">138\u3000geNomad<\/h3>\n<p style=\"margin:3px 0\">\u5728\u5b8f\u57fa\u56e0\u7ec4\u5e8f\u5217\u4e2d\u8bc6\u522b\u75c5\u6bd2\u548c\u8d28\u7c92\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5c06\u6807\u8bb0\u4e0e\u5e8f\u5217\u5206\u7c7b\u7ed3\u5408\uff0c\u80fd\u5904\u7406\u5927\u6279 contig<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u77ed\u7247\u6bb5\u548c\u672a\u5145\u5206\u8868\u5f81\u7684\u7c7b\u7fa4\u53ef\u80fd\u96be\u4ee5\u53ef\u9760\u533a\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u5927\u578b\u5171\u7ec4\u88c5\u548c\u8de8\u9879\u76ee\u91cd\u7b5b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/portal.nersc.gov\/genomad\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"139\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">139\u3000VirSorter2<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u57fa\u56e0\u7ec4\u6216\u5b8f\u57fa\u56e0\u7ec4\u7ec4\u88c5\u4e2d\u53d1\u6398\u5019\u9009\u75c5\u6bd2\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6309\u75c5\u6bd2\u7ec4\u522b\u7b5b\u67e5\uff0c\u4fbf\u4e8e\u4e0e\u8d28\u91cf\u8bc4\u4f30\u6d41\u7a0b\u8854\u63a5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u77ed contig \u548c\u5f02\u5e38\u5bbf\u4e3b\u7247\u6bb5\u53ef\u80fd\u5bfc\u81f4\u6f0f\u68c0\u6216\u5047\u9633\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u5927\u91cf contig \u7684\u57fa\u56e0\u4e0e HMM \u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/jiarong\/VirSorter2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"140\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">140\u3000DRAM<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5fae\u751f\u7269\u57fa\u56e0\u7ec4\u6216 MAG \u505a\u529f\u80fd\u6ce8\u91ca\u53ca\u4ee3\u8c22\u6c47\u603b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u591a\u5e93\u547d\u4e2d\u6574\u7406\u6210\u53ef\u8bfb\u7684\u4ee3\u8c22\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u542f\u7528\u7684\u6570\u636e\u5e93\u548c\u6388\u6743\u6570\u636e\u8303\u56f4\u5f71\u54cd\u8986\u76d6\u4e0e\u53ef\u590d\u73b0\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u591a\u4e2a\u5927\u578b\u86cb\u767d\u5e93\u4e0e\u6210\u6279 MAG<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/BortonWrightonLabs\/DRAM\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-08\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u8f6c\u5f55\u7ec4\u5b9a\u91cf\u3001\u526a\u63a5\u4e0e\u8868\u8fbe\u7f51\u7edc\uff08141\u2013160\uff09<\/summary>\n<p>\u9700\u8981\u57fa\u56e0\u8868\u8fbe\u3001\u8f6c\u5f55\u672c\u6bd4\u4f8b\u6216\u526a\u63a5\u4e8b\u4ef6\uff0c\u51b3\u5b9a\u4e86\u53ef\u7528\u7684\u5b9a\u91cf\u5355\u4f4d\u3002\u5efa\u7acb\u53c2\u8003\u65f6\u6838\u5bf9\u6ce8\u91ca\u7248\u672c\uff0c\u68c0\u67e5\u53cc\u7aef\u65b9\u5411\u548c\u6587\u5e93\u94fe\u7279\u5f02\u6027\u3002\u5dee\u5f02\u6a21\u578b\u4e2d\u4fdd\u7559\u6279\u6b21\u548c\u751f\u7269\u5b66\u91cd\u590d\uff0c\u6c47\u603b\u57fa\u56e0\u540e\u518d\u89e3\u91ca\u4e9a\u578b\u53d8\u5316\u8981\u683c\u5916\u8c28\u614e\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"141\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">141\u3000HISAT2<\/h3>\n<p style=\"margin:3px 0\">\u5c06 RNA \u77ed\u8bfb\u957f\u526a\u63a5\u6bd4\u5bf9\u81f3\u57fa\u56e0\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5c42\u7ea7\u7d22\u5f15\u4fbf\u4e8e\u63a7\u5236\u5185\u5b58\uff0c\u53ef\u63a5\u5e38\u89c1\u8f6c\u5f55\u672c\u7ec4\u88c5\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u526a\u63a5\u4f4d\u70b9\u8bbe\u7f6e\u3001\u94fe\u7279\u5f02\u6027\u53ca\u6ce8\u91ca\u7248\u672c\u4f1a\u5f71\u54cd\u65b0\u63a5\u5934<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u5199\u3002\u5927\u578b RNA \u961f\u5217\u6309\u6587\u5e93\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/DaehwanKimLab\/hisat2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"142\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">142\u3000Salmon<\/h3>\n<p style=\"margin:3px 0\">\u4ece RNA \u6d4b\u5e8f\u8bfb\u6bb5\u4f30\u8ba1\u8f6c\u5f55\u672c\u4e30\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u65e0\u9700\u8f93\u51fa\u5168\u57fa\u56e0\u7ec4\u6392\u5e8f BAM \u5373\u53ef\u6279\u91cf\u5b9a\u91cf\uff0c\u53ef\u6821\u6b63\u591a\u79cd\u504f\u501a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f6c\u5f55\u672c\u96c6\u5408\u548c decoy \u9009\u62e9\u5f71\u54cd\u76f8\u8fd1\u5f02\u6784\u4f53\u7684\u4e30\u5ea6\u5206\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u7d22\u5f15\u5185\u5b58\u3002\u6570\u767e\u6587\u5e93\u6216\u53cd\u590d\u66f4\u6362\u53c2\u8003\u8f6c\u5f55\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/salmon.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"143\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">143\u3000kallisto<\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528\u4f2a\u6bd4\u5bf9\u5feb\u901f\u91cf\u5316\u5df2\u77e5\u8f6c\u5f55\u672c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u5927\u6279\u6837\u672c\u5feb\u901f\u51fa\u8868\u8fbe\u91cf\uff0c\u53ef\u7528 bootstrap \u4f30\u8ba1\u4e0d\u786e\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u53c2\u8003\u8f6c\u5f55\u7ec4\uff0c\u4e0d\u80fd\u72ec\u7acb\u91cd\u5efa\u65b0\u7684\u5b8c\u6574\u8f6c\u5f55\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u6587\u5e93\u53ca\u591a\u6b21 bootstrap \u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/pachterlab\/kallisto\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"144\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">144\u3000RSEM<\/h3>\n<p style=\"margin:3px 0\">\u7528\u6982\u7387\u6a21\u578b\u4f30\u8ba1\u57fa\u56e0\u548c\u5f02\u6784\u4f53\u8868\u8fbe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u663e\u5f0f\u5904\u7406\u591a\u91cd\u6bd4\u5bf9\u8bfb\u6bb5\u7684\u5206\u914d\uff0c\u53ef\u8f93\u51fa\u4f30\u8ba1\u4e0d\u786e\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0a\u6e38\u6bd4\u5bf9\u548c\u6982\u7387\u63a8\u65ad\u589e\u52a0\u8017\u65f6\uff0c\u76f8\u4f3c\u5f02\u6784\u4f53\u4ecd\u96be\u533a\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u6df1\u6d4b\u5e8f\u6216\u591a\u6837\u672c\u5168\u91cf\u5b9a\u91cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/deweylab\/RSEM\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"145\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">145\u3000Subread\uff08\u542b featureCounts\uff09<\/h3>\n<p style=\"margin:3px 0\">\u6bd4\u5bf9\u8bfb\u6bb5\u6216\u6309\u6ce8\u91ca\u6c47\u603b\u57fa\u56e0\u4e0e\u5916\u663e\u5b50\u8ba1\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000featureCounts \u53ef\u76f4\u63a5\u6279\u91cf\u8bfb\u53d6 BAM\uff0c\u4fbf\u4e8e\u6784\u5efa\u8ba1\u6570\u77e9\u9635<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u94fe\u7279\u5f02\u6027\u3001\u591a\u91cd\u6bd4\u5bf9\u548c\u91cd\u53e0\u7279\u5f81\u7684\u89c4\u5219\u4f1a\u6539\u53d8\u8ba1\u6570<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000BAM \u8bfb\u76d8\u3001CPU\u3002\u51e0\u767e\u4e2a\u6bd4\u5bf9\u6587\u4ef6\u5171\u7528\u78c1\u76d8\u65f6\u660e\u663e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ShiLab-Bioinformatics\/subread\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"146\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">146\u3000StringTie<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u526a\u63a5\u6bd4\u5bf9\u7ec4\u88c5\u5e76\u91cf\u5316\u8f6c\u5f55\u672c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7528\u5df2\u6709\u6ce8\u91ca\u5f15\u5bfc\uff0c\u4e5f\u53ef\u751f\u6210\u5019\u9009\u65b0\u8f6c\u5f55\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8868\u8fbe\u548c\u590d\u6742\u526a\u63a5\u533a\u57df\u6613\u4ea7\u751f\u788e\u7247\uff0c\u8de8\u6837\u672c\u5408\u5e76\u9700\u8fc7\u6ee4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u6587\u5e93\u3001\u8de8\u6837\u672c\u8f6c\u5f55\u672c\u5408\u5e76<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/gpertea\/stringtie\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"147\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">147\u3000Trinity<\/h3>\n<p style=\"margin:3px 0\">\u5728\u7f3a\u5c11\u53c2\u8003\u57fa\u56e0\u7ec4\u65f6\u4ece\u5934\u7ec4\u88c5\u77ed\u8bfb\u957f\u8f6c\u5f55\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u975e\u6a21\u5f0f\u7269\u79cd\u53d1\u73b0\u5019\u9009\u8f6c\u5f55\u672c\uff0c\u540e\u7eed\u53ef\u9884\u6d4b\u5f00\u653e\u9605\u8bfb\u6846<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u8868\u8fbe\u5197\u4f59\u3001\u76f8\u4f3c\u57fa\u56e0\u4e0e\u5f02\u6784\u4f53\u4f1a\u4f7f\u7ec4\u88c5\u96be\u4ee5\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5927\u5185\u5b58\u3001\u591a\u6838 CPU\u3001\u4e34\u65f6\u76d8\u3002\u591a\u7ec4\u7ec7\u5408\u5e76\u53ca\u6df1\u6d4b\u5e8f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/trinityrnaseq\/trinityrnaseq\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"148\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">148\u3000TransDecoder<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u8f6c\u5f55\u672c\u5e8f\u5217\u4e2d\u9884\u6d4b\u5019\u9009\u7f16\u7801\u533a\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u52a0\u5165\u540c\u6e90\u6216\u7ed3\u6784\u57df\u8bc1\u636e\u7b5b\u9009 ORF\uff0c\u9002\u5408\u7ec4\u88c5\u540e\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u77ed ORF\u3001\u788e\u7247\u8f6c\u5f55\u672c\u548c\u975e\u6807\u51c6\u9057\u4f20\u5bc6\u7801\u9700\u7279\u522b\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5927\u89c4\u6a21\u8f6c\u5f55\u672c\u7684\u5916\u90e8\u540c\u6e90\u641c\u7d22\u901a\u5e38\u6700\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/TransDecoder\/TransDecoder\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"149\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">149\u3000FLAIR<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u957f\u8bfb\u957f RNA \u6bd4\u5bf9\u505a\u526a\u63a5\u7ea0\u6b63\u3001\u5f02\u6784\u4f53\u5f52\u5e76\u548c\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7528\u6ce8\u91ca\u6216\u77ed\u8bfb\u957f\u63a5\u5934\u589e\u5f3a\u5f02\u6784\u4f53\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u622a\u77ed\u8bfb\u6bb5\u548c\u4f4e\u8986\u76d6\u53ef\u5bfc\u81f4\u9519\u8bef\u5408\u5e76\u6216\u9057\u6f0f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u591a\u6761\u4ef6\u5168\u957f\u8f6c\u5f55\u7ec4\u8054\u5408\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/BrooksLabUCSC\/flair\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"150\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">150\u3000IsoQuant<\/h3>\n<p style=\"margin:3px 0\">\u7528\u957f\u8bfb\u957f RNA \u6d4b\u5e8f\u7ec4\u88c5\u5e76\u5b9a\u91cf\u5f02\u6784\u4f53\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u65f6\u8986\u76d6\u5df2\u6ce8\u91ca\u548c\u5019\u9009\u65b0\u5f02\u6784\u4f53\uff0c\u9002\u5408\u975e\u6a21\u5f0f\u8f6c\u5f55\u672c\u7814\u7a76<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u679c\u4f9d\u8d56\u6bd4\u5bf9\u8d28\u91cf\u3001\u6ce8\u91ca\u5b8c\u6574\u6027\u53ca\u672b\u7aef\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u578b\u961f\u5217\u6309\u6837\u672c\u6216\u57fa\u56e0\u7ec4\u5206\u533a<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ablab\/IsoQuant\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"151\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">151\u3000SQANTI3<\/h3>\n<p style=\"margin:3px 0\">\u7ed9\u957f\u8bfb\u957f\u5f02\u6784\u4f53\u5206\u7c7b\u5e76\u68c0\u67e5\u7ed3\u6784\u4f2a\u5f71\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u540c\u65f6\u67e5\u770b\u526a\u63a5\u3001\u8f6c\u5f55\u8d77\u6b62\u53ca\u652f\u6301\u8bc1\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8d28\u91cf\u7c7b\u522b\u4e0e\u8fc7\u6ee4\u89c4\u5219\u4f9d\u8d56\u53c2\u8003\u548c\u8f85\u52a9\u6570\u636e\u8d28\u91cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u53c2\u8003\u76d8\u3002\u5168\u957f\u8f6c\u5f55\u7ec4\u76ee\u5f55\u53cd\u590d\u8d28\u63a7<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ConesaLab\/SQANTI3\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"152\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">152\u3000Iso-Seq\uff08isoseq\uff09<\/h3>\n<p style=\"margin:3px 0\">\u805a\u7c7b\u548c\u6574\u7406 PacBio \u5168\u957f\u8f6c\u5f55\u672c\u8bfb\u6bb5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e0e PacBio \u5168\u957f\u6d41\u7a0b\u8854\u63a5\uff0c\u4fbf\u4e8e\u5f97\u5230\u4e00\u81f4\u5f02\u6784\u4f53\u5e8f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000RNA \u5b8c\u6574\u5ea6\u548c\u8bfb\u6bb5\u8986\u76d6\u9650\u5236\u7f55\u89c1\u53ca\u8d85\u957f\u8f6c\u5f55\u672c\u89e3\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u78c1\u76d8\u3002\u6279\u91cf\u5168\u957f\u6587\u5e93\u805a\u7c7b\u3001\u6bd4\u5bf9\u4e0e\u5f52\u5e76<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/isoseq.how\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"153\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">153\u3000rMATS-turbo<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6709\u91cd\u590d\u7684 RNA-seq \u68c0\u6d4b\u5dee\u5f02\u526a\u63a5\u4e8b\u4ef6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6309\u4e8b\u4ef6\u7c7b\u578b\u8f93\u51fa\u53d8\u5316\u548c\u7edf\u8ba1\u91cf\uff0c\u4fbf\u4e8e\u4e0b\u6e38\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6ce8\u91ca\u3001\u8bfb\u957f\u53ca\u6bd4\u5bf9\u8d28\u91cf\u5f71\u54cd\u4e8b\u4ef6\u652f\u6301\uff0c\u9700\u5339\u914d\u5b9e\u9a8c\u5206\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001BAM \u8bfb\u5199\u3002\u5927\u961f\u5217\u5168\u91cf\u626b\u63cf\u4e0e\u91cd\u590d\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Xinglab\/rmats-turbo\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"154\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">154\u3000MAJIQ<\/h3>\n<p style=\"margin:3px 0\">\u4ece RNA \u6bd4\u5bf9\u6784\u5efa\u5c40\u90e8\u526a\u63a5\u53d8\u5f02\u5e76\u6bd4\u8f83\u6761\u4ef6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8868\u8fbe\u6bd4\u7b80\u5355\u5916\u663e\u5b50\u8df3\u8dc3\u66f4\u590d\u6742\u7684\u5c40\u90e8\u4e8b\u4ef6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8986\u76d6\u63a5\u5934\u8bc1\u636e\u4e0d\u8db3\uff0c\u8de8\u7ec4\u5206\u6790\u9700\u7edf\u4e00\u56fe\u548c\u8fc7\u6ee4\u53e3\u5f84<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u6837\u672c\u526a\u63a5\u56fe\u6784\u5efa\u4e0e\u591a\u7ec4\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/majiq.biociphers.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"155\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">155\u3000LeafCutter<\/h3>\n<p style=\"margin:3px 0\">\u6309\u5185\u542b\u5b50\u5207\u9664\u6bd4\u4f8b\u5206\u6790\u5dee\u5f02\u526a\u63a5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u53d1\u73b0\u6ce8\u91ca\u4e4b\u5916\u7684\u63a5\u5934\uff0c\u9002\u5408\u4eba\u7fa4\u526a\u63a5\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4ec5\u6709\u526a\u63a5\u63a5\u5934\u7684\u4e8b\u4ef6\u53ef\u89c1\uff0c\u7ed3\u679c\u9700\u518d\u5173\u8054\u5177\u4f53\u5f02\u6784\u4f53<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u578b\u961f\u5217\u526a\u63a5\u7c07\u6784\u5efa\u53ca\u7edf\u8ba1\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/davidaknowles\/leafcutter\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"156\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">156\u3000Arriba<\/h3>\n<p style=\"margin:3px 0\">\u4ece STAR \u6bd4\u5bf9\u4e2d\u7b5b\u9009\u878d\u5408\u8f6c\u5f55\u672c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5229\u7528\u5d4c\u5408\u6bd4\u5bf9\u53ca\u8fc7\u6ee4\u89c4\u5219\u5feb\u901f\u5f62\u6210\u5019\u9009\u6e05\u5355<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u4e0a\u6e38 STAR \u8bbe\u7f6e\uff0c\u8bfb\u7a7f\u8f6c\u5f55\u7b49\u80cc\u666f\u4fe1\u53f7\u9700\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u76d8\u3002\u6574\u6279 RNA \u91cd\u6bd4\u5bf9\u5e38\u6bd4\u5019\u9009\u7b5b\u9009\u66f4\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/suhrig\/arriba\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"157\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">157\u3000STAR-Fusion<\/h3>\n<p style=\"margin:3px 0\">\u6839\u636e STAR \u5d4c\u5408\u8bfb\u6bb5\u8bc6\u522b\u878d\u5408\u4e8b\u4ef6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53c2\u8003\u8d44\u6e90\u548c\u8bc1\u636e\u8f93\u51fa\u4fbf\u4e8e\u5728\u961f\u5217\u4e2d\u7edf\u4e00\u7b5b\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u5e93\u548c\u8fc7\u6ee4\u5f71\u54cd\u5047\u9633\u6027\uff0c\u4f4e\u8868\u8fbe\u878d\u5408\u4ecd\u53ef\u80fd\u6f0f\u68c0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u53c2\u8003\u76d8\u3002\u591a\u6837\u672c\u4ece FASTQ \u8fd0\u884c\u65f6\u66f4\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/STAR-Fusion\/STAR-Fusion\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"158\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">158\u3000DESeq2<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u6709\u751f\u7269\u5b66\u91cd\u590d\u7684\u8ba1\u6570\u77e9\u9635\u505a\u5dee\u5f02\u8868\u8fbe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u79bb\u6563\u5ea6\u4f30\u8ba1\u548c\u5b9e\u9a8c\u8bbe\u8ba1\u652f\u6301\u6210\u719f\uff0c\u9002\u5408\u5e38\u89c4\u7ec4\u95f4\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bbe\u8ba1\u6df7\u6742\u65e0\u6cd5\u9760\u6a21\u578b\u81ea\u52a8\u6d88\u9664\uff0c\u5f52\u4e00\u5316\u8868\u8fbe\u503c\u4e0d\u80fd\u5f53\u539f\u59cb\u8ba1\u6570\u8f93\u5165<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5e38\u89c4 bulk \u8ba1\u6570\u77e9\u9635\u901a\u5e38\u8d1f\u8f7d\u8f83\u4f4e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/DESeq2.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"159\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">159\u3000edgeR<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u8d1f\u4e8c\u9879\u6a21\u578b\u548c\u51c6\u4f3c\u7136\u7b49\u65b9\u6cd5\u5206\u6790\u8ba1\u6570\u5dee\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u590d\u6742\u8bbe\u8ba1\u3001\u5bf9\u6bd4\u548c\u4f4e\u8868\u8fbe\u8fc7\u6ee4\uff0c\u7ec4\u95f4\u68c0\u9a8c\u7075\u6d3b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u5408\u7406\u4f30\u8ba1\u79bb\u6563\u5ea6\uff0c\u7f3a\u5c11\u751f\u7269\u5b66\u91cd\u590d\u65f6\u63a8\u65ad\u80fd\u529b\u6709\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5e38\u89c4\u57fa\u56e0\u8ba1\u6570\u8f83\u8f7b\uff0c\u5927\u91cf\u7279\u5f81\u6216\u5bf9\u6bd4\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/edgeR.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"160\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">160\u3000WGCNA<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u8de8\u6837\u672c\u8868\u8fbe\u76f8\u5173\u6027\u6784\u5efa\u5171\u8868\u8fbe\u7f51\u7edc\u6a21\u5757\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u628a\u6a21\u5757\u7279\u5f81\u4e0e\u6027\u72b6\u5173\u8054\uff0c\u652f\u6301\u5206\u5757\u5efa\u7f51<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5c0f\u6837\u672c\u76f8\u5173\u6027\u4e0d\u7a33\u5b9a\uff0c\u57fa\u56e0\u6570\u589e\u5927\u65f6\u62d3\u6251\u91cd\u53e0\u77e9\u9635\u8fc5\u901f\u81a8\u80c0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u5168\u57fa\u56e0\u5efa\u7f51\u3001\u591a\u4e2a\u7ec4\u7ec7\u548c\u53c2\u6570\u626b\u63cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cran.r-project.org\/package=WGCNA\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-09\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u8868\u89c2\u57fa\u56e0\u7ec4\u3001\u7532\u57fa\u5316\u4e0e\u4e09\u7ef4\u57fa\u56e0\u7ec4\uff08161\u2013180\uff09<\/summary>\n<p>\u5f00\u653e\u67d3\u8272\u8d28\u3001\u7532\u57fa\u5316\u4e0e\u67d3\u8272\u8d28\u4e92\u4f5c\u56de\u7b54\u4e0d\u540c\u95ee\u9898\u3002\u5206\u6790\u5cf0\u4e4b\u524d\u6838\u5bf9\u91cd\u590d\u3001\u7ebf\u7c92\u4f53\u6bd4\u4f8b\u4e0e\u80cc\u666f\u3002\u8ba1\u7b97\u7532\u57fa\u5316\u65f6\u540c\u65f6\u4fdd\u7559\u8986\u76d6\u6df1\u5ea6\u3002\u6bd4\u8f83\u63a5\u89e6\u56fe\u65f6\u7edf\u4e00\u5206\u8fa8\u7387\u548c\u6709\u6548\u6d4b\u5e8f\u6df1\u5ea6\uff0c\u907f\u514d\u5c06\u7a00\u758f\u7a0b\u5ea6\u8bef\u8bfb\u4e3a\u7ed3\u6784\u53d8\u5316\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"161\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">161\u3000MACS3<\/h3>\n<p style=\"margin:3px 0\">\u4ece ChIP-seq \u6216 ATAC-seq \u7b49\u5b9e\u9a8c\u68c0\u6d4b\u5bcc\u96c6\u5cf0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6309\u7a84\u5cf0\u6216\u5bbd\u5cf0\u7b49\u4fe1\u53f7\u7279\u5f81\u9009\u62e9\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u80cc\u666f\u3001\u91cd\u590d\u8bfb\u6bb5\u53ca\u7247\u6bb5\u8bbe\u7f6e\u4f1a\u5f71\u54cd\u5cf0\u8fb9\u754c\u548c\u5047\u9633\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5355\u4e2a\u666e\u901a\u5cf0\u96c6\u8f83\u8f7b\uff0c\u5927\u6279\u6837\u672c\u548c\u6df1\u8986\u76d6\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/macs3-project.github.io\/MACS\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"162\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">162\u3000BEDTools<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5cf0\u3001\u6ce8\u91ca\u3001\u53d8\u5f02\u548c\u6bd4\u5bf9\u533a\u95f4\u6c42\u4ea4\u96c6\u3001\u8986\u76d6\u6216\u6700\u8fd1\u90bb\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u5de5\u5177\u53ef\u8de8\u591a\u79cd\u57fa\u56e0\u7ec4\u683c\u5f0f\u7ec4\u5408\u533a\u95f4\uff0c\u6392\u5e8f\u8f93\u5165\u652f\u6301\u66f4\u7701\u5185\u5b58\u7684\u4ea4\u96c6\u7b97\u6cd5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5750\u6807\u4f53\u7cfb\u3001\u53c2\u8003\u7248\u672c\u3001\u6392\u5e8f\u987a\u5e8f\u6216\u94fe\u65b9\u5411\u4e0d\u4e00\u81f4\u90fd\u4f1a\u4ea7\u751f\u9519\u8bef\u5339\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8bfb\u5199\u3002\u6570\u4ebf\u4e2a\u7247\u6bb5\u6216\u53cd\u590d\u4e0e\u8bb8\u591a\u6ce8\u91ca\u8f68\u9053\u6c42\u4ea4\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bedtools.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"163\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">163\u3000deepTools<\/h3>\n<p style=\"margin:3px 0\">\u751f\u6210\u5f52\u4e00\u5316\u4fe1\u53f7\u8f68\u9053\u3001\u70ed\u56fe\u548c\u57fa\u56e0\u7ec4\u533a\u95f4\u7edf\u8ba1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5de5\u5177\u94fe\u53ef\u590d\u7528 bigWig \u7b49\u7d22\u5f15\u683c\u5f0f\uff0c\u4fbf\u4e8e\u6bd4\u8f83\u591a\u6761\u4ef6\u4fe1\u53f7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5206\u7bb1\u5bbd\u5ea6\u3001\u5f52\u4e00\u5316\u548c\u53c2\u8003\u533a\u57df\u9009\u62e9\u4f1a\u6539\u53d8\u53ef\u89c6\u5316\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u541e\u5410\u3002\u5927\u91cf BAM \u751f\u6210\u9ad8\u5206\u8fa8\u7387\u5168\u57fa\u56e0\u7ec4\u8f68\u9053<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/deeptools.readthedocs.io\/en\/develop\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"164\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">164\u3000DiffBind<\/h3>\n<p style=\"margin:3px 0\">\u6bd4\u8f83\u591a\u4e2a ChIP-seq \u6216 ATAC-seq \u6837\u672c\u7684\u5dee\u5f02\u7ed3\u5408\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u5171\u8bc6\u5cf0\u3001\u8bfb\u6bb5\u8ba1\u6570\u548c\u5b9e\u9a8c\u8bbe\u8ba1\u6574\u5408\u5728 R \u4e2d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5cf0\u96c6\u5b9a\u4e49\u53ca\u5f52\u4e00\u5316\u7b56\u7565\u4f1a\u6539\u53d8\u5dee\u5f02\u533a\u5217\u8868<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001BAM \u8bfb\u76d8\u3002\u591a\u5cf0\u96c6\u548c\u6570\u767e\u4e2a\u6837\u672c\u91cd\u65b0\u8ba1\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/DiffBind.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"165\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">165\u3000ChromHMM<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u9690\u9a6c\u5c14\u53ef\u592b\u6a21\u578b\u7ec4\u5408\u591a\u79cd\u6807\u8bb0\u63a8\u65ad\u67d3\u8272\u8d28\u72b6\u6001\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u591a\u4e2a\u7ec6\u80de\u7c7b\u578b\u590d\u7528\u540c\u4e00\u72b6\u6001\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e8c\u503c\u5316\u3001\u6807\u8bb0\u7ec4\u5408\u548c\u72b6\u6001\u6570\u51b3\u5b9a\u6a21\u578b\u53ef\u8fa8\u6027\uff0c\u72b6\u6001\u547d\u540d\u9700\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5168\u57fa\u56e0\u7ec4\u591a\u6807\u8bb0\u3001\u591a\u7ec6\u80de\u7c7b\u578b\u4e0e\u591a\u7ec4\u72b6\u6001\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/compbio.mit.edu\/ChromHMM\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"166\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">166\u3000TOBIAS<\/h3>\n<p style=\"margin:3px 0\">\u4ece ATAC-seq \u4f30\u8ba1\u8f6c\u5f55\u56e0\u5b50\u8db3\u8ff9\u548c\u6761\u4ef6\u5dee\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5305\u542b\u8f6c\u5ea7\u9176\u504f\u501a\u6821\u6b63\uff0c\u5e76\u53ef\u5728 motif \u4f4d\u70b9\u6bd4\u8f83\u4fe1\u53f7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8db3\u8ff9\u53d7\u9176\u5207\u504f\u501a\u3001\u6df1\u5ea6\u548c\u56e0\u5b50\u505c\u7559\u65f6\u95f4\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8f68\u9053\u76d8\u3002\u5168\u57fa\u56e0\u7ec4\u3001\u591a\u4e2a motif \u548c\u6761\u4ef6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/loosolab\/TOBIAS\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"167\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">167\u3000MEME Suite<\/h3>\n<p style=\"margin:3px 0\">\u53d1\u73b0\u3001\u6bd4\u8f83\u548c\u626b\u63cf DNA \u6216\u86cb\u767d\u5e8f\u5217\u57fa\u5e8f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u5957\u4ef6\u8986\u76d6\u4ece\u5934\u53d1\u73b0\u548c\u5df2\u77e5\u57fa\u5e8f\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u80cc\u666f\u6a21\u578b\u548c\u641c\u7d22\u7a7a\u95f4\u5f71\u54cd\u663e\u8457\u6027\uff0c\u5168\u91cf\u626b\u63cf\u6613\u4ea7\u751f\u5197\u4f59\u547d\u4e2d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5168\u57fa\u56e0\u7ec4\u591a\u57fa\u5e8f\u626b\u63cf\u53ca\u590d\u6742\u4ece\u5934\u53d1\u73b0<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC4489269\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"168\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">168\u3000HOMER<\/h3>\n<p style=\"margin:3px 0\">\u5728\u9009\u5b9a\u57fa\u56e0\u7ec4\u533a\u57df\u53d1\u73b0\u548c\u5bcc\u96c6\u8f6c\u5f55\u56e0\u5b50\u57fa\u5e8f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u540c\u65f6\u4f7f\u7528\u5df2\u77e5\u548c\u4ece\u5934 motif\uff0c\u9002\u5408\u5cf0\u96c6\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u80cc\u666f\u5e8f\u5217\u3001GC \u6216\u957f\u5ea6\u4e0d\u5339\u914d\u4f1a\u4ea7\u751f\u4f2a\u5bcc\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u5cf0\u96c6\u548c\u591a\u6b21\u4ece\u5934 motif \u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC2898526\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"169\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">169\u3000Bismark<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u4e9a\u786b\u9178\u6c22\u76d0\u6d4b\u5e8f\u505a\u6bd4\u5bf9\u3001\u53bb\u91cd\u590d\u53ca\u7532\u57fa\u5316\u63d0\u53d6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6d41\u7a0b\u6210\u719f\uff0c\u652f\u6301\u94fe\u7279\u5f02\u6587\u5e93\u5e76\u53ef\u8f93\u51fa\u80de\u5627\u5576\u4e0a\u4e0b\u6587<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f6c\u5316\u6548\u7387\u3001\u6587\u5e93\u65b9\u5411\u548c\u53c2\u8003\u6784\u5efa\u9519\u8bef\u90fd\u4f1a\u5f15\u5165\u504f\u5dee<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u4eba WGBS \u6216\u6df1\u5ea6\u690d\u7269\u7532\u57fa\u7ec4<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/FelixKrueger\/Bismark\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"170\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">170\u3000BWA-meth<\/h3>\n<p style=\"margin:3px 0\">\u7528 BWA \u7cfb\u5217\u540e\u7aef\u6bd4\u5bf9\u4e9a\u786b\u9178\u6c22\u76d0\u6d4b\u5e8f\u8bfb\u6bb5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f93\u51fa\u5e38\u89c4\u6bd4\u5bf9\u683c\u5f0f\uff0c\u65b9\u4fbf\u8854\u63a5\u8986\u76d6\u548c\u7532\u57fa\u5316\u63d0\u53d6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u4f7f\u7528\u76f8\u5e94\u8f6c\u6362\u53c2\u8003\uff0c\u7532\u57fa\u5316\u6c47\u603b\u8981\u63a5\u4e0b\u6e38\u5de5\u5177<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8bfb\u5199\u3002\u6279\u91cf WGBS \u7684\u5168\u91cf\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/brentp\/bwa-meth\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"171\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">171\u3000MethylDackel<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u4e9a\u786b\u9178\u6c22\u76d0\u6bd4\u5bf9\u7ed3\u679c\u63d0\u53d6\u4f4d\u70b9\u7532\u57fa\u5316\u6307\u6807\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6309\u4e0a\u4e0b\u6587\u548c\u6bd4\u5bf9\u8d28\u91cf\u8fc7\u6ee4\uff0c\u65b9\u4fbf\u7edf\u4e00\u5236\u8868<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bfb\u7aef\u504f\u501a\u3001\u91cd\u53e0\u914d\u5bf9\u548c\u4f4e\u8986\u76d6\u5904\u7406\u5f71\u54cd\u7532\u57fa\u5316\u6bd4\u4f8b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u5199\u3002\u6570\u5341\u81f3\u6570\u767e\u4e2a WGBS \u6837\u672c\u9010\u4f4d\u70b9\u626b\u63cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dpryan79\/MethylDackel\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"172\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">172\u3000methylKit<\/h3>\n<p style=\"margin:3px 0\">\u5728 R \u4e2d\u505a\u4f4d\u70b9\u6216\u533a\u57df\u5dee\u5f02\u7532\u57fa\u5316\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u8fc7\u6ee4\u3001\u5206\u7ec4\u53ca\u591a\u79cd\u6c47\u603b\u5c42\u7ea7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8986\u76d6\u9608\u503c\u548c\u8de8\u6837\u672c\u5171\u540c\u4f4d\u70b9\u7b5b\u9009\u4f1a\u6539\u53d8\u53ef\u5206\u6790\u533a\u57df<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u78c1\u76d8\u3002\u5168\u57fa\u56e0\u7ec4\u4f4d\u70b9\u4e0e\u5927\u961f\u5217\u4ea4\u96c6\u5408\u5e76<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/methylKit.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"173\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">173\u3000DSS<\/h3>\n<p style=\"margin:3px 0\">\u7528\u8d1d\u5854\u4e8c\u9879\u7b49\u6a21\u578b\u6bd4\u8f83\u6d4b\u5e8f\u7532\u57fa\u5316\u5e76\u8bc6\u522b\u5dee\u5f02\u533a\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u501f\u529b\u4f30\u8ba1\u79bb\u6563\u5ea6\uff0c\u9002\u5408\u5efa\u6a21\u91cd\u590d\u95f4\u53d8\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u533a\u57df\u8fb9\u754c\u4e0e\u5e73\u6ed1\u53c2\u6570\u6709\u5173\uff0c\u7a00\u758f\u8986\u76d6\u5904\u8bc1\u636e\u8f83\u5f31<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u961f\u5217\u9010 CpG \u68c0\u9a8c\u53ca\u5e73\u6ed1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/DSS.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"174\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">174\u3000modkit<\/h3>\n<p style=\"margin:3px 0\">\u6c47\u603b\u7eb3\u7c73\u5b54\u4fee\u9970\u78b1\u57fa BAM \u6216\u6bd4\u8f83\u4fee\u9970\u4fe1\u53f7\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5229\u7528\u9010\u8bfb\u6bb5\u4fee\u9970\u6982\u7387\uff0c\u652f\u6301\u805a\u5408\u6210\u57fa\u56e0\u7ec4\u8f68\u9053<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u6709\u6548\u7684\u4fee\u9970\u6807\u7b7e\u53ca\u9002\u914d\u7684\u8bc6\u522b\u6a21\u578b\uff0c\u9608\u503c\u5f71\u54cd\u6bd4\u4f8b<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u8bfb\u5199\u3002\u5168\u57fa\u56e0\u7ec4\u9ad8\u6df1\u5ea6\u4fee\u9970 BAM \u548c\u591a\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/nanoporetech\/modkit\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"175\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">175\u3000Juicer<\/h3>\n<p style=\"margin:3px 0\">\u4ece Hi-C \u8bfb\u6bb5\u6784\u5efa\u63a5\u89e6\u56fe\u5e76\u5f00\u5c55\u67d3\u8272\u4f53\u7ed3\u6784\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u96c6\u6210\u6bd4\u5bf9\u3001\u53bb\u91cd\u590d\u4e0e\u63a5\u89e6\u56fe\u751f\u6210\uff0c\u53ef\u8fde\u63a5\u73af\u68c0\u6d4b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0d\u540c\u6a21\u5757\u4f9d\u8d56\u548c\u5206\u8fa8\u7387\u5dee\u5f02\u5927\uff0c\u90e8\u5206 HiCCUPS \u8fd0\u884c\u6a21\u5f0f\u7528 GPU<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u4e34\u65f6\u76d8\u4e3a\u4e3b\u3002\u6df1\u5ea6 Hi-C\u3001\u591a\u5206\u8fa8\u7387\u6216\u7279\u5b9a\u73af\u68c0\u6d4b\u9636\u6bb5<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/aidenlab\/juicer\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"176\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">176\u3000Cooler<\/h3>\n<p style=\"margin:3px 0\">\u6784\u5efa\u3001\u5b58\u50a8\u3001\u67e5\u8be2\u548c\u5e73\u8861\u7a00\u758f\u67d3\u8272\u4f53\u63a5\u89e6\u77e9\u9635\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u591a\u5206\u8fa8\u7387 HDF5 \u5e03\u5c40\u4fbf\u4e8e\u5c40\u90e8\u8bfb\u53d6\u53ca\u5171\u4eab<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5206\u8fa8\u7387\u8d8a\u9ad8\uff0c\u975e\u96f6\u50cf\u7d20\u548c\u5199\u76d8\u8d1f\u62c5\u8d8a\u5927\uff0c\u8986\u76d6\u51b3\u5b9a\u662f\u5426\u53ef\u5e73\u8861<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u78c1\u76d8\u541e\u5410\u3001\u5185\u5b58\u3001CPU\u3002\u6df1\u6d4b\u5e8f\u548c\u591a\u5206\u8fa8\u7387\u5efa\u5e93<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cooler.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"177\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">177\u3000HiCExplorer<\/h3>\n<p style=\"margin:3px 0\">\u6784\u5efa\u53ca\u5206\u6790 Hi-C \u77e9\u9635\u3001\u7ed3\u6784\u57df\u548c\u5dee\u5f02\u63a5\u89e6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5c06\u77e9\u9635\u5904\u7406\u548c\u7ed3\u6784\u89e3\u91ca\u653e\u8fdb\u540c\u4e00\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000TAD \u8fb9\u754c\u548c\u5dee\u5f02\u7ed3\u679c\u4f9d\u8d56\u5206\u8fa8\u7387\u3001\u5f52\u4e00\u5316\u4e0e\u6d4b\u5e8f\u6df1\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u9ad8\u5206\u8fa8\u7387\u5168\u57fa\u56e0\u7ec4\u4e0e\u591a\u6761\u4ef6\u77e9\u9635<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/hicexplorer.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"178\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">178\u3000HiC-Pro<\/h3>\n<p style=\"margin:3px 0\">\u4ece Hi-C \u53cc\u7aef\u8bfb\u6bb5\u63d0\u53d6\u6709\u6548\u4e92\u4f5c\u5e76\u751f\u6210\u63a5\u89e6\u56fe\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u63d0\u4f9b\u9010\u6b65\u8d28\u63a7\u548c\u53ef\u5e76\u884c\u7684\u5904\u7406\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9650\u5236\u6027\u9176\u5207\u3001\u6587\u5e93\u7c7b\u578b\u4e0e\u6bd4\u5bf9\u8bbe\u5b9a\u9700\u8981\u5339\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u4e34\u65f6\u76d8\u3002\u9ad8\u6df1\u5ea6 Hi-C \u7684\u6bd4\u5bf9\u3001\u5206\u7c7b\u4e0e\u77e9\u9635\u6784\u5efa<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/nservant\/HiC-Pro\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"179\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">179\u3000pairtools<\/h3>\n<p style=\"margin:3px 0\">\u89e3\u6790\u3001\u6392\u5e8f\u5e76\u53bb\u91cd\u90bb\u8fd1\u8fde\u63a5\u5b9e\u9a8c\u7684\u8bfb\u6bb5\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6807\u51c6 pairs \u683c\u5f0f\u4fbf\u4e8e\u4e32\u6d41\uff0c\u5e76\u80fd\u8fde\u63a5\u591a\u79cd\u5efa\u56fe\u5de5\u5177<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6392\u5e8f\u548c\u53bb\u91cd\u4f9d\u8d56\u8f93\u5165\u683c\u5f0f\uff0c\u6210\u5bf9\u89c4\u6a21\u5927\u65f6\u4e34\u65f6\u76d8\u5403\u7d27<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u78c1\u76d8\u541e\u5410\u3001CPU\u3002\u6d77\u91cf\u8bfb\u6bb5\u5bf9\u5916\u6392\u548c\u53bb\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pairtools.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"180\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">180\u3000FitHiC2<\/h3>\n<p style=\"margin:3px 0\">\u5728 Hi-C \u6570\u636e\u4e2d\u4f30\u8ba1\u8ddd\u79bb\u76f8\u5173\u80cc\u666f\u5e76\u68c0\u6d4b\u663e\u8457\u63a5\u89e6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6309\u57fa\u56e0\u7ec4\u8ddd\u79bb\u5efa\u6a21\uff0c\u4fbf\u4e8e\u7b5b\u9009\u5019\u9009\u4e92\u4f5c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8986\u76d6\u548c\u591a\u91cd\u68c0\u9a8c\u4f1a\u9650\u5236\u9ad8\u5206\u8fa8\u7387\u4e0b\u7684\u7edf\u8ba1\u529f\u6548<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5168\u57fa\u56e0\u7ec4\u7ec6\u5206\u7bb1\u53ca\u5927\u91cf\u5019\u9009 bin \u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ay-lab\/fithic\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-10\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u4eba\u7fa4\u9057\u4f20\u3001GWAS \u4e0e\u57fa\u56e0\u578b\u586b\u8865\uff08181\u2013200\uff09<\/summary>\n<p>\u5148\u7edf\u4e00\u57fa\u56e0\u7ec4\u7ec4\u88c5\u3001\u7b49\u4f4d\u57fa\u56e0\u65b9\u5411\u4e0e\u6837\u672c\u8eab\u4efd\uff0c\u518d\u505a\u4eb2\u7f18\u3001\u7956\u6e90\u548c\u7f3a\u5931\u68c0\u67e5\u3002\u6bd4\u8f83\u63d2\u8865\u8d28\u91cf\u65f6\u6309\u7b49\u4f4d\u9891\u7387\u5206\u5c42\u3002\u505a\u5173\u8054\u5206\u6790\u65f6\u8bb0\u5f55\u6709\u6548\u6837\u672c\u6570\u4e0e\u534f\u53d8\u91cf\uff0c\u907f\u514d\u628a\u4e0d\u540c\u7814\u7a76\u96c6\u7684\u9891\u7387\u6216\u6548\u5e94\u76f4\u63a5\u62fc\u5728\u4e00\u8d77\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"181\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">181\u3000PLINK 2<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5927\u89c4\u6a21\u57fa\u56e0\u578b\u505a\u8d28\u63a7\u3001\u4e3b\u6210\u5206\u5206\u6790\u4e0e\u5173\u8054\u68c0\u9a8c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u7d27\u51d1\u683c\u5f0f\u4e0e\u5206\u5757\u7b97\u6cd5\u9002\u5408\u65e5\u5e38\u5904\u7406\u5927\u578b\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8868\u578b\u8bbe\u8ba1\u3001\u7b49\u4f4d\u57fa\u56e0\u7f16\u7801\u4e0e\u7fa4\u4f53\u7ed3\u6784\u5fc5\u987b\u6b63\u786e\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u57fa\u56e0\u578b\u76d8\u3002\u4e2a\u4f53\u6570\u3001\u4f4d\u70b9\u6570\u548c\u8868\u578b\u6570\u53e0\u52a0<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.cog-genomics.org\/plink\/2.0\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"182\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">182\u3000Hail<\/h3>\n<p style=\"margin:3px 0\">\u5206\u5e03\u5f0f\u5904\u7406\u5927\u578b\u53d8\u5f02\u77e9\u9635\u5e76\u505a\u961f\u5217\u8d28\u63a7\u548c\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8868\u683c\u4e0e\u77e9\u9635\u64cd\u4f5c\u53ef\u6269\u5c55\u5230\u8de8\u8282\u70b9\u548c\u5206\u533a\u5b58\u50a8<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5206\u533a\u3001\u6570\u636e\u91cd\u6392\u53ca\u96c6\u7fa4\u914d\u7f6e\u76f4\u63a5\u5f71\u54cd\u8fd0\u884c\u65f6\u95f4\u548c\u6210\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u96c6\u7fa4 CPU\u3001\u5185\u5b58\u3001\u7f51\u7edc\u548c\u78c1\u76d8\u3002\u751f\u7269\u6837\u672c\u5e93\u7ea7\u8054\u5408\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/hail.is\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"183\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">183\u3000REGENIE<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5206\u6b65\u56de\u5f52\u5bf9\u591a\u4e2a\u6570\u91cf\u6216\u4e8c\u5143\u6027\u72b6\u505a\u5168\u57fa\u56e0\u7ec4\u5173\u8054\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u590d\u7528\u7b2c\u4e00\u6b65\u7684\u9884\u6d4b\u7ed3\u679c\uff0c\u9002\u5408\u5927\u91cf\u6027\u72b6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8868\u578b\u3001\u534f\u53d8\u91cf\u548c\u6837\u672c\u5339\u914d\u8981\u4e00\u81f4\uff0c\u7a00\u6709\u75c5\u4f8b\u9700\u9009\u5408\u9002\u7684\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u578b\u961f\u5217\u4e58\u4ee5\u591a\u8868\u578b\u6216\u57fa\u56e0\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/rgcgithub.github.io\/regenie\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"184\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">184\u3000SAIGE<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5e7f\u4e49\u7ebf\u6027\u6df7\u5408\u6a21\u578b\u5206\u6790\u76f8\u5173\u4e2a\u4f53\u548c\u4e0d\u5e73\u8861\u75c5\u4f8b\u5bf9\u7167\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u63a7\u5236\u4eb2\u7f18\u5173\u7cfb\uff0c\u5e76\u652f\u6301\u5355\u53d8\u5f02\u53ca\u57fa\u56e0\u805a\u5408\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u96f6\u6a21\u578b\u62df\u5408\u4e0e\u7a00\u6709\u53d8\u5f02\u6821\u51c6\u90fd\u9700\u8981\u6070\u5f53\u7684\u8f93\u5165\u548c\u8bbe\u7f6e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u6837\u672c\u3001\u591a\u8868\u578b\u3001\u591a\u57fa\u56e0\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/saigegit\/SAIGE\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"185\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">185\u3000BOLT-LMM<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u590d\u6742\u6027\u72b6\u8fdb\u884c\u6df7\u5408\u6a21\u578b\u5168\u57fa\u56e0\u7ec4\u5173\u8054\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5229\u7528\u5168\u57fa\u56e0\u7ec4\u4fe1\u606f\u63a7\u5236\u7ed3\u6784\u5e76\u63d0\u9ad8\u90e8\u5206\u6027\u72b6\u7684\u529f\u6548<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u57fa\u56e0\u578b\u53ca\u7956\u6e90\u8bbe\u7f6e\u5f71\u54cd\u6821\u51c6\uff0c\u6781\u4e0d\u5e73\u8861\u4e8c\u5143\u6027\u72b6\u9700\u53e6\u884c\u8bc4\u4f30<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3002\u4e2a\u4f53\u6570\u3001\u6807\u8bb0\u6570\u548c\u6027\u72b6\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/alkesgroup.broadinstitute.org\/BOLT-LMM\/BOLT-LMM_manual.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"186\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">186\u3000GCTA\uff08\u542b fastGWA\uff09<\/h3>\n<p style=\"margin:3px 0\">\u6784\u5efa\u9057\u4f20\u5173\u7cfb\u77e9\u9635\u3001\u4f30\u8ba1\u65b9\u5dee\u6210\u5206\u5e76\u505a\u5173\u8054\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u540c\u4e00\u5957\u4ef6\u53ef\u5206\u6790\u9057\u4f20\u529b\uff0c\u5e76\u53ef\u9009\u62e9\u7a00\u758f\u5173\u7cfb\u77e9\u9635\u505a\u5927\u961f\u5217\u5173\u8054<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5b8c\u6574\u5173\u7cfb\u77e9\u9635\u968f\u4eba\u6570\u8fc5\u901f\u589e\u5927\uff0c\u9057\u4f20\u529b\u89e3\u91ca\u4f9d\u8d56\u6a21\u578b\u548c\u62bd\u6837<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5927\u5185\u5b58\u3001\u5173\u7cfb\u77e9\u9635\u76d8\u3002\u533a\u5206\u5168\u77e9\u9635\u4e0e\u7a00\u758f fastGWA<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/yanglab.westlake.edu.cn\/software\/gcta\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"187\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">187\u3000GEMMA<\/h3>\n<p style=\"margin:3px 0\">\u7528\u7ebf\u6027\u6df7\u5408\u6a21\u578b\u505a\u5173\u8054\u3001\u9057\u4f20\u529b\u53ca\u591a\u6027\u72b6\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5728\u6709\u4eb2\u7f18\u7ed3\u6784\u7684\u81ea\u7136\u7fa4\u4f53\u548c\u80b2\u79cd\u7fa4\u4f53\u4e2d\u5bb9\u6613\u5e94\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5927\u961f\u5217\u6c42\u89e3\u5173\u7cfb\u77e9\u9635\u65f6\u6210\u672c\u9ad8\uff0c\u6a21\u578b\u5047\u8bbe\u9700\u8981\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u4eba\u6570\u589e\u957f\u65f6\u77e9\u9635\u5206\u89e3\u548c\u91cd\u590d\u6027\u72b6\u62df\u5408\u6700\u91cd<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/genetics-statistics\/GEMMA\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"188\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">188\u3000METAL<\/h3>\n<p style=\"margin:3px 0\">\u6c47\u603b\u4e0d\u540c GWAS \u961f\u5217\u7684\u5173\u8054\u7edf\u8ba1\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4ec5\u4f9d\u8d56\u6c47\u603b\u7edf\u8ba1\uff0c\u9002\u5408\u8de8\u961f\u5217\u835f\u8403\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6548\u5e94\u7b49\u4f4d\u57fa\u56e0\u3001\u6837\u672c\u91cd\u53e0\u53ca\u961f\u5217\u5f02\u8d28\u6027\u9700\u5148\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u5199\u3002\u5355\u6027\u72b6\u8f83\u8f7b\uff0c\u6d77\u91cf\u4f4d\u70b9\u548c\u591a\u6027\u72b6\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/genome.sph.umich.edu\/wiki\/METAL\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"189\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">189\u3000LDSC<\/h3>\n<p style=\"margin:3px 0\">\u501f\u52a9 LD \u5206\u6570\u4f30\u8ba1\u9057\u4f20\u529b\u548c\u6027\u72b6\u95f4\u9057\u4f20\u76f8\u5173\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4f7f\u7528\u6c47\u603b\u7edf\u8ba1\uff0c\u65b9\u4fbf\u8de8\u7814\u7a76\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003 LD \u7684\u7956\u6e90\u548c\u6837\u672c\u91cf\u4f1a\u5f71\u54cd\u4f30\u8ba1\uff0c\u4f4e\u9057\u4f20\u529b\u6027\u72b6\u4e0d\u7a33\u5b9a<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5df2\u5907\u597d LD \u5206\u6570\u65f6\u8f83\u8f7b\uff0c\u81ea\u7b97\u53c2\u8003\u548c\u591a\u6027\u72b6\u5bf9\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bulik\/ldsc\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"190\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">190\u3000SuSiE\uff08susieR\uff09<\/h3>\n<p style=\"margin:3px 0\">\u505a\u4f4d\u70b9\u7cbe\u7ec6\u5b9a\u4f4d\u5e76\u4f30\u8ba1\u53ef\u4fe1\u96c6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5728\u540c\u4e00\u533a\u57df\u5efa\u6a21\u591a\u4e2a\u4fe1\u53f7\uff0c\u53ef\u7528\u4e2a\u4f53\u6216\u6c47\u603b\u8f93\u5165<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6c47\u603b\u7edf\u8ba1\u4e0e LD \u4e0d\u5339\u914d\u4f1a\u8bef\u5bfc\u7ed3\u679c\uff0c\u9ad8\u76f8\u5173\u4f4d\u70b9\u96be\u62c6\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u4f4d\u70b9 LD \u77e9\u9635\u548c\u8de8\u6027\u72b6\u6279\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/stephenslab.github.io\/susieR\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"191\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">191\u3000FINEMAP<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6c47\u603b\u7edf\u8ba1\u53ca LD \u77e9\u9635\u641c\u7d22\u5019\u9009\u56e0\u679c\u53d8\u5f02\u7ec4\u5408\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6bd4\u8f83\u591a\u53d8\u5f02\u914d\u7f6e\u5e76\u8f93\u51fa\u540e\u9a8c\u6982\u7387<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000LD \u6765\u6e90\u3001\u56e0\u679c\u6570\u4e0a\u9650\u548c\u6a21\u578b\u5148\u9a8c\u5f71\u54cd\u53ef\u4fe1\u96c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u533a\u57df\u3001\u591a\u7956\u6e90\u548c\u591a\u6027\u72b6\u91cd\u590d\u7ec6\u5b9a\u4f4d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC4866522\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"192\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">192\u3000Beagle<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u57fa\u56e0\u578b\u8fdb\u884c\u5b9a\u76f8\u6216\u7528\u53c2\u8003\u9762\u677f\u586b\u8865\u7f3a\u5931\u4f4d\u70b9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6309\u7a97\u53e3\u5904\u7406\uff0c\u53ef\u5728\u591a\u79cd\u7814\u7a76\u7fa4\u4f53\u4e2d\u4f7f\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u8003\u4e0e\u76ee\u6807\u7684\u7956\u6e90\u3001\u5750\u6807\u548c\u7b49\u4f4d\u57fa\u56e0\u9700\u8981\u5bf9\u9f50<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u9762\u677f\u89c4\u6a21\u3001\u76ee\u6807\u4e2a\u4f53\u6570\u53ca\u5e76\u53d1\u67d3\u8272\u4f53<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/faculty.washington.edu\/browning\/beagle\/beagle.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"193\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">193\u3000SHAPEIT5<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5927\u961f\u5217\u7684\u5e38\u89c1\u53ca\u7a00\u6709\u53d8\u5f02\u8fdb\u884c\u5206\u76f8\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5206\u9636\u6bb5\u8bbe\u8ba1\u9002\u5408\u751f\u7269\u6837\u672c\u5e93\u89c4\u6a21\u7684\u9ad8\u8986\u76d6\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9057\u4f20\u56fe\u8c31\u3001\u5206\u5757\u91cd\u53e0\u4ee5\u53ca\u7a00\u6709\u4f4d\u70b9\u5904\u7406\u9700\u5c0f\u5fc3\u534f\u8c03<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5168\u961f\u5217\u6309\u67d3\u8272\u4f53\u548c\u533a\u95f4\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/odelaneau.github.io\/shapeit\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"194\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">194\u3000Eagle2<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7fa4\u4f53\u4fe1\u606f\u6216\u53c2\u8003\u9762\u677f\u5bf9\u57fa\u56e0\u578b\u5206\u76f8\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u6279\u91cf\u67d3\u8272\u4f53\u5b9a\u76f8\uff0c\u53ef\u4e3a\u540e\u7eed\u586b\u8865\u51c6\u5907\u5355\u500d\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6807\u8bb0\u5bc6\u5ea6\u3001\u7fa4\u4f53\u4ee3\u8868\u6027\u548c\u7b49\u4f4d\u57fa\u56e0\u5bf9\u9f50\u5f71\u54cd\u76f8\u4f4d\u8d28\u91cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u4e2a\u4f53\u548c\u9762\u677f\u7684\u6574\u5957\u67d3\u8272\u4f53<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/alkesgroup.broadinstitute.org\/Eagle\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"195\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">195\u3000Minimac4<\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528\u5df2\u5b9a\u76f8\u7684\u53c2\u8003\u9762\u677f\u505a\u57fa\u56e0\u578b\u586b\u8865\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u538b\u7f29\u53c2\u8003\u9762\u677f\u4fbf\u4e8e\u591a\u961f\u5217\u91cd\u590d\u4f7f\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u5165\u5fc5\u987b\u5bf9\u9f50\u53c2\u8003\u4e14\u6709\u5408\u9002\u7684\u76f8\u4f4d\uff0c\u7a00\u6709\u4f4d\u70b9\u5e94\u67e5\u770b\u586b\u8865\u8d28\u91cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8f93\u51fa\u76d8\u3002\u9762\u677f\u3001\u6837\u672c\u4e0e\u67d3\u8272\u4f53\u5206\u5757\u91cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/statgen\/Minimac4\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"196\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">196\u3000IMPUTE5<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5927\u578b\u5355\u500d\u578b\u53c2\u8003\u9762\u677f\u586b\u8865\u76ee\u6807\u961f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5229\u7528\u538b\u7f29\u5339\u914d\u63d0\u9ad8\u5927\u9762\u677f\u6548\u7387\uff0c\u4fbf\u4e8e\u6309\u57fa\u56e0\u7ec4\u533a\u95f4\u8fd0\u884c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u9002\u5408\u7684\u5df2\u5b9a\u76f8\u9762\u677f\u548c\u76ee\u6807\u6570\u636e\uff0c\u5206\u5757\u8fb9\u754c\u987b\u534f\u8c03<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u78c1\u76d8\u3002\u6301\u7eed\u66f4\u65b0\u53c2\u8003\u9762\u677f\u6216\u53cd\u590d\u586b\u8865\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/jmarchini.org\/software\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"197\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">197\u3000ADMIXTURE<\/h3>\n<p style=\"margin:3px 0\">\u4f30\u8ba1\u4e2a\u4f53\u5728\u7ed9\u5b9a\u7ec4\u5206\u6570\u4e0b\u7684\u9057\u4f20\u7956\u6e90\u6bd4\u4f8b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7528\u4ea4\u53c9\u9a8c\u8bc1\u6bd4\u8f83\u7ec4\u5206\u6570\uff0c\u7ed3\u679c\u4fbf\u4e8e\u5c55\u793a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fde\u9501\u4e0d\u5e73\u8861\u3001\u6837\u672c\u62bd\u53d6\u548c\u6240\u9009 K \u5747\u4f1a\u5f71\u54cd\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3002\u591a\u4e2a K\u3001\u968f\u673a\u8d77\u70b9\u548c\u4ea4\u53c9\u9a8c\u8bc1\u8f6e\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/dalexander.github.io\/admixture\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"198\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">198\u3000EIGENSOFT<\/h3>\n<p style=\"margin:3px 0\">\u7528 smartpca \u7b49\u7a0b\u5e8f\u7814\u7a76\u7fa4\u4f53\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u517c\u5bb9\u5927\u91cf\u5386\u53f2\u4eba\u7fa4\u9057\u4f20\u9879\u76ee\uff0c\u53ef\u5206\u6790\u6216\u6295\u5f71\u65b0\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fde\u9501\u4f4d\u70b9\u548c\u4eb2\u7f18\u4e2a\u4f53\u4f1a\u626d\u66f2\u4e3b\u6210\u5206\uff0c\u683c\u5f0f\u8f6c\u6362\u9700\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6837\u672c\u77e9\u9635\u89c4\u6a21\u548c\u53cd\u590d\u6295\u5f71\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/DReichLab\/EIG\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"199\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">199\u3000ANGSD<\/h3>\n<p style=\"margin:3px 0\">\u5728\u4f4e\u8986\u76d6\u6d4b\u5e8f\u4e2d\u76f4\u63a5\u7528\u57fa\u56e0\u578b\u4f3c\u7136\u505a\u7fa4\u4f53\u7edf\u8ba1\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4fdd\u7559\u57fa\u56e0\u578b\u4e0d\u786e\u5b9a\u6027\uff0c\u9002\u5408\u91ce\u751f\u7fa4\u4f53<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bfb\u6df1\u3001\u8bef\u5dee\u6a21\u578b\u548c\u8fc7\u6ee4\u5bf9\u4f30\u8ba1\u654f\u611f\uff0c\u4e0d\u80fd\u5ffd\u7565\u6279\u6b21\u5dee\u5f02<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u76d8\u3002\u4eba\u7fa4\u6216\u975e\u6a21\u5f0f\u7fa4\u4f53\u5168\u57fa\u56e0\u7ec4\u8054\u5408\u626b\u63cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ANGSD\/angsd\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"200\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">200\u3000VCFtools<\/h3>\n<p style=\"margin:3px 0\">\u8fc7\u6ee4 VCF\u3001\u7edf\u8ba1\u9891\u7387\u53ca\u82e5\u5e72\u7fa4\u4f53\u9057\u4f20\u6307\u6807\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u547d\u4ee4\u76f4\u89c2\uff0c\u4fbf\u4e8e\u590d\u73b0\u6309\u7a97\u53e3\u8ba1\u7b97\u7684\u7ecf\u5178\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5bf9\u5927\u578b\u538b\u7f29\u961f\u5217\u7684\u5904\u7406\u6548\u7387\u53ca\u590d\u6742\u5b57\u6bb5\u64cd\u4f5c\u6709\u5c40\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u8bfb\u53d6\u3002\u666e\u901a\u53d8\u5f02\u8868\u8d1f\u8f7d\u4f4e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/vcftools.github.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-11\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u7cfb\u7edf\u53d1\u80b2\u3001\u5206\u5b50\u8fdb\u5316\u4e0e\u7fa4\u4f53\u6a21\u62df\uff08201\u2013220\uff09<\/summary>\n<p>\u4ece\u5e8f\u5217\u6bd4\u5bf9\u3001\u6a21\u578b\u9009\u62e9\u5230\u5efa\u6811\uff0c\u5404\u6b65\u9aa4\u7684\u4e0d\u786e\u5b9a\u6027\u4f1a\u5411\u4e0b\u4f20\u9012\u3002\u5bf9\u62fc\u63a5\u6570\u636e\u7559\u5b58\u5206\u533a\u5b9a\u4e49\uff0c\u68c0\u67e5\u7f3a\u5931\u548c\u4f4e\u8d28\u91cf\u5217\u3002\u8282\u70b9\u652f\u6301\u5ea6\u3001\u5206\u652f\u957f\u5ea6\u4e0e\u5206\u6b67\u65f6\u95f4\u542b\u4e49\u5404\u5f02\uff0c\u4f7f\u7528\u5206\u5b50\u949f\u8fd8\u9700\u8981\u76f8\u5e94\u6821\u51c6\u4f9d\u636e\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"201\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">201\u3000MAFFT<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u6838\u9178\u6216\u86cb\u767d\u8d28\u5e8f\u5217\u505a\u591a\u5e8f\u5217\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4ee5\u5728\u5feb\u901f\u548c\u9ad8\u7cbe\u5ea6\u8fed\u4ee3\u7b56\u7565\u4e4b\u95f4\u9009\u62e9<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5e8f\u5217\u5dee\u5f02\u5927\u6216\u63d2\u5165\u7f3a\u5931\u957f\u65f6\u5bf9\u9f50\u4e0d\u786e\u5b9a\uff0c\u9ad8\u7cbe\u5ea6\u6a21\u5f0f\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3002\u5f88\u591a\u957f\u5e8f\u5217\u3001\u9ad8\u7cbe\u5ea6\u6a21\u5f0f\u6216\u6279\u91cf\u57fa\u56e0\u5bb6\u65cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/mafft.cbrc.jp\/alignment\/software\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"202\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">202\u3000MUSCLE<\/h3>\n<p style=\"margin:3px 0\">\u505a\u591a\u5e8f\u5217\u6bd4\u5bf9\uff0c\u5e76\u53ef\u751f\u6210\u66ff\u4ee3\u6bd4\u5bf9\u96c6\u5408\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6bd4\u8f83\u4e0d\u540c\u5bf9\u9f50\u5bf9\u4e0b\u6e38\u7cfb\u7edf\u6811\u7684\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u7cbe\u5ea6\u7b56\u7565\u548c\u591a\u5957\u66ff\u4ee3\u6bd4\u5bf9\u4f1a\u589e\u52a0\u8017\u65f6\u4e0e\u5b58\u50a8<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u578b\u5e8f\u5217\u96c6\u53ca\u591a\u7ec4\u66ff\u4ee3\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/drive5.com\/muscle5\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"203\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">203\u3000Clustal Omega<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u5f15\u5bfc\u6811\u53ca\u8c31\u6a21\u578b\u5bf9\u5927\u91cf\u540c\u6e90\u5e8f\u5217\u505a\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u5feb\u901f\u5f62\u6210\u86cb\u767d\u5bb6\u65cf\u5bf9\u9f50\uff0c\u547d\u4ee4\u884c\u4fbf\u4e8e\u6279\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5ea6\u5206\u5316\u3001\u957f\u63d2\u5165\u6216\u7ed3\u6784\u57df\u91cd\u6392\u5904\u4ecd\u9700\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u86cb\u767d\u5bb6\u65cf\u53ca\u5206\u5e03\u5dee\u5f02\u8f83\u5927\u7684\u5927\u5e8f\u5217\u96c6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.ebi.ac.uk\/jdispatcher\/docs\/faqs\/clustal\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"204\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">204\u3000PRANK<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7cfb\u7edf\u53d1\u80b2\u6a21\u578b\u533a\u5206\u63d2\u5165\u4e0e\u7f3a\u5931\uff0c\u6784\u5efa\u591a\u5e8f\u5217\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5bf9\u7f16\u7801\u5e8f\u5217\u7684\u8fdb\u5316\u5206\u6790\u80fd\u4fdd\u7559\u66f4\u660e\u786e\u7684\u63d2\u7f3a\u5047\u8bbe<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u679c\u5bf9\u5f15\u5bfc\u6811\u654f\u611f\uff0c\u590d\u6742\u5e8f\u5217\u96c6\u8fd0\u884c\u8f83\u6162<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u591a\u57fa\u56e0\u7ec4\u6b63\u4ea4\u5bb6\u65cf\u3001\u6309\u5bc6\u7801\u5b50\u53cd\u590d\u5bf9\u9f50<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/ariloytynoja.github.io\/prank-msa\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"205\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">205\u3000trimAl<\/h3>\n<p style=\"margin:3px 0\">\u6309\u7f3a\u53e3\u548c\u4fdd\u5b88\u6027\u7b49\u89c4\u5219\u4fee\u526a\u591a\u5e8f\u5217\u6bd4\u5bf9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u6279\u91cf\u53bb\u9664\u4f4e\u53ef\u4fe1\u5217\uff0c\u4fbf\u4e8e\u5efa\u6811\u524d\u7edf\u4e00\u7b5b\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8fc7\u5ea6\u4fee\u526a\u4f1a\u5220\u9664\u771f\u5b9e\u8fdb\u5316\u4fe1\u53f7\uff0c\u9608\u503c\u8981\u968f\u5bb6\u65cf\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5355\u5bb6\u65cf\u901a\u5e38\u5f88\u8f7b\uff0c\u66f4\u591a\u662f\u5efa\u6811\u9879\u76ee\u7684\u914d\u5957\u73af\u8282<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/inab\/trimal\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"206\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">206\u3000IQ-TREE<\/h3>\n<p style=\"margin:3px 0\">\u7528\u6700\u5927\u4f3c\u7136\u3001\u6a21\u578b\u9009\u62e9\u548c\u81ea\u4e3e\u6784\u5efa\u7cfb\u7edf\u6811\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u96c6\u6210\u6a21\u578b\u6bd4\u8f83\u3001\u5206\u533a\u548c\u5206\u652f\u652f\u6301\u5ea6\uff0c\u9002\u5408\u591a\u7c7b\u5e8f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u641c\u7d22\u3001\u590d\u6742\u5206\u533a\u548c\u652f\u6301\u5ea6\u4f30\u8ba1\u4f1a\u589e\u52a0\u8ba1\u7b97\uff0c\u62d3\u6251\u4ecd\u53d7\u6bd4\u5bf9\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3002\u5927\u6bd4\u5bf9\u3001\u591a\u57fa\u56e0\u5206\u533a\u548c\u91cd\u590d\u5efa\u6811<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/iqtree.github.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"207\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">207\u3000RAxML-NG<\/h3>\n<p style=\"margin:3px 0\">\u641c\u7d22\u6700\u5927\u4f3c\u7136\u7cfb\u7edf\u6811\u5e76\u4f30\u8ba1\u5206\u652f\u652f\u6301\u5ea6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8fd0\u884c\u591a\u4e2a\u8d77\u59cb\u6811\uff0c\u652f\u6301\u591a\u7ebf\u7a0b\u53ca MPI \u573a\u666f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u641c\u7d22\u4e0e\u81ea\u4e3e\u5747\u9700\u91cd\u590d\uff0c\u6a21\u578b\u6216\u8f93\u5165\u5206\u533a\u9009\u9519\u4f1a\u5f71\u54cd\u63a8\u65ad<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u96c6\u7fa4 CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u7269\u79cd\u3001\u957f\u6bd4\u5bf9\u4e0e\u81ea\u4e3e\u91cd\u590d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/amkozlov\/raxml-ng\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"208\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">208\u3000FastTree<\/h3>\n<p style=\"margin:3px 0\">\u5feb\u901f\u8fd1\u4f3c\u6784\u5efa\u5927\u578b\u5e8f\u5217\u6bd4\u5bf9\u7684\u7cfb\u7edf\u6811\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5927\u578b\u521d\u7b5b\u53ef\u5728\u8f83\u4f4e\u8ba1\u7b97\u5f00\u9500\u4e0b\u83b7\u5f97\u53c2\u8003\u62d3\u6251<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u641c\u7d22\u8fd1\u4f3c\uff0c\u5173\u952e\u5206\u652f\u5b9c\u7528\u66f4\u5145\u5206\u7684\u6a21\u578b\u4e0e\u641c\u7d22\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u8d85\u591a\u5e8f\u5217\u7684\u521d\u7b5b\u6216\u6279\u91cf\u57fa\u56e0\u6811<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/morgannprice.github.io\/fasttree\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"209\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">209\u3000MrBayes<\/h3>\n<p style=\"margin:3px 0\">\u7528\u8d1d\u53f6\u65af MCMC \u4f30\u8ba1\u6811\u62d3\u6251\u4e0e\u53c2\u6570\u540e\u9a8c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5904\u7406\u5206\u533a\u548c\u590d\u6742\u6a21\u578b\uff0c\u5e76\u8f93\u51fa\u540e\u9a8c\u4e0d\u786e\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u94fe\u6df7\u5408\u53ca\u6536\u655b\u9700\u8981\u8bca\u65ad\uff0c\u8f83\u5927\u7684\u6811\u7a7a\u95f4\u53ef\u80fd\u8fd0\u884c\u5f88\u4e45<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3002\u5e76\u884c\u72ec\u7acb\u94fe\u3001\u957f\u94fe\u548c\u7075\u654f\u5ea6\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/nbisweden.github.io\/MrBayes\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"210\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">210\u3000BEAST 2<\/h3>\n<p style=\"margin:3px 0\">\u63a8\u65ad\u65f6\u95f4\u6807\u5b9a\u7cfb\u7edf\u6811\u3001\u7fa4\u4f53\u5386\u53f2\u7b49\u8d1d\u53f6\u65af\u6a21\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ed3\u5408\u91c7\u6837\u65f6\u95f4\u548c\u5206\u5b50\u949f\uff0c\u63d2\u4ef6\u652f\u6301\u591a\u79cd\u8fdb\u5316\u6a21\u578b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5148\u9a8c\u3001\u6821\u51c6\u70b9\u548c\u94fe\u6536\u655b\u76f4\u63a5\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u957f\u65f6\u95f4 CPU\uff0c\u90e8\u5206\u4f3c\u7136\u53ef\u501f BEAGLE \u7528 GPU\u3002\u6309\u72ec\u7acb\u94fe\u7d2f\u8ba1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.beast2.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"211\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">211\u3000RevBayes<\/h3>\n<p style=\"margin:3px 0\">\u7528\u53ef\u7f16\u7a0b\u56fe\u6a21\u578b\u505a\u8d1d\u53f6\u65af\u7cfb\u7edf\u53d1\u80b2\u548c\u6027\u72b6\u6f14\u5316\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5efa\u6a21\u81ea\u7531\u5ea6\u9ad8\uff0c\u9002\u5408\u8bbe\u8ba1\u4e0e\u6bd4\u8f83\u590d\u6742\u6f14\u5316\u5047\u8bbe<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u7f16\u5199\u3001\u5148\u9a8c\u68c0\u67e5\u4e0e\u6536\u655b\u8bca\u65ad\u6709\u8f83\u9ad8\u95e8\u69db<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u591a\u6761 MCMC \u94fe\u3001\u6a21\u578b\u5bf9\u6bd4\u548c\u957f\u65f6\u95f4\u91cd\u590d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/revbayes.github.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"212\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">212\u3000ASTRAL<\/h3>\n<p style=\"margin:3px 0\">\u628a\u591a\u68f5\u57fa\u56e0\u6811\u6c47\u603b\u4e3a\u7269\u79cd\u6811\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u57fa\u56e0\u6811\u4e0d\u4e00\u81f4\u65f6\u5904\u7406\u4e0d\u5b8c\u5168\u8c31\u7cfb\u5206\u9009\u7684\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0a\u6e38\u57fa\u56e0\u6811\u8bef\u5dee\u3001\u65c1\u7cfb\u540c\u6e90\u6216\u57fa\u56e0\u6d41\u4f1a\u5e72\u6270\u7269\u79cd\u6811\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u7269\u79cd\u6570\u548c\u8f93\u5165\u57fa\u56e0\u6811\u6570\u5171\u540c\u51b3\u5b9a\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/smirarab\/ASTRAL\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"213\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">213\u3000PAML<\/h3>\n<p style=\"margin:3px 0\">\u5728\u5bc6\u7801\u5b50\u6216\u6838\u9178\u6a21\u578b\u4e0b\u4f30\u8ba1\u8fdb\u5316\u53c2\u6570\u3001\u68c0\u9a8c\u9009\u62e9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000codeml \u7b49\u6a21\u578b\u9002\u5408\u5206\u652f\u6216\u4f4d\u70b9\u5c42\u9762\u7684\u5047\u8bbe\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9519\u8bef\u5bf9\u9f50\u548c\u9519\u8bef\u6811\u4f1a\u4ea7\u751f\u5047\u9633\u6027\uff0c\u591a\u8d77\u70b9\u9700\u6bd4\u8f83\u4f3c\u7136<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u6570\u5343\u6b63\u4ea4\u5bb6\u65cf\u3001\u591a\u5206\u652f\u53ca\u591a\u8d77\u70b9\u6a21\u578b\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/abacus-gene\/paml\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"214\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">214\u3000HyPhy<\/h3>\n<p style=\"margin:3px 0\">\u7528\u7cfb\u7edf\u53d1\u80b2\u4f3c\u7136\u65b9\u6cd5\u68c0\u9a8c\u9009\u62e9\u4e0e\u8fdb\u5316\u901f\u7387\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u63d0\u4f9b\u591a\u79cd\u9884\u8bbe\u65b9\u6cd5\uff0c\u80fd\u5728\u57fa\u56e0\u3001\u5206\u652f\u6216\u4f4d\u70b9\u5c42\u9762\u68c0\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u91cd\u7ec4\u3001\u6bd4\u5bf9\u9519\u8bef\u53ca\u591a\u6b21\u68c0\u9a8c\u4f1a\u5f71\u54cd\u663e\u8457\u6027\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3002\u5168\u57fa\u56e0\u7ec4\u7f16\u7801\u533a\u3001\u591a\u6a21\u578b\u548c\u91cd\u590d\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.hyphy.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"215\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">215\u3000PHAST<\/h3>\n<p style=\"margin:3px 0\">\u7528\u7cfb\u7edf\u53d1\u80b2\u9690\u9a6c\u5c14\u53ef\u592b\u6216\u4f3c\u7136\u6a21\u578b\u5206\u6790\u5e8f\u5217\u4fdd\u5b88\u6027\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4ece\u591a\u7269\u79cd\u6bd4\u5bf9\u4ea7\u751f\u9010\u4f4d\u70b9\u4fdd\u5b88\u6216\u52a0\u901f\u4fe1\u53f7<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e2d\u6027\u6a21\u578b\u3001\u7269\u79cd\u6811\u4e0e\u5bf9\u9f50\u54c1\u8d28\u51b3\u5b9a\u57fa\u7ebf<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8f68\u9053\u76d8\u3002\u5168\u57fa\u56e0\u7ec4\u591a\u7269\u79cd\u6bd4\u5bf9\u9010\u4f4d\u70b9\u8bc4\u5206<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/CshlSiepelLab\/phast\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"216\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">216\u3000TreeTime<\/h3>\n<p style=\"margin:3px 0\">\u5728\u5df2\u6709\u6811\u548c\u5e26\u65e5\u671f\u7684\u5e8f\u5217\u4e0a\u63a8\u65ad\u65f6\u95f4\u6811\u6216\u7956\u5148\u72b6\u6001\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u75c5\u539f\u76d1\u6d4b\u4e2d\u7684\u5feb\u901f\u66f4\u65b0\u548c\u65f6\u95f4\u4e00\u81f4\u6027\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u65f6\u95f4\u4fe1\u53f7\u5f31\u3001\u91c7\u6837\u65e5\u671f\u4e0d\u51c6\u6216\u6811\u62d3\u6251\u9519\u8bef\u4f1a\u5f71\u54cd\u5b9a\u5e74<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5f88\u591a\u57fa\u56e0\u7ec4\u6216\u9ad8\u9891\u53cd\u590d\u66f4\u65b0\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/treetime.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"217\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">217\u3000UShER<\/h3>\n<p style=\"margin:3px 0\">\u628a\u65b0\u75c5\u539f\u4f53\u5e8f\u5217\u653e\u5165\u5df2\u6709\u7a81\u53d8\u6ce8\u91ca\u6811\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5728\u5927\u6811\u4e0a\u5feb\u901f\u589e\u91cf\u653e\u7f6e\uff0c\u9002\u5408\u6301\u7eed\u76d1\u6d4b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u679c\u4f9d\u8d56\u53c2\u8003\u6811\u4e0e\u8f93\u5165\u53d8\u5f02\uff0c\u91cd\u7ec4\u548c\u4f4e\u8d28\u5e8f\u5217\u9700\u6392\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001CPU\u3002\u7ef4\u62a4\u5927\u578b\u80cc\u666f\u6811\u548c\u6301\u7eed\u6279\u91cf\u653e\u7f6e<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/yatisht\/usher\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"218\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">218\u3000Nextstrain Augur<\/h3>\n<p style=\"margin:3px 0\">\u7f16\u6392\u75c5\u539f\u4f53\u5e8f\u5217\u6bd4\u5bf9\u3001\u5efa\u6811\u3001\u5b9a\u5e74\u548c\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6b65\u9aa4\u53ef\u590d\u73b0\uff0c\u5e76\u80fd\u8f93\u51fa\u4f9b\u4ea4\u4e92\u5c55\u793a\u7684\u6570\u636e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u91c7\u6837\u7b56\u7565\u4f1a\u5f71\u54cd\u4f20\u64ad\u63a8\u65ad\uff0c\u4e0d\u540c\u540e\u7aef\u7684\u8017\u65f6\u5dee\u5f02\u5927<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u78c1\u76d8\u3002\u5927\u961f\u5217\u91cd\u5efa\u6811\u4e0e\u56fa\u5b9a\u9891\u7387\u66f4\u65b0<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/docs.nextstrain.org\/projects\/augur\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"219\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">219\u3000msprime<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u6811\u5e8f\u5217\u8868\u793a\u6a21\u62df\u7fa4\u4f53\u7956\u5148\u91cd\u7ec4\u56fe\u53ca\u9057\u4f20\u53d8\u5f02\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9ad8\u6548\u8868\u793a\u5927\u6837\u672c\u7684\u5171\u7956\u5386\u53f2\uff0c\u9002\u5408\u505a\u65b9\u6cd5\u6821\u51c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u548c\u4eba\u53e3\u53f2\u8981\u660e\u786e\uff0c\u590d\u6742\u7684\u524d\u5411\u9009\u62e9\u8fc7\u7a0b\u9700\u53e6\u5efa\u6a21<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u8d85\u591a\u91cd\u590d\u3001\u590d\u6742\u4eba\u53e3\u53f2\u548c\u957f\u67d3\u8272\u4f53\u6a21\u62df<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/tskit-dev\/msprime\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"220\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">220\u3000SLiM<\/h3>\n<p style=\"margin:3px 0\">\u524d\u5411\u6a21\u62df\u9009\u62e9\u3001\u8fc1\u79fb\u53ca\u590d\u6742\u7fa4\u4f53\u9057\u4f20\u573a\u666f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u811a\u672c\u53ef\u8868\u8fbe\u751f\u6001\u3001\u57fa\u56e0\u4e0e\u9009\u62e9\u4e4b\u95f4\u7684\u4ea4\u4e92<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u771f\u5b9e\u6709\u6548\u7fa4\u4f53\u5927\u5c0f\u548c\u957f\u65f6\u95f4\u5c3a\u5ea6\u4f1a\u663e\u8457\u589e\u52a0\u6a21\u62df\u6210\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u7fa4\u4f53\u3001\u957f\u67d3\u8272\u4f53\u3001\u591a\u53c2\u6570\u548c\u968f\u673a\u91cd\u590d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/messerlab.org\/slim\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-12\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u5e8f\u5217\u68c0\u7d22\u3001\u86cb\u767d\u7ed3\u6784\u9884\u6d4b\u4e0e\u8bbe\u8ba1\uff08221\u2013240\uff09<\/summary>\n<p>\u5e8f\u5217\u68c0\u7d22\u5148\u660e\u786e\u6570\u636e\u5e93\u548c\u8986\u76d6\u8981\u6c42\u3002\u7ed3\u6784\u9884\u6d4b\u8fdb\u4e00\u6b65\u533a\u5206\u5355\u94fe\u6298\u53e0\u3001\u94fe\u95f4\u754c\u9762\u548c\u914d\u4f53\u6784\u8c61\u3002\u7b5b\u9009\u5019\u9009\u65f6\u53ef\u540c\u65f6\u67e5\u770b\u8986\u76d6\u3001\u5c40\u90e8\u53ef\u4fe1\u5ea6\u3001\u4e0d\u540c\u79cd\u5b50\u7684\u7a33\u5b9a\u6027\uff0c\u5e76\u8bb0\u5f55\u54ea\u4e9b\u7ed3\u679c\u6709\u72ec\u7acb\u5b9e\u9a8c\u652f\u6301\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"221\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">221\u3000BLAST+<\/h3>\n<p style=\"margin:3px 0\">\u672c\u5730\u641c\u7d22\u5e8f\u5217\u6570\u636e\u5e93\u5e76\u8bc6\u522b\u76f8\u4f3c\u5e8f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u9009\u62e9\u6838\u9178\u3001\u86cb\u767d\u548c\u7ffb\u8bd1\u6a21\u5f0f\uff0c\u547d\u4e2d\u89e3\u91ca\u6210\u719f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8d85\u5927\u5e93\u548c\u9ad8\u7075\u654f\u641c\u7d22\u6210\u672c\u9ad8\uff0c\u76f8\u4f3c\u547d\u4e2d\u987b\u7ed3\u5408\u8986\u76d6\u548c\u529f\u80fd\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u6570\u636e\u5e93\u76d8\u3002\u5168\u86cb\u767d\u7ec4\u3001\u591a\u6837\u672c\u53ca\u5b9a\u671f\u91cd\u641c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/blast.ncbi.nlm.nih.gov\/doc\/blast-help\/downloadblastdata.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"222\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">222\u3000DIAMOND<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u86cb\u767d\u8d28\u6216\u7ffb\u8bd1\u540e\u7684\u6838\u9178\u8bfb\u6bb5\u505a\u9ad8\u901a\u91cf\u540c\u6e90\u641c\u7d22\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u901f\u5ea6\u4e0e\u7075\u654f\u5ea6\u53ef\u8c03\uff0c\u9002\u5408\u5b8f\u57fa\u56e0\u7ec4\u548c\u86cb\u767d\u529f\u80fd\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u901f\u5ea6\u6863\u4f4d\u3001\u6570\u636e\u5e93\u548c\u5206\u7c7b\u89c4\u5219\u51b3\u5b9a\u4f4e\u540c\u6e90\u547d\u4e2d\u7684\u8986\u76d6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u6d77\u91cf\u8bfb\u6bb5\u4e0e\u5927\u578b\u86cb\u767d\u5e93<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/bbuchfink\/diamond\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"223\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">223\u3000MMseqs2<\/h3>\n<p style=\"margin:3px 0\">\u5728\u5927\u89c4\u6a21\u5e8f\u5217\u96c6\u5408\u4e2d\u641c\u7d22\u3001\u805a\u7c7b\u5e76\u8f85\u52a9\u751f\u6210 MSA\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u590d\u7528\u7d22\u5f15\uff0c\u90e8\u5206\u86cb\u767d\u6216 profile \u641c\u7d22\u652f\u6301 GPU<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u901f\u5ea6\u3001\u7075\u654f\u5ea6\u4e0e\u7d22\u5f15\u7a7a\u95f4\u6709\u53d6\u820d\uff0cGPU \u80fd\u529b\u53d6\u51b3\u4e8e\u5b50\u547d\u4ee4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u7d22\u5f15\u76d8\u3002\u652f\u6301\u7684\u641c\u7d22\u53ef\u7528 GPU\uff0c\u5efa\u5e93\u4e0e\u805a\u7c7b\u53e6\u6d4b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/soedinglab\/MMseqs2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"224\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">224\u3000HMMER<\/h3>\n<p style=\"margin:3px 0\">\u7528\u9690\u9a6c\u5c14\u53ef\u592b\u8c31\u6a21\u578b\u641c\u7d22\u86cb\u767d\u5bb6\u65cf\u548c\u7ed3\u6784\u57df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f83\u9002\u5408\u68c0\u6d4b\u8fdc\u7f18\u540c\u6e90\uff0c\u80fd\u5b9a\u4f4d\u547d\u4e2d\u7ed3\u6784\u57df\u8fb9\u754c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u578b\u8986\u76d6\u4e0e\u9608\u503c\u51b3\u5b9a\u547d\u4e2d\uff0c\u8fdc\u7f18\u547d\u4e2d\u4ecd\u9700\u7ed3\u5408\u4e0a\u4e0b\u6587<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5e93\u76d8\u3002\u5168\u86cb\u767d\u7ec4\u4e58\u5927\u91cf profile \u6216\u91cd\u590d\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.hmmer.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"225\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">225\u3000HH-suite3<\/h3>\n<p style=\"margin:3px 0\">\u901a\u8fc7 profile \u5bf9 profile \u6bd4\u5bf9\u53d1\u73b0\u8fdc\u7f18\u540c\u6e90\u4e0e\u6a21\u677f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5bf9\u4f4e\u5e8f\u5217\u76f8\u4f3c\u5ea6\u7684\u6f5c\u5728\u540c\u6e90\u5173\u7cfb\u8f83\u654f\u611f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u5165\u591a\u5e8f\u5217\u6bd4\u5bf9\u8d28\u91cf\u548c\u6570\u636e\u5e93\u9009\u62e9\u663e\u8457\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u6279\u91cf\u5bb6\u65cf\u641c\u7d22\u53ca\u53cd\u590d\u751f\u6210 MSA<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/soedinglab\/hh-suite\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"226\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">226\u3000InterProScan<\/h3>\n<p style=\"margin:3px 0\">\u6574\u5408\u591a\u4e2a\u7b7e\u540d\u6570\u636e\u5e93\u8fdb\u884c\u86cb\u767d\u5bb6\u65cf\u4e0e\u7ed3\u6784\u57df\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4e00\u6b21\u8fd0\u884c\u80fd\u53d6\u5f97\u591a\u6765\u6e90\u7684\u529f\u80fd\u8bc1\u636e\u548c\u4ea4\u53c9\u5f15\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6210\u5458\u5e93\u7248\u672c\u53ca\u542f\u7528\u7684\u5206\u6790\u9879\u4f1a\u6539\u53d8\u8017\u65f6\u4e0e\u8986\u76d6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u591a\u7269\u79cd\u86cb\u767d\u7ec4\u4e0e\u5168\u5957\u7b7e\u540d\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/interpro-documentation.readthedocs.io\/en\/latest\/interproscan.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"227\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">227\u3000eggNOG-mapper<\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528\u76f4\u7cfb\u540c\u6e90\u5173\u7cfb\u6279\u91cf\u8f6c\u79fb\u529f\u80fd\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7edf\u4e00\u751f\u6210\u591a\u4e2a\u529f\u80fd\u4f53\u7cfb\u7684\u6807\u6ce8\uff0c\u9002\u5408\u5927\u578b\u57fa\u56e0\u76ee\u5f55<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u672a\u77e5\u7c7b\u7fa4\u6216\u65c1\u7cfb\u540c\u6e90\u4f1a\u964d\u4f4e\u8f6c\u79fb\u6ce8\u91ca\u7684\u786e\u5b9a\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u6570\u636e\u5e93\u76d8\u3002\u5b8f\u57fa\u56e0\u96c6\u3001MAG \u961f\u5217\u6216\u8de8\u7269\u79cd\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/eggnogdb\/eggnog-mapper\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"228\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">228\u3000Foldseek<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u7ed3\u6784\u5b57\u6bcd\u8868\u5feb\u901f\u641c\u7d22\u548c\u805a\u7c7b\u86cb\u767d\u8d28\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5728\u5927\u578b\u7ed3\u6784\u5e93\u4e2d\u521d\u7b5b\u51fa\u5e8f\u5217\u76f8\u4f3c\u6027\u8f83\u5f31\u7684\u5019\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8f93\u5165\u6a21\u578b\u8d28\u91cf\u5f71\u54cd\u7ed3\u6784\u547d\u4e2d\uff0c\u5c40\u90e8\u76f8\u4f3c\u4e0d\u7b49\u4e8e\u529f\u80fd\u76f8\u540c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5e93\u76d8\u3002\u5927\u7ed3\u6784\u5e93\u53cd\u590d\u641c\u7d22\uff0cGPU \u652f\u6301\u9700\u770b\u7248\u672c\u53ca\u6a21\u5f0f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/steineggerlab\/foldseek\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"229\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">229\u3000CD-HIT<\/h3>\n<p style=\"margin:3px 0\">\u6309\u5e8f\u5217\u76f8\u4f3c\u5ea6\u805a\u7c7b\u5e76\u751f\u6210\u975e\u5197\u4f59\u4ee3\u8868\u96c6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u9002\u5408\u5728\u6ce8\u91ca\u6216\u641c\u7d22\u524d\u538b\u7f29\u5197\u4f59\uff0c\u547d\u4ee4\u884c\u6d41\u7a0b\u7b80\u5355<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8d2a\u5fc3\u4ee3\u8868\u53ca\u76f8\u4f3c\u5ea6\u9608\u503c\u4f1a\u5f71\u54cd\u7c07\u8fb9\u754c\uff0c\u8fdc\u7f18\u5e8f\u5217\u805a\u7c7b\u6709\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u6d77\u91cf ORF \u6216\u5b8f\u57fa\u56e0\u76ee\u5f55\u53bb\u5197\u4f59<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/weizhongli\/cdhit\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"230\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">230\u3000AlphaFold 2<\/h3>\n<p style=\"margin:3px 0\">\u9884\u6d4b\u86cb\u767d\u5355\u4f53\u53ca Multimer \u6a21\u5f0f\u4e0b\u7684\u86cb\u767d\u590d\u5408\u7269\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u751f\u6001\u6210\u719f\uff0c\u53ef\u590d\u7528\u6a21\u677f\u3001MSA \u548c\u65e2\u6709\u86cb\u767d\u9879\u76ee\u53c2\u6570<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u672c\u5730\u641c\u7d22\u9700\u51c6\u5907\u6570\u636e\u5e93\uff0c\u591a\u805a\u4f53\u754c\u9762\u4ecd\u9700\u68c0\u67e5\u7f6e\u4fe1\u5ea6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u63a8\u65ad\u3001CPU \u641c\u7d22\u3001\u5e93\u76d8\u3002\u5e8f\u5217\u957f\u5ea6\u3001\u91cd\u590d\u6570\u53ca MSA \u7f13\u5b58<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/google-deepmind\/alphafold\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"231\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">231\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/alphafold3-protein-interface-chain-pair-iptm-pae\/\">AlphaFold 3<\/a><\/h3>\n<p style=\"margin:3px 0\">\u9884\u6d4b\u86cb\u767d\u3001\u6838\u9178\u548c\u914d\u4f53\u7b49\u751f\u7269\u5206\u5b50\u590d\u5408\u7269\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u540c\u4e00\u6846\u67b6\u5efa\u6a21\u591a\u79cd\u7ec4\u5206\uff0c\u5e76\u8f93\u51fa\u5c40\u90e8\u4e0e\u754c\u9762\u7f6e\u4fe1\u4fe1\u606f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u957f\u590d\u5408\u7269\u53d7\u663e\u5b58\u7ea6\u675f\uff0c\u7b2c\u4e09\u65b9\u90e8\u7f72\u53ca\u6a21\u578b\u53c2\u6570\u4f7f\u7528\u9700\u6838\u5bf9\u5b98\u65b9\u6761\u6b3e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u663e\u5b58\u3001CPU \u641c\u7d22\u3001\u6570\u636e\u5e93\u76d8\u3002\u6309 token \u6570\u53ca\u91c7\u6837\u6b21\u6570\u8bd5\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/google-deepmind\/alphafold3\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"232\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">232\u3000ColabFold<\/h3>\n<p style=\"margin:3px 0\">\u7528 MMseqs2 \u751f\u6210 MSA \u5e76\u6279\u91cf\u9884\u6d4b\u86cb\u767d\u6216\u590d\u5408\u7269\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u672c\u5730\u6279\u5904\u7406\u53ef\u590d\u7528 MSA\uff0c\u4fbf\u4e8e\u591a\u5e8f\u5217\u3001\u591a\u79cd\u5b50\u7b5b\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u516c\u5171 MSA \u670d\u52a1\u6709\u4f7f\u7528\u9650\u5236\uff0c\u5927\u89c4\u6a21\u672c\u5730\u641c\u7d22\u9700\u8981\u90e8\u7f72\u53c2\u8003\u5e93<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001CPU\u3001\u5e93\u76d8\u3002\u5148\u5206\u6e05\u4f7f\u7528\u516c\u5171 MSA \u8fd8\u662f\u81ea\u5efa\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/sokrypton\/ColabFold\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"233\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">233\u3000OpenFold<\/h3>\n<p style=\"margin:3px 0\">\u7528 PyTorch \u8bad\u7ec3\u6216\u8fd0\u884c\u57fa\u4e8e AlphaFold 2 \u67b6\u6784\u7684\u86cb\u767d\u7ed3\u6784\u6a21\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u63a7\u5236\u8bad\u7ec3\u3001\u5fae\u8c03\u548c\u63a8\u65ad\u8fc7\u7a0b\uff0c\u9002\u5408\u65b9\u6cd5\u7814\u53d1<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5b8c\u6574\u8bad\u7ec3\u8981\u51c6\u5907\u5927\u89c4\u6a21\u7279\u5f81\u3001\u6a21\u677f\u548c\u8ba1\u7b97\u73af\u5883<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3001\u8bad\u7ec3\u6570\u636e\u76d8\u3002\u6a21\u578b\u8bad\u7ec3\u4e0e\u5355\u6b21\u63a8\u65ad\u5206\u522b\u4f30\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/aqlaboratory\/openfold\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"234\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">234\u3000ESMFold<\/h3>\n<p style=\"margin:3px 0\">\u76f4\u63a5\u4ece\u86cb\u767d\u5e8f\u5217\u7528\u8bed\u8a00\u6a21\u578b\u9884\u6d4b\u7ed3\u6784\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u63a8\u65ad\u53ef\u8df3\u8fc7 MSA \u6570\u636e\u5e93\u68c0\u7d22\uff0c\u9002\u5408\u5927\u6279\u5355\u5e8f\u5217\u521d\u7b5b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u539f\u59cb ESM \u4ed3\u5e93\u5df2\u5f52\u6863\uff0c\u957f\u94fe\u663e\u5b58\u548c\u6a21\u578b\u7f6e\u4fe1\u5ea6\u9700\u8bc4\u4f30<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3002\u6279\u91cf\u86cb\u767d\u7ec4\u6309\u957f\u5ea6\u5206\u6876\uff0c\u957f\u94fe\u5355\u72ec\u8bd5\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/facebookresearch\/esm\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"235\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">235\u3000Boltz<\/h3>\n<p style=\"margin:3px 0\">\u9884\u6d4b\u751f\u7269\u5206\u5b50\u590d\u5408\u7269\u7ed3\u6784\uff0c\u652f\u6301\u76f8\u5e94\u6a21\u578b\u7684\u4eb2\u548c\u529b\u9884\u6d4b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6279\u91cf\u5b9a\u4e49\u4e0d\u540c\u9776\u70b9\u548c\u914d\u4f53\uff0c\u8f93\u51fa\u7ed3\u6784\u53ca\u6a21\u578b\u8bc4\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4e0d\u540c\u7248\u672c\u548c\u4efb\u52a1\u7684\u5206\u6570\u542b\u4e49\u4e0d\u540c\uff0c\u4eb2\u548c\u529b\u9884\u6d4b\u9700\u5b9e\u9a8c\u6821\u9a8c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3002\u9776\u70b9\u2013\u914d\u4f53\u7ec4\u5408\u6570\u3001\u8f93\u5165\u957f\u5ea6\u53ca\u91c7\u6837\u6b21\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/jwohlwend\/boltz\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"236\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">236\u3000RFdiffusion<\/h3>\n<p style=\"margin:3px 0\">\u6309\u7ed3\u6784\u6216\u754c\u9762\u7ea6\u675f\u751f\u6210\u5019\u9009\u86cb\u767d\u9aa8\u67b6\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5bf9\u7ed9\u5b9a\u70ed\u70b9\u6216\u57fa\u5e8f\u8fdb\u884c\u6761\u4ef6\u751f\u6210\uff0c\u9002\u5408\u8bbe\u8ba1\u5019\u9009\u5e93<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u751f\u6210\u9aa8\u67b6\u8fd8\u9700\u5e8f\u5217\u8bbe\u8ba1\u3001\u7ed3\u6784\u590d\u6838\u548c\u5b9e\u9a8c\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3002\u9aa8\u67b6\u957f\u5ea6\u3001\u6269\u6563\u6b65\u6570\u4e0e\u6bcf\u4e2a\u4efb\u52a1\u91c7\u6837\u6570\u76f8\u4e58<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/RosettaCommons\/RFdiffusion\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"237\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">237\u3000ProteinMPNN<\/h3>\n<p style=\"margin:3px 0\">\u7ed9\u5b9a\u86cb\u767d\u9aa8\u67b6\u8bbe\u8ba1\u76f8\u5bb9\u7684\u6c28\u57fa\u9178\u5e8f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5e8f\u5217\u751f\u6210\u8f83\u5feb\uff0c\u9002\u5408\u56fa\u5b9a\u90e8\u5206\u6b8b\u57fa\u5e76\u6279\u91cf\u91c7\u6837<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u8f93\u5165\u9aa8\u67b6\u8d28\u91cf\uff0c\u5f97\u5206\u4e0d\u80fd\u8bc1\u660e\u53ef\u6298\u53e0\u6027\u6216\u529f\u80fd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u6216 GPU\u3002\u5355\u9aa8\u67b6\u8f83\u8f7b\uff0c\u5927\u9aa8\u67b6\u5e93\u4e0e\u7ed3\u6784\u56de\u9a8c\u51b3\u5b9a\u603b\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/dauparas\/ProteinMPNN\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"238\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">238\u3000Rosetta<\/h3>\n<p style=\"margin:3px 0\">\u505a\u7ed3\u6784\u5efa\u6a21\u3001\u754c\u9762\u8bbe\u8ba1\u3001\u677e\u5f1b\u53ca\u80fd\u91cf\u8bc4\u4f30\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6309\u7814\u7a76\u95ee\u9898\u7ec4\u5408\u534f\u8bae\u548c\u7ea6\u675f\uff0c\u9002\u5408\u5927\u89c4\u6a21\u72ec\u7acb\u91c7\u6837<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u6570\u4e0e\u6253\u5206\u51fd\u6570\u9700\u8981\u7ecf\u9a8c\uff0c\u4e0d\u540c\u534f\u8bae\u8017\u65f6\u5dee\u5f02\u5927<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u4ee5 CPU \u4e3a\u4e3b\u3002\u5019\u9009\u7ed3\u6784\u6570\u3001\u72ec\u7acb\u8f68\u8ff9\u548c\u677e\u5f1b\u8f6e\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/docs.rosettacommons.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"239\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">239\u3000SignalP 6.0<\/h3>\n<p style=\"margin:3px 0\">\u9884\u6d4b\u86cb\u767d\u4fe1\u53f7\u80bd\u7c7b\u578b\u548c\u5207\u5272\u4f4d\u70b9\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u4e00\u6b21\u7b5b\u67e5\u6574\u5957\u86cb\u767d\u7ec4\u5e76\u7ed9\u51fa\u4f4d\u70b9\u7ea7\u9884\u6d4b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7269\u79cd\u3001\u4fe1\u53f7\u7c7b\u578b\u53ca N \u7aef\u6ce8\u91ca\u8d28\u91cf\u5f71\u54cd\u89e3\u91ca\uff0c\u672c\u5730\u4f7f\u7528\u6709\u8bb8\u53ef\u6761\u6b3e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u6216 GPU\u3002\u5355\u6761\u8f7b\u91cf\uff0c\u5927\u89c4\u6a21\u86cb\u767d\u5e93\u53ca\u9ad8\u7cbe\u5ea6\u6a21\u5f0f\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/services.healthtech.dtu.dk\/services\/SignalP-6.0\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"240\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">240\u3000FoldX<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u4e09\u7ef4\u7ed3\u6784\u4f30\u8ba1\u7a81\u53d8\u5bf9\u7a33\u5b9a\u6027\u6216\u7ed3\u5408\u7684\u5f71\u54cd\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fbf\u4e8e\u56f4\u7ed5\u5df2\u77e5\u7ed3\u6784\u505a\u7a81\u53d8\u626b\u63cf\u5e76\u6392\u5e8f\u5019\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u6784\u4fee\u590d\u3001\u8d28\u5b50\u5316\u53ca\u7ecf\u9a8c\u529b\u573a\u4f1a\u5f71\u54cd\u80fd\u91cf\u4f30\u8ba1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u591a\u7ed3\u6784\u3001\u9971\u548c\u7a81\u53d8\u53ca\u591a\u6b21\u91cd\u590d\u8ba1\u7b97\u53ef\u5e76\u884c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/foldxsuite.crg.eu\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-13\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u5206\u5b50\u52a8\u529b\u5b66\u3001\u5206\u5b50\u5bf9\u63a5\u4e0e\u51b7\u51bb\u7535\u955c\uff08241\u2013260\uff09<\/summary>\n<p>\u6a21\u62df\u4e0e\u5bf9\u63a5\u90fd\u5e94\u80fd\u56de\u5230\u8f93\u5165\u6784\u8c61\u548c\u53c2\u6570\u3002\u5206\u5b50\u52a8\u529b\u5b66\u68c0\u67e5\u5e73\u8861\u7a97\u53e3\u3001\u65f6\u95f4\u6b65\u957f\u548c\u72ec\u7acb\u91cd\u590d\u3002\u5206\u5b50\u5bf9\u63a5\u68c0\u67e5\u591a\u4e2a\u6784\u8c61\u53ca\u641c\u7d22\u7a33\u5b9a\u6027\u3002\u51b7\u51bb\u7535\u955c\u91cd\u5efa\u5219\u8981\u8ffd\u8e2a\u7c92\u5b50\u7b5b\u9009\u3001\u59ff\u6001\u4e0e\u72ec\u7acb\u534a\u56fe\u9a8c\u8bc1\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"241\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">241\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/gromacs-water-box-temperature-windows-equilibration\/\">GROMACS<\/a><\/h3>\n<p style=\"margin:3px 0\">\u8fd0\u884c\u751f\u7269\u5927\u5206\u5b50\u7684\u7ecf\u5178\u5206\u5b50\u52a8\u529b\u5b66\u6a21\u62df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u77ed\u7a0b\u529b\u3001\u957f\u7a0b\u9759\u7535\u7b49\u53ef\u6309\u914d\u7f6e\u5206\u914d\u7ed9 CPU \u6216 GPU\uff0c\u4fbf\u4e8e\u5b9e\u6d4b\u8c03\u4f18<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5c0f\u4f53\u7cfb\u4e0a\u589e\u52a0 GPU \u6216\u8282\u70b9\u53ef\u80fd\u53d7\u901a\u4fe1\u9650\u5236\uff0c\u529b\u573a\u548c\u91c7\u6837\u4ecd\u9700\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001CPU\u3001\u8f68\u8ff9\u76d8\u3002\u6309\u4f53\u7cfb\u539f\u5b50\u6570\u3001\u6a21\u62df\u957f\u5ea6\u3001\u72ec\u7acb\u91cd\u590d\u6d4b ns\/\u5929<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/manual.gromacs.org\/documentation\/current\/user-guide\/mdrun-performance.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"242\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">242\u3000AMBER\uff08\u542b AmberTools\uff09<\/h3>\n<p style=\"margin:3px 0\">\u6784\u5efa\u529b\u573a\u4f53\u7cfb\u5e76\u8fd0\u884c\u751f\u7269\u5927\u5206\u5b50\u52a8\u529b\u5b66\u6216\u81ea\u7531\u80fd\u8ba1\u7b97\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u751f\u7269\u5206\u5b50\u529b\u573a\u4e0e\u5206\u6790\u5de5\u5177\u914d\u5957\uff0c\u53ef\u7528\u76f8\u5e94\u5f15\u64ce\u505a GPU \u6a21\u62df<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000AmberTools \u4e0e\u5b8c\u6574\u5957\u4ef6\u7684\u53ef\u7528\u5f15\u64ce\u3001\u6784\u5efa\u548c\u6388\u6743\u8981\u5206\u522b\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u6216 CPU\u3001\u8f68\u8ff9\u76d8\u3002\u591a\u4e2a\u81ea\u7531\u80fd\u7a97\u53e3\u3001\u914d\u4f53\u4f53\u7cfb\u548c\u91cd\u590d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/ambermd.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"243\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">243\u3000NAMD<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5927\u578b\u751f\u7269\u5206\u5b50\u4f53\u7cfb\u8fd0\u884c\u5e76\u884c\u5206\u5b50\u52a8\u529b\u5b66\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u591a\u8282\u70b9\u53ca GPU \u8fd0\u884c\uff0c\u9002\u5408\u5927\u578b\u86cb\u767d\u548c\u819c\u7cfb\u7edf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8de8\u8282\u70b9\u6548\u7387\u53d7\u4f53\u7cfb\u5927\u5c0f\u3001\u7f51\u7edc\u548c GPU \u8fd0\u884c\u6a21\u5f0f\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001CPU\u3001\u8282\u70b9\u4e92\u8054\u3002\u5927\u4f53\u7cfb\u3001\u591a\u526f\u672c\u548c\u957f\u65f6\u95f4\u8f68\u8ff9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC7395834\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"244\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">244\u3000OpenMM<\/h3>\n<p style=\"margin:3px 0\">\u7528 Python \u642d\u5efa\u5e76\u8fd0\u884c\u53ef\u5b9a\u5236\u5206\u5b50\u6a21\u62df\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5199\u81ea\u5b9a\u4e49\u529b\u5e76\u5207\u6362\u8ba1\u7b97\u5e73\u53f0\uff0c\u9002\u5408\u65b0\u65b9\u6cd5\u548c\u6279\u91cf\u7814\u7a76<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7075\u6d3b\u5efa\u6a21\u8981\u6c42\u4ed4\u7ec6\u6838\u5bf9\u5355\u4f4d\u3001\u4f53\u7cfb\u3001\u7cbe\u5ea6\u548c\u529b\u573a\u5b9e\u73b0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3001\u8f68\u8ff9\u76d8\u3002\u914d\u4f53\u6279\u6b21\u548c\u591a\u7a97\u53e3\u81ea\u7531\u80fd\u6a21\u62df<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/openmm.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"245\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">245\u3000CHARMM<\/h3>\n<p style=\"margin:3px 0\">\u5f00\u5c55\u5927\u5206\u5b50\u5efa\u6a21\u3001\u80fd\u91cf\u8ba1\u7b97\u53ca\u5206\u5b50\u52a8\u529b\u5b66\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u529b\u573a\u4e0e\u6a21\u62df\u534f\u8bae\u4e30\u5bcc\uff0c\u9002\u5408\u5ef6\u7eed\u6210\u719f\u5b9e\u9a8c\u548c\u53c2\u6570\u4f53\u7cfb<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u811a\u672c\u4e0e\u53c2\u6570\u5b66\u4e60\u6210\u672c\u9ad8\uff0c\u786c\u4ef6\u52a0\u901f\u53d6\u51b3\u4e8e\u5b9e\u9645\u5f15\u64ce\u548c\u6784\u5efa<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u6216 GPU\u3001\u8f68\u8ff9\u76d8\u3002\u957f\u65f6\u7a0b\u53ca\u591a\u53c2\u6570\u626b\u63cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/academiccharmm.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"246\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">246\u3000LAMMPS<\/h3>\n<p style=\"margin:3px 0\">\u6a21\u62df\u751f\u7269\u76f8\u5173\u8f6f\u7269\u8d28\u3001\u7c97\u7c92\u5316\u4f53\u7cfb\u53ca\u6750\u6599\u754c\u9762\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u52bf\u51fd\u6570\u4e0e\u5e76\u884c\u540e\u7aef\u591a\uff0c\u9002\u5408\u5927\u7c92\u5b50\u6570\u548c\u5b9a\u5236\u76f8\u4e92\u4f5c\u7528<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8981\u81ea\u9009\u5408\u9002\u52bf\u51fd\u6570\uff0cGPU \u52a0\u901f\u4ec5\u8986\u76d6\u652f\u6301\u7684\u8ba1\u7b97\u6837\u5f0f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u6216 GPU\u3001\u4e92\u8054\u3002\u7c92\u5b50\u6570\u3001\u6b65\u6570\u548c\u5e76\u884c\u5212\u5206\u51b3\u5b9a\u8d1f\u8f7d<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.lammps.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"247\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">247\u3000PLUMED<\/h3>\n<p style=\"margin:3px 0\">\u4e3a\u5206\u5b50\u52a8\u529b\u5b66\u5f15\u64ce\u589e\u52a0\u96c6\u4f53\u53d8\u91cf\u3001\u504f\u7f6e\u4e0e\u589e\u5f3a\u91c7\u6837\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8de8\u5f15\u64ce\u590d\u7528\u504f\u7f6e\u65b9\u6848\uff0c\u4fbf\u4e8e\u7814\u7a76\u7a00\u6709\u6784\u8c61\u8f6c\u53d8<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u5bbf\u4e3b\u5f15\u64ce\uff0c\u96c6\u4f53\u53d8\u91cf\u9009\u62e9\u9519\u8bef\u4f1a\u4f7f\u957f\u65f6\u95f4\u91c7\u6837\u5931\u6548<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u8d44\u6e90\u8ddf\u968f\u5bbf\u4e3b\u5f15\u64ce\u3002\u591a\u526f\u672c\u3001\u591a\u4e2a\u7a97\u53e3\u53ca\u590d\u6742\u96c6\u4f53\u53d8\u91cf\u653e\u5927\u5f00\u9500<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.plumed.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"248\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">248\u3000<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/autodock-vina-seed-exhaustiveness-poses-1iep\/\">AutoDock Vina<\/a><\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5c0f\u5206\u5b50\u4e0e\u53d7\u4f53\u505a\u914d\u4f53\u6784\u8c61\u641c\u7d22\u548c\u6253\u5206\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u547d\u4ee4\u884c\u6613\u6279\u5904\u7406\uff0c\u53ef\u6309\u9776\u70b9\u6216\u5206\u5b50\u62c6\u6210\u72ec\u7acb\u4efb\u52a1<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53d7\u4f53\u67d4\u6027\u3001\u8d28\u5b50\u5316\u548c\u6253\u5206\u8fd1\u4f3c\u9650\u5236\u5bf9\u771f\u5b9e\u4eb2\u548c\u529b\u7684\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3002\u914d\u4f53\u6570\u91cf\u3001\u641c\u7d22\u5f3a\u5ea6\u53ca\u91cd\u590d\u5bf9\u63a5\u5171\u540c\u51b3\u5b9a\u6838\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/autodock-vina.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"249\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">249\u3000AutoDock-GPU<\/h3>\n<p style=\"margin:3px 0\">\u7528\u52a0\u901f\u8bbe\u5907\u6267\u884c AutoDock4 \u6253\u5206\u4f53\u7cfb\u7684\u5bf9\u63a5\u641c\u7d22\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6279\u5904\u7406\u591a\u4e2a\u914d\u4f53\uff0c\u9002\u5408\u590d\u7528\u540c\u4e00\u9776\u70b9\u7f51\u683c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u51c6\u5907\u5339\u914d\u7684\u7f51\u683c\u548c\u53c2\u6570\uff0c\u7ed3\u679c\u89e3\u91ca\u9075\u5faa\u5bf9\u5e94\u6253\u5206\u4f53\u7cfb<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u4e3b\u673a\u4f9b\u6570\u3002\u5927\u914d\u4f53\u5e93\u3001\u591a\u641c\u7d22\u8f6e\u6b21\u548c\u591a\u9776\u70b9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/forlilab\/AutoDock-GPU\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"250\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">250\u3000GNINA<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5377\u79ef\u795e\u7ecf\u7f51\u7edc\u4e3a\u5206\u5b50\u5bf9\u63a5\u59ff\u52bf\u6253\u5206\u6216\u91cd\u6392\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ed3\u5408\u7ecf\u5178\u641c\u7d22\u548c\u5b66\u4e60\u578b\u6253\u5206\uff0c\u9002\u5408\u591a\u7ea7\u865a\u62df\u7b5b\u9009<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8bad\u7ec3\u96c6\u504f\u5dee\u548c\u53d7\u4f53\u6784\u8c61\u5f71\u54cd\u6392\u540d\uff0c\u795e\u7ecf\u7f51\u7edc\u8bc4\u5206\u987b\u5916\u90e8\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU \u8bc4\u5206\u3001CPU \u641c\u7d22\u3002\u5206\u5b50\u6570\u3001\u59ff\u52bf\u6570\u53ca\u91cd\u6253\u5206\u6a21\u5f0f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/gnina\/gnina\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"251\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">251\u3000HADDOCK<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5b9e\u9a8c\u6216\u751f\u7269\u5b66\u7ea6\u675f\u9a71\u52a8\u86cb\u767d\u7b49\u5206\u5b50\u7684\u5bf9\u63a5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u663e\u5f0f\u7eb3\u5165\u754c\u9762\u4fe1\u606f\u5e76\u5bf9\u5019\u9009\u7ed3\u6784\u805a\u7c7b\u548c\u7cbe\u4fee<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ea6\u675f\u4e0d\u51c6\u786e\u4f1a\u5f15\u5bfc\u9519\u8bef\u6784\u8c61\uff0c\u5c40\u90e8\u67d4\u6027\u4e0e\u91c7\u6837\u8986\u76d6\u6709\u9650<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u4e34\u65f6\u76d8\u3002\u6a21\u578b\u6570\u3001\u67d4\u6027\u7cbe\u4fee\u53ca\u7ea6\u675f\u7ec4\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.bonvinlab.org\/software\/haddock3\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"252\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">252\u3000Glide<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5546\u4e1a\u8f6f\u4ef6\u8fdb\u884c\u5c0f\u5206\u5b50\u5bf9\u63a5\u548c\u5206\u7ea7\u865a\u62df\u7b5b\u9009\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6709\u591a\u6863\u7b5b\u9009\u7cbe\u5ea6\uff0c\u4fbf\u4e8e\u6309\u6279\u6b21\u7f29\u5c0f\u5019\u9009\u5e93<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90e8\u7f72\u548c\u5e76\u53d1\u53d7\u8bb8\u53ef\u7ea6\u675f\uff0c\u7ed3\u6784\u51c6\u5907\u548c\u8d28\u5b50\u5316\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u7b49\u8d44\u6e90\u4f9d\u5b9e\u9645\u6a21\u5757\u3002\u5148\u6838\u5bf9\u6388\u6743\u5e76\u53d1\u3001\u914d\u4f53\u5e93\u548c\u9776\u70b9\u6570<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.schrodinger.com\/platform\/products\/glide\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"253\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">253\u3000RELION<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u51b7\u51bb\u7535\u955c\u9897\u7c92\u505a\u4e8c\u7ef4\u3001\u4e09\u7ef4\u5206\u7c7b\u4e0e\u7cbe\u4fee\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4ee5\u7edf\u8ba1\u6a21\u578b\u8fdb\u884c\u91cd\u6784\uff0c\u6d41\u7a0b\u80fd\u4fdd\u7559\u5404\u8f6e\u5206\u7c7b\u4e0e\u7cbe\u4fee\u8bb0\u5f55<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9897\u7c92\u8d28\u91cf\u4e0e\u521d\u59cb\u6a21\u578b\u4f1a\u9650\u5236\u91cd\u6784\uff0c\u53cd\u590d\u5206\u7c7b\u5f88\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001CPU\u3001\u5185\u5b58\u3001\u5feb\u901f\u76d8\u3002\u9897\u7c92\u6570\u3001\u76d2\u5c3a\u5bf8\u4e0e\u5206\u7c7b\u8f6e\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/relion.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"254\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">254\u3000CryoSPARC<\/h3>\n<p style=\"margin:3px 0\">\u4ea4\u4e92\u8fd0\u884c\u5355\u9897\u7c92\u51b7\u51bb\u7535\u955c\u91cd\u6784\u4e0e\u5f02\u8d28\u6027\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5de5\u4f5c\u8005\u8282\u70b9\u53ef\u6269\u5c55\uff0c\u4fbf\u4e8e\u5bf9\u540c\u4e00\u9897\u7c92\u96c6\u6bd4\u8f83\u591a\u8f6e\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u591a\u7c7b\u4f5c\u4e1a\u9700\u8981\u517c\u5bb9\u7684 NVIDIA GPU\uff0c\u7f13\u5b58\u5e03\u5c40\u53ca\u8f6f\u4ef6\u6388\u6743\u5f71\u54cd\u90e8\u7f72<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3001\u672c\u5730 SSD\u3002\u9ad8\u5206\u8fa8\u7387\u5927\u9897\u7c92\u96c6\u4e0e\u591a\u7528\u6237\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/guide.cryosparc.com\/setup-configuration-and-management\/hardware-and-system-requirements\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"255\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">255\u3000MotionCor3<\/h3>\n<p style=\"margin:3px 0\">\u6821\u6b63\u51b7\u51bb\u7535\u955c\u7535\u5f71\u5e27\u7684\u675f\u81f4\u8fd0\u52a8\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u91c7\u96c6\u540e\u6279\u91cf\u5b8c\u6210\u8fd0\u52a8\u6821\u6b63\uff0c\u670d\u52a1\u4e0b\u6e38\u91cd\u6784<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6f02\u79fb\u8fc7\u5927\u6216\u56fe\u50cf\u4fe1\u566a\u6bd4\u592a\u4f4e\u65f6\uff0c\u5c40\u90e8\u8fd0\u52a8\u96be\u53ef\u9760\u4f30\u8ba1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u7535\u5f71\u5e27\u8bfb\u5199\u3002\u6301\u7eed\u91c7\u96c6\u7684\u8f93\u5165\u901f\u5ea6\u51b3\u5b9a\u6240\u9700\u541e\u5410<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/czimaginginstitute\/MotionCor3\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"256\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">256\u3000CTFFIND<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u7535\u955c\u56fe\u50cf\u4f30\u8ba1\u886c\u5ea6\u4f20\u9012\u51fd\u6570\u53c2\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u9010\u5f20\u663e\u5fae\u56fe\u8d28\u63a7\uff0c\u5e2e\u52a9\u5224\u65ad\u79bb\u7126\u548c\u50cf\u6563<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u566a\u58f0\u3001\u539a\u51b0\u548c\u5f02\u5e38\u56fe\u50cf\u4f1a\u5e72\u6270\u62df\u5408\uff0c\u5f02\u5e38\u7ed3\u679c\u9700\u76ee\u68c0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u56fe\u50cf\u8bfb\u5199\u3002\u5355\u5f20\u8f83\u8f7b\uff0c\u6574\u6279\u663e\u5fae\u56fe\u8fdb\u5165\u8fde\u7eed\u5904\u7406\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC11661789\/\">\u539f\u59cb\u8bba\u6587<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"257\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">257\u3000cryoDRGN<\/h3>\n<p style=\"margin:3px 0\">\u7528\u795e\u7ecf\u7f51\u7edc\u91cd\u6784\u51b7\u51bb\u7535\u955c\u9897\u7c92\u7684\u8fde\u7eed\u6784\u8c61\u53d8\u5316\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6f5c\u5728\u7a7a\u95f4\u53ef\u63a2\u7d22\u4f20\u7edf\u79bb\u6563\u5206\u7c7b\u96be\u5206\u5f00\u7684\u7ed3\u6784\u5f02\u8d28\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u9897\u7c92\u5bf9\u9f50\u548c\u8bad\u7ec3\u8d28\u91cf\uff0c\u6f5c\u5728\u53d8\u5316\u9700\u4e0e\u7ed3\u6784\u8bc1\u636e\u4ea4\u53c9\u68c0\u67e5<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000GPU\u3001\u663e\u5b58\u3001\u9897\u7c92\u76d8\u3002\u5927\u6570\u636e\u8bad\u7ec3\u3001\u591a\u4e2a\u968f\u673a\u79cd\u5b50\u4e0e\u9a8c\u8bc1\u91cd\u8bad<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ml-struct-bio\/cryodrgn\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"258\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">258\u3000EMAN2<\/h3>\n<p style=\"margin:3px 0\">\u5f00\u5c55\u5355\u9897\u7c92\u5206\u6790\u3001\u4e09\u7ef4\u91cd\u6784\u548c\u7535\u5b50\u65ad\u5c42\u5206\u6790\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5de5\u5177\u8986\u76d6\u591a\u7c7b\u7535\u955c\u6570\u636e\uff0c\u9002\u5408\u5b9a\u5236\u5904\u7406\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6a21\u5757\u548c\u53c2\u6570\u591a\uff0c\u4e0d\u540c\u91cd\u6784\u8def\u7ebf\u9700\u5206\u522b\u8bc4\u4f30\u7cbe\u5ea6\u4e0e\u8d44\u6e90<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u78c1\u76d8\u3002\u4e09\u7ef4\u4f53\u79ef\u3001\u9897\u7c92\u6570\u548c\u91cd\u590d\u91cd\u6784<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/blake.bcm.edu\/emanwiki\/EMAN2\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"259\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">259\u3000IMOD<\/h3>\n<p style=\"margin:3px 0\">\u8fdb\u884c\u7535\u5b50\u65ad\u5c42\u5e8f\u5217\u5bf9\u9f50\u3001\u4f53\u91cd\u6784\u548c\u7ed3\u6784\u5efa\u6a21\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u5bf9\u9f50\u68c0\u67e5\u3001\u91cd\u5efa\u4e0e\u4eba\u5de5\u6a21\u578b\u7f16\u8f91\u653e\u5728\u540c\u5957\u5de5\u5177\u4e2d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u503e\u8f6c\u8986\u76d6\u4e0e\u5bf9\u9f50\u8bef\u5dee\u9650\u5236\u4e09\u7ef4\u89e3\u91ca\uff0c\u4eba\u5de5\u73af\u8282\u96be\u6279\u91cf\u52a0\u901f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4f53\u6570\u636e\u76d8\uff0c\u90e8\u5206\u6b65\u9aa4\u53ef\u7528 GPU\u3002\u591a\u5957\u503e\u8f6c\u5e8f\u5217<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bio3d.colorado.edu\/imod\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"260\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">260\u3000cisTEM<\/h3>\n<p style=\"margin:3px 0\">\u8fdb\u884c\u5355\u9897\u7c92\u51b7\u51bb\u7535\u955c\u56fe\u50cf\u5904\u7406\u3001\u5206\u7c7b\u4e0e\u7cbe\u4fee\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5de5\u4f5c\u6d41\u9002\u5408\u591a\u6838 CPU\uff0c\u53ef\u5229\u7528\u73b0\u6709 CPU \u8282\u70b9<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5206\u8fa8\u7387\u4e09\u7ef4\u7cbe\u4fee\u4ecd\u9700\u5927\u91cf\u6838\u5fc3\u65f6\u95f4\u53ca\u9ad8\u901f\u9897\u7c92\u5b58\u50a8<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u78c1\u76d8\u3002\u9ad8\u9897\u7c92\u6570\u4e0e\u591a\u8f6e\u5206\u7c7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cistem.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-14\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u86cb\u767d\u8d28\u7ec4\u5b66\u3001\u4ee3\u8c22\u7ec4\u5b66\u4e0e\u8d28\u8c31\uff08261\u2013280\uff09<\/summary>\n<p>\u641c\u5e93\u9274\u5b9a\u3001\u8272\u8c31\u5b9a\u91cf\u548c\u4ee3\u8c22\u7269\u6ce8\u91ca\u6240\u4f9d\u8d56\u7684\u8bc1\u636e\u4e0d\u540c\u3002\u5148\u8bb0\u5f55\u4eea\u5668\u91c7\u96c6\u65b9\u5f0f\u3001\u8d28\u91cf\u8bef\u5dee\u548c\u53c2\u8003\u5e93\uff0c\u518d\u6838\u67e5\u5047\u53d1\u73b0\u7387\u7684\u7edf\u8ba1\u5c42\u7ea7\u3002\u53ea\u6709\u5cf0\u3001\u540c\u4f4d\u7d20\u6216\u788e\u7247\u7684\u652f\u6301\uff0c\u672a\u5fc5\u8db3\u4ee5\u533a\u5206\u7ed3\u6784\u76f8\u8fd1\u7684\u4ee3\u8c22\u7269\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"261\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">261\u3000MaxQuant<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u8d28\u8c31\u539f\u59cb\u6587\u4ef6\u641c\u7d22\u80bd\u6bb5\u3001\u9274\u5b9a\u86cb\u767d\u5e76\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u5c06\u641c\u7d22\u3001\u4fee\u9970\u548c\u8de8\u8fd0\u884c\u5b9a\u91cf\u4e32\u6210\u6d41\u7a0b\uff0c\u9002\u5408\u56fa\u5b9a\u5b9e\u9a8c\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53ef\u53d8\u4fee\u9970\u3001\u5339\u914d\u7b56\u7565\u548c\u641c\u7d22\u7a7a\u95f4\u4f1a\u540c\u65f6\u5f71\u54cd\u8017\u65f6\u4e0e\u9519\u8bef\u7387<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u91cf\u539f\u59cb\u6587\u4ef6\u53ca\u591a\u4fee\u9970\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/maxquant.org\/maxquant\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"262\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">262\u3000DIA-NN<\/h3>\n<p style=\"margin:3px 0\">\u5bf9 DIA \u86cb\u767d\u8d28\u7ec4\u505a\u80bd\u6bb5\u8bc6\u522b\u4e0e\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u8c31\u5e93\u53ca\u76f8\u5e94\u7684\u65e0\u5b9e\u9a8c\u8c31\u5e93\u6d41\u7a0b\uff0c\u9002\u5408\u6279\u6b21\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9884\u6d4b\u5e93\u3001\u91c7\u96c6\u7a97\u53e3\u548c\u9608\u503c\u4f1a\u5f71\u54cd\u9274\u5b9a\uff0c\u90e8\u7f72\u9700\u533a\u5206\u8f6f\u4ef6\u7248\u672c\u4e0e\u8bb8\u53ef<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u5feb\u901f\u76d8\u3002\u591a\u6b21\u8fdb\u6837\u3001\u5927\u8c31\u5e93\u548c\u8de8\u6279\u91cd\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/vdemichev\/DiaNN\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"263\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">263\u3000FragPipe\uff08\u542b MSFragger\uff09<\/h3>\n<p style=\"margin:3px 0\">\u7f16\u6392\u5e38\u89c4\u6216\u5f00\u653e\u4fee\u9970\u641c\u7d22\u3001\u9a8c\u8bc1\u4e0e\u86cb\u767d\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000MSFragger \u7d22\u5f15\u641c\u7d22\u9002\u5408\u4ece\u5927\u91cf\u8c31\u56fe\u7b5b\u9009\u5019\u9009\u4fee\u9970<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5de5\u4f5c\u6d41\u7ec4\u4ef6\u5404\u6709\u8f93\u5165\u548c\u8bb8\u53ef\u8981\u6c42\uff0c\u5f00\u653e\u641c\u7d22\u7ed3\u679c\u9700\u6821\u51c6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5f00\u653e\u641c\u7d22\u3001\u5927 FASTA \u548c\u591a\u6279\u539f\u59cb\u6587\u4ef6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/fragpipe.nesvilab.org\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"264\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">264\u3000OpenMS\uff08\u542b OpenSWATH\uff09<\/h3>\n<p style=\"margin:3px 0\">\u642d\u5efa LC-MS \u7279\u5f81\u68c0\u6d4b\u3001\u5b9a\u91cf\u53ca\u9776\u5411 DIA \u63d0\u53d6\u6d41\u7a0b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ec4\u5408\u591a\u4e2a\u547d\u4ee4\u884c\u6a21\u5757\uff0c\u5f00\u653e\u683c\u5f0f\u4fbf\u4e8e\u8854\u63a5\u7279\u5f81\u68c0\u6d4b\u4e0e\u5b9a\u91cf<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53c2\u6570\u548c\u6570\u636e\u8f6c\u6362\u6b65\u9aa4\u8f83\u591a\uff0c\u6d41\u7a0b\u9700\u7528\u5df2\u77e5\u6837\u672c\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001mzML \u8bfb\u5199\u3002\u5927\u6279\u6b21\u7279\u5f81\u63d0\u53d6\u548c\u591a\u6587\u4ef6\u5408\u5e76<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/openms.de\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"265\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">265\u3000Proteome Discoverer<\/h3>\n<p style=\"margin:3px 0\">\u5728\u5546\u4e1a\u8282\u70b9\u5f0f\u6d41\u7a0b\u4e2d\u5b8c\u6210\u8d28\u8c31\u9274\u5b9a\u548c\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u628a\u641c\u7d22\u5f15\u64ce\u3001\u9a8c\u8bc1\u548c\u5b9a\u91cf\u8282\u70b9\u7ec4\u6210\u53ef\u89c6\u5316\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5bbf\u4e3b\u7cfb\u7edf\u3001\u5f15\u64ce\u53ca\u6388\u6743\u6761\u4ef6\u7ea6\u675f\u53ef\u7528\u8282\u70b9\u548c\u5e76\u53d1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u539f\u59cb\u6587\u4ef6\u76d8\u3002\u5148\u786e\u8ba4\u5141\u8bb8\u90e8\u7f72\u7684\u73af\u5883\u53ca\u9879\u76ee\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/industrial\/mass-spectrometry\/liquid-chromatography-mass-spectrometry-lc-ms\/lc-ms-software\/multi-omics-data-analysis\/proteome-discoverer-software.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"266\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">266\u3000Spectronaut<\/h3>\n<p style=\"margin:3px 0\">\u6279\u91cf\u5206\u6790\u548c\u5b9a\u91cf DIA \u86cb\u767d\u8d28\u7ec4\u6216\u4fee\u9970\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u628a\u5e93\u6784\u5efa\u3001\u9274\u5b9a\u548c\u8de8\u8fd0\u884c\u5b9a\u91cf\u6574\u5408\u5728\u5546\u4e1a\u73af\u5883\u4e2d<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u529f\u80fd\u3001\u64cd\u4f5c\u7cfb\u7edf\u548c\u5e76\u53d1\u8981\u6309\u6388\u6743\u7248\u672c\u786e\u8ba4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001SSD\u3002\u957f\u671f DIA \u961f\u5217\u3001\u539f\u59cb\u6587\u4ef6\u91cf\u548c\u5e93\u89c4\u6a21<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/biognosys.com\/software\/spectronaut\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"267\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">267\u3000Skyline<\/h3>\n<p style=\"margin:3px 0\">\u5efa\u7acb\u9776\u5411\u8d28\u8c31\u65b9\u6cd5\u5e76\u5ba1\u9605\u548c\u5b9a\u91cf\u8272\u8c31\u5cf0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4ea4\u4e92\u6838\u67e5\u5e72\u6270\u548c\u79ef\u5206\u8fb9\u754c\u65b9\u4fbf\uff0c\u53ef\u590d\u7528\u76ee\u6807\u65b9\u6cd5<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5c11\u91cf\u76ee\u6807\u7684\u4eba\u5de5\u5ba1\u9605\u8ba1\u7b97\u8f7b\uff0c\u4eba\u5de5\u5224\u8bfb\u96be\u9760\u52a0\u7b97\u529b\u63d0\u901f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u5185\u5b58\u3001\u539f\u59cb\u6587\u4ef6\u8bfb\u76d8\u3002\u5927\u91cf\u8272\u8c31\u56fe\u5bfc\u5165\u548c\u547d\u4ee4\u884c\u6279\u5904\u7406\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ProteoWizard\/pwiz\/tree\/master\/pwiz_tools\/Skyline\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"268\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">268\u3000Comet<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5e8f\u5217\u6570\u636e\u5e93\u641c\u7d22\u4e32\u8054\u8d28\u8c31\u4e2d\u7684\u80bd\u6bb5\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53c2\u6570\u900f\u660e\uff0c\u6210\u719f\u683c\u5f0f\u4fbf\u4e8e\u63a5\u4e0b\u6e38\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u53ef\u53d8\u4fee\u9970\u4e0e\u975e\u7279\u5f02\u9176\u5207\u4f1a\u4f7f\u5019\u9009\u6570\u5feb\u901f\u589e\u52a0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u6570\u636e\u5e93\u3001\u591a\u79cd\u53ef\u53d8\u4fee\u9970\u6216\u5927\u91cf\u8c31\u56fe<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/UWPR\/Comet\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"269\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">269\u3000MS-GF+<\/h3>\n<p style=\"margin:3px 0\">\u901a\u8fc7\u6982\u7387\u8bc4\u5206\u4ece\u4e32\u8054\u8d28\u8c31\u68c0\u7d22\u80bd\u8c31\u5339\u914d\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u63d0\u4f9b\u8c31\u7ea7\u663e\u8457\u6027\u4fe1\u606f\uff0c\u4fbf\u4e8e\u63a5\u9a8c\u8bc1\u548c\u8fc7\u6ee4\u6b65\u9aa4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6570\u636e\u5e93\u548c\u4fee\u9970\u914d\u7f6e\u5f71\u54cd\u641c\u7d22\u7a7a\u95f4\uff0cJava \u5185\u5b58\u9700\u5408\u7406\u5206\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u9ad8\u5206\u8fa8\u7387\u8c31\u56fe\u3001\u5bbd\u5bb9\u5dee\u548c\u591a\u4fee\u9970\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/MSGFPlus\/msgfplus\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"270\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">270\u3000Sage<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u5feb\u901f\u6570\u636e\u5e93\u641c\u7d22\u9274\u5b9a\u80bd\u6bb5\u5e76\u63d0\u4f9b\u5b9a\u91cf\u7ed3\u679c\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000Rust \u5b9e\u73b0\u9002\u5408\u6279\u91cf\u641c\u7d22\uff0c\u53ef\u590d\u7528\u540c\u4e00\u53c2\u6570\u914d\u7f6e<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8c31\u56fe\u683c\u5f0f\u3001\u9176\u5207\u548c\u4fee\u9970\u8bbe\u7f6e\u9700\u4e0e\u5b9e\u9a8c\u5339\u914d\uff0c\u9519\u8bef\u7387\u9700\u6309\u9879\u76ee\u590d\u6838<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3001\u8bfb\u76d8\u3002\u6574\u6279\u539f\u59cb\u8c31\u4e0e\u5bbd\u8303\u56f4\u641c\u7d22<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/lazear\/sage\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"271\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">271\u3000EncyclopeDIA<\/h3>\n<p style=\"margin:3px 0\">\u7528\u8272\u8c31\u6216\u5149\u8c31\u5e93\u5bf9 DIA \u6570\u636e\u505a\u80bd\u6bb5\u9274\u5b9a\u4e0e\u5b9a\u91cf\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5229\u7528\u7a84\u7a97\u5b9e\u9a8c\u5efa\u7acb\u7684\u8272\u8c31\u5e93\u63d0\u9ad8\u540e\u7eed\u67e5\u8be2\u9488\u5bf9\u6027<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5e93\u8d28\u91cf\u3001\u4fdd\u7559\u65f6\u95f4\u548c\u91c7\u96c6\u65b9\u6848\u5339\u914d\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u539f\u59cb\u6570\u636e\u76d8\u3002\u7a84\u7a97\u5efa\u5e93\u548c\u591a\u8fdb\u6837\u63d0\u53d6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.searlelab.org\/software\/encyclopedia\/index.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"272\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">272\u3000Percolator<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u534a\u76d1\u7763\u5b66\u4e60\u91cd\u6392\u80bd\u8c31\u5339\u914d\u5e76\u4f30\u8ba1\u9519\u8bef\u7387\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u5229\u7528\u591a\u79cd\u641c\u7d22\u7279\u5f81\uff0c\u63d0\u9ad8\u9ad8\u7f6e\u4fe1 PSM \u7684\u8fa8\u522b\u80fd\u529b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u5408\u7406\u7684\u76ee\u6807\u2013\u8bf1\u9975\u8bbe\u8ba1\u3001\u8db3\u591f\u6837\u672c\u548c\u5408\u9002\u7279\u5f81<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002PSM \u975e\u5e38\u591a\u6216\u53cd\u590d\u4ea4\u53c9\u9a8c\u8bc1\u624d\u660e\u663e\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/percolator\/percolator\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"273\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">273\u3000ProteoWizard\uff08\u542b msconvert\uff09<\/h3>\n<p style=\"margin:3px 0\">\u628a\u4eea\u5668\u539f\u59cb\u6587\u4ef6\u8f6c\u6362\u4e3a mzML \u7b49\u5f00\u653e\u683c\u5f0f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u517c\u5bb9\u591a\u79cd\u6765\u6e90\uff0c\u662f\u8854\u63a5\u5f00\u6e90\u8d28\u8c31\u6d41\u7a0b\u7684\u5e38\u7528\u5165\u53e3<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90e8\u5206\u4e13\u6709\u683c\u5f0f\u4f9d\u8d56\u5382\u5546\u5e93\u53ca\u652f\u6301\u5e73\u53f0\uff0c\u8d28\u5fc3\u5316\u8bbe\u7f6e\u8981\u8bb0\u5f55<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u8bfb\u5199\u541e\u5410\u3001\u78c1\u76d8\u5bb9\u91cf\u3001CPU\u3002\u5168\u961f\u5217\u8f6c\u6362\u548c\u4fdd\u5b58\u4e24\u5957\u683c\u5f0f<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/ProteoWizard\/pwiz\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"274\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">274\u3000XCMS<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u975e\u9776\u5411 LC-MS \u8fdb\u884c\u5cf0\u68c0\u6d4b\u3001\u5bf9\u9f50\u548c\u8de8\u6837\u672c\u7279\u5f81\u5339\u914d\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000R\/Bioconductor \u4e2d\u53ef\u8ffd\u8e2a\u5404\u9636\u6bb5\u5e76\u63a5\u7edf\u8ba1\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5cf0\u5bbd\u3001\u8d28\u91cf\u8bef\u5dee\u548c\u4fdd\u7559\u65f6\u95f4\u6821\u6b63\u53c2\u6570\u9700\u6309\u4eea\u5668\u4e0e\u6279\u6b21\u8c03\u6574<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u539f\u59cb\u6587\u4ef6\u76d8\u3002\u5927\u91cf\u8fdb\u6837\u91cd\u5bfb\u5cf0\u53ca\u8de8\u6279\u5bf9\u9f50<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/xcms.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"275\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">275\u3000MZmine<\/h3>\n<p style=\"margin:3px 0\">\u505a\u8d28\u8c31\u7279\u5f81\u68c0\u6d4b\u3001\u53bb\u5377\u79ef\u3001\u5bf9\u9f50\u4e0e\u5206\u5b50\u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u56fe\u5f62\u6d41\u7a0b\u53ef\u4fdd\u5b58\u4e3a\u6279\u5904\u7406\u914d\u7f6e\uff0c\u9002\u5408\u590d\u7528\u5df2\u4f18\u5316\u53c2\u6570<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9ad8\u5206\u8fa8\u7387\u5927\u6570\u636e\u6613\u5360\u5185\u5b58\uff0c\u8de8\u4eea\u5668\u53c2\u6570\u9700\u91cd\u8c03<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u5927\u961f\u5217\u7279\u5f81\u8868\u4e0e\u591a\u8f6e\u53c2\u6570\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/mzmine.github.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"276\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">276\u3000MS-DIAL<\/h3>\n<p style=\"margin:3px 0\">\u5904\u7406\u591a\u79cd\u91c7\u96c6\u6a21\u5f0f\u7684\u4ee3\u8c22\u7ec4\u6216\u8102\u8d28\u7ec4\u6570\u636e\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u96c6\u6210\u53bb\u5377\u79ef\u3001\u8c31\u5e93\u5339\u914d\u548c\u5bf9\u9f50\uff0c\u9002\u5408\u6807\u51c6\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u590d\u6742\u5171\u6d17\u8131\u3001\u540c\u5206\u5f02\u6784\u4f53\u53ca\u5e93\u8986\u76d6\u4f1a\u9650\u5236\u9274\u5b9a\u5c42\u7ea7<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u539f\u59cb\u6570\u636e\u76d8\u3002\u5927\u91cf\u8fdb\u6837\u4e0e\u591a\u65b9\u6cd5\u91cd\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/systemsomicslab.github.io\/compms\/msdial\/main.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"277\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">277\u3000SIRIUS<\/h3>\n<p style=\"margin:3px 0\">\u7528\u9ad8\u5206\u8fa8\u7387 MS\/MS \u63a8\u65ad\u5206\u5b50\u5f0f\uff0c\u5e76\u7ed3\u5408\u6a21\u5757\u6392\u5e8f\u7ed3\u6784\u5019\u9009\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u788e\u88c2\u6811\u3001\u540c\u4f4d\u7d20\u53ca\u7ed3\u6784\u8bc1\u636e\u53ef\u4e00\u8d77\u8f85\u52a9\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u90e8\u5206\u6a21\u5757\u4f9d\u8d56\u5728\u7ebf\u670d\u52a1\u548c\u8bb8\u53ef\uff0c\u5019\u9009\u6392\u540d\u4ecd\u9700\u6807\u51c6\u54c1\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u788e\u88c2\u6811\u5728\u672c\u5730\u8ba1\u7b97\uff0c\u5148\u786e\u8ba4\u5728\u7ebf\u548c\u672c\u5730\u4efb\u52a1\u8fb9\u754c<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/v6.docs.sirius-ms.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"278\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">278\u3000CAMERA<\/h3>\n<p style=\"margin:3px 0\">\u5bf9 XCMS \u7279\u5f81\u8868\u6ce8\u91ca\u540c\u4f4d\u7d20\u3001\u52a0\u5408\u7269\u548c\u76f8\u5173\u5cf0\u7ec4\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u4fbf\u4e8e\u5f52\u5e76\u540c\u4e00\u5316\u5408\u7269\u7684\u5019\u9009\u79bb\u5b50\uff0c\u8f85\u52a9\u89e3\u8bfb\u7279\u5f81\u8868<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u5171\u6d17\u8131\u6216\u5f3a\u76f8\u5173\u7684\u4e0d\u540c\u5316\u5408\u7269\u53ef\u80fd\u88ab\u9519\u8bef\u5f52\u6210\u4e00\u7ec4<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5e38\u89c4\u7279\u5f81\u8868\u8f83\u8f7b\uff0c\u66f4\u591a\u7528\u4e8e XCMS \u540e\u7eed\u89e3\u8bfb<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/CAMERA.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"279\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">279\u3000MetFrag<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u5c0f\u5206\u5b50\u5019\u9009\u505a\u8ba1\u7b97\u788e\u88c2\u5e76\u6309\u8c31\u56fe\u8bc1\u636e\u6392\u5e8f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u52a0\u5165\u6765\u6e90\u3001\u4fdd\u7559\u6027\u8d28\u7b49\u9644\u52a0\u8bc1\u636e\u7f29\u5c0f\u5019\u9009\u8303\u56f4<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u5019\u9009\u6570\u636e\u5e93\uff0c\u5f02\u6784\u4f53\u5e38\u9700\u6807\u51c6\u54c1\u6216\u5176\u4ed6\u5b9e\u9a8c\u533a\u5206<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5f85\u6ce8\u91ca\u8c31\u6570\u3001\u5019\u9009\u6570\u548c\u788e\u88c2\u6df1\u5ea6\u76f8\u4e58<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/ipb-halle.github.io\/MetFrag\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"280\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">280\u3000matchms<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u8d28\u8c31\u6570\u636e\u505a\u6e05\u6d17\u3001\u76f8\u4f3c\u5ea6\u8ba1\u7b97\u53ca\u8c31\u5e93\u5339\u914d\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000Python \u7ec4\u4ef6\u7075\u6d3b\uff0c\u4fbf\u4e8e\u81ea\u5efa\u8fc7\u6ee4\u53ca\u5339\u914d\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u8c31\u56fe\u9884\u5904\u7406\u548c\u5339\u914d\u6253\u5206\u4f1a\u6539\u53d8\u7ed3\u679c\uff0c\u5168\u5bf9\u5168\u6bd4\u8f83\u4ee3\u4ef7\u9ad8<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u8c31\u5e93\u4e0e\u6d77\u91cf\u67e5\u8be2\uff0c\u5c24\u5176\u5168\u5bf9\u5168\u76f8\u4f3c\u5ea6\u8ba1\u7b97<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/matchms\/matchms\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<details id=\"field-15\" style=\"margin:18px 0;border-top:1px solid #c9d7df;padding-top:6px\">\n<summary style=\"font-size:1.24em;font-weight:700;cursor:pointer;color:#164b68\">\u80bf\u7624\u57fa\u56e0\u7ec4\u3001\u514d\u75ab\u7ec4\u5e93\u4e0e\u9ad8\u901a\u91cf\u7b5b\u9009\uff08281\u2013300\uff09<\/summary>\n<p>\u80bf\u7624\u5206\u6790\u5148\u6838\u5bf9\u914d\u5bf9\u6b63\u5e38\u6837\u672c\u3001\u80bf\u7624\u7eaf\u5ea6\u53ca\u62f7\u8d1d\u6570\u80cc\u666f\u3002\u514d\u75ab\u7ec4\u5e93\u6ce8\u610f\u514b\u9686\u578b\u5b9a\u4e49\u4e0e\u6d4b\u5e8f\u8986\u76d6\u3002\u7b5b\u9009\u6570\u636e\u4fdd\u7559\u5bf9\u7167\u3001\u91cd\u590d\u548c\u5404\u5411\u5bfc\u7684\u539f\u59cb\u8ba1\u6570\uff0c\u907f\u514d\u628a\u4e00\u4e2a\u5411\u5bfc\u7684\u5f02\u5e38\u5f53\u4f5c\u6574\u4e2a\u57fa\u56e0\u7684\u7a33\u5b9a\u6548\u5e94\u3002<\/p>\n<section class=\"catalog-tool\" data-tool=\"281\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">281\u3000CNVkit<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u9776\u5411\u6216\u5168\u57fa\u56e0\u7ec4\u6d4b\u5e8f\u4f30\u8ba1\u5206\u6bb5\u62f7\u8d1d\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ed3\u5408\u9776\u5185\u4e0e\u9776\u5916\u533a\u57df\uff0c\u8f93\u51fa\u6613\u4e8e\u6838\u67e5\u7684\u5206\u6bb5\u56fe<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6b63\u5e38\u53c2\u8003\u3001\u6355\u83b7\u63a2\u9488\u548c\u80bf\u7624\u7eaf\u5ea6\u4f1a\u5f71\u54cd\u62f7\u8d1d\u6570\u89e3\u91ca<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001BAM \u8bfb\u76d8\u3002\u5927\u9762\u677f\u6279\u6b21\u3001\u5168\u57fa\u56e0\u7ec4\u6216\u53cd\u590d\u91cd\u5efa\u53c2\u8003<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/cnvkit.readthedocs.io\/en\/stable\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"282\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">282\u3000FACETS<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u80bf\u7624\u2013\u6b63\u5e38\u914d\u5bf9\u63a8\u65ad\u7eaf\u5ea6\u3001\u500d\u6027\u53ca\u7b49\u4f4d\u7279\u5f02\u62f7\u8d1d\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u6574\u5408\u603b\u6df1\u5ea6\u4e0e\u7b49\u4f4d\u4e0d\u5e73\u8861\uff0c\u53ef\u5206\u6790\u6742\u5408\u6027\u4e22\u5931<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7eaf\u5ea6\u4f4e\u3001\u8986\u76d6\u7a00\u758f\u6216\u6742\u5408\u4f4d\u70b9\u4e0d\u8db3\u65f6\u89e3\u4e0d\u7a33\u5b9a<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001pileup \u8bfb\u5199\u3002\u524d\u7f6e\u626b\u63cf\u5927\u91cf\u914d\u5bf9 BAM \u6bd4\u5355\u4f8b\u5206\u6bb5\u66f4\u8017\u65f6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/mskcc\/facets\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"283\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">283\u3000ASCAT<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u80bf\u7624\u6570\u636e\u4f30\u8ba1\u7eaf\u5ea6\u3001\u500d\u6027\u4e0e\u7b49\u4f4d\u7279\u5f02\u62f7\u8d1d\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u6821\u6b63\u6b63\u5e38\u7ec6\u80de\u6df7\u5408\uff0c\u9002\u5408\u6bd4\u8f83\u961f\u5217\u4e2d\u7684\u62f7\u8d1d\u6570\u4e8b\u4ef6<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u591a\u4e2a\u7eaf\u5ea6\u2013\u500d\u6027\u89e3\u53ef\u80fd\u76f8\u8fd1\uff0c\u9700\u7ed3\u5408\u8d28\u91cf\u4e0e\u5916\u90e8\u4fe1\u606f<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u961f\u5217 BAM \u9884\u5904\u7406\u548c\u5019\u9009\u62df\u5408\uff0c\u5355\u4f8b\u5206\u6bb5\u8f83\u8f7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/VanLoo-lab\/ascat\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"284\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">284\u3000Sequenza<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u914d\u5bf9\u6d4b\u5e8f\u4f30\u8ba1\u80bf\u7624\u7ec6\u80de\u6bd4\u4f8b\u3001\u500d\u6027\u53ca\u62f7\u8d1d\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u68c0\u67e5\u4e0d\u540c\u7eaf\u5ea6\u4e0e\u500d\u6027\u89e3\u7684\u540e\u9a8c\u652f\u6301<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000GC \u504f\u5dee\u3001\u4f4e\u7eaf\u5ea6\u548c\u6d4b\u5e8f\u8d28\u91cf\u4f1a\u5f71\u54cd\u6700\u4f18\u89e3<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u78c1\u76d8\u3002\u961f\u5217\u5168\u57fa\u56e0\u7ec4 pileup \u4e0e\u6837\u672c\u9884\u5904\u7406<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/sequenzatools.bitbucket.io\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"285\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">285\u3000PureCN<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u9776\u5411\u6216\u5916\u663e\u5b50\u6570\u636e\u4f30\u8ba1\u7eaf\u5ea6\u3001\u500d\u6027\u548c\u7b49\u4f4d\u7279\u5f02\u62f7\u8d1d\u6570\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5728\u5408\u9002\u6b63\u5e38\u53c2\u8003\u96c6\u652f\u6301\u4e0b\u5206\u6790\u4ec5\u80bf\u7624\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9762\u677f\u5339\u914d\u3001\u6837\u672c\u7eaf\u5ea6\u548c\u6b63\u5e38\u5e93\u8d28\u91cf\u5bf9\u7ed3\u679c\u6709\u8f83\u5927\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u9762\u677f\u5efa\u53c2\u8003\u53ca\u5927\u961f\u5217\u5019\u9009\u89e3\u62df\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/PureCN.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"286\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">286\u3000GISTIC2<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u80bf\u7624\u961f\u5217\u5206\u6bb5\u7ed3\u679c\u8bc6\u522b\u663e\u8457\u590d\u53d1\u7684\u6269\u589e\u548c\u7f3a\u5931\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u533a\u5206\u8f83\u5bbd\u548c\u5c40\u7076\u4e8b\u4ef6\uff0c\u5e76\u6c47\u603b\u5019\u9009\u5cf0\u533a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7ed3\u679c\u4f9d\u8d56\u4e0a\u6e38\u5206\u6bb5\u3001\u961f\u5217\u89c4\u6a21\u548c\u53c2\u6570\uff0c\u663e\u8457\u533a\u4e0d\u7b49\u4e8e\u9a71\u52a8\u57fa\u56e0<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5927\u91cf\u80bf\u7624\u6837\u672c\u3001\u5206\u6bb5\u6570\u548c\u591a\u4e9a\u7ec4\u663e\u8457\u6027\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/broadinstitute\/gistic2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"287\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">287\u3000SigProfilerExtractor<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u591a\u6b21\u77e9\u9635\u5206\u89e3\u4ece\u7a81\u53d8\u76ee\u5f55\u63d0\u53d6\u7a81\u53d8\u7279\u5f81\u8c31\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6bd4\u8f83\u4e0d\u540c\u7279\u5f81\u6570\u53ca\u91cd\u91c7\u6837\u7a33\u5b9a\u6027\uff0c\u9002\u5408\u6210\u7ec4\u6837\u672c<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u7a81\u53d8\u6570\u4e0d\u8db3\u6216\u7279\u5f81\u9ad8\u5ea6\u76f8\u4f3c\u65f6\uff0c\u5206\u89e3\u7ed3\u679c\u53ef\u80fd\u4e0d\u552f\u4e00<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU \u6216 GPU\u3002\u5019\u9009\u79e9\u3001\u91cd\u590d\u6b21\u6570\u53ca\u6837\u672c\u6570\u51b3\u5b9a\u8ba1\u7b97\u91cf<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/SigProfilerSuite\/SigProfilerExtractor\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"288\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">288\u3000MutationalPatterns<\/h3>\n<p style=\"margin:3px 0\">\u5728 R \u4e2d\u6784\u5efa\u7a81\u53d8\u8c31\u5e76\u6bd4\u8f83\u3001\u62df\u5408\u5df2\u77e5\u7279\u5f81\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u628a\u6837\u672c\u3001\u7ec4\u522b\u53ca\u57fa\u56e0\u7ec4\u80cc\u666f\u653e\u5728\u540c\u4e00\u5206\u6790\u91cc<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8ba1\u6570\u6837\u672c\u53ca\u76f8\u8fd1\u7279\u5f81\u5bb9\u6613\u8fc7\u62df\u5408\u6216\u8bef\u5206\u914d<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u5e38\u89c4\u5df2\u77e5\u7279\u5f81\u62df\u5408\u8f83\u8f7b<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/MutationalPatterns.html\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"289\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">289\u3000PyClone-VI<\/h3>\n<p style=\"margin:3px 0\">\u7528\u53d8\u5206\u63a8\u65ad\u805a\u7c7b\u4f53\u7ec6\u80de\u7a81\u53d8\u7684\u514b\u9686\u7ec4\u6210\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u8054\u5408\u591a\u4e2a\u53d6\u6837\u90e8\u4f4d\uff0c\u901f\u5ea6\u9002\u5408\u8f83\u5927\u7a81\u53d8\u8868<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u62f7\u8d1d\u6570\u3001\u7eaf\u5ea6\u548c\u66ff\u4ee3\u8bfb\u6bb5\u8ba1\u6570\u8bef\u5dee\u4f1a\u4f20\u9012\u5230\u514b\u9686\u63a8\u65ad<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u591a\u90e8\u4f4d\u3001\u591a\u8d77\u70b9\u53ca\u5927\u91cf\u5019\u9009\u7a81\u53d8<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/Roth-Lab\/pyclone-vi\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"290\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">290\u3000PhyloWGS<\/h3>\n<p style=\"margin:3px 0\">\u7528\u5168\u57fa\u56e0\u7ec4\u7a81\u53d8\u53ca\u62f7\u8d1d\u6570\u4fe1\u606f\u63a8\u65ad\u80bf\u7624\u4e9a\u514b\u9686\u6811\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u8054\u5408\u8003\u8651\u5355\u6838\u82f7\u9178\u53d8\u5f02\u4e0e\u62f7\u8d1d\u6570\u5bf9\u514b\u9686\u9891\u7387\u7684\u5f71\u54cd<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6811\u7a7a\u95f4\u5927\uff0c\u94fe\u6536\u655b\u6162\uff0c\u8f93\u5165\u7a81\u53d8\u6311\u9009\u4f1a\u6539\u53d8\u6811<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u957f\u65f6\u95f4 CPU\u3002\u72ec\u7acb\u94fe\u3001\u591a\u533a\u57df\u6d4b\u5e8f\u53ca\u6a21\u578b\u91cd\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/morrislab\/phylowgs\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"291\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">291\u3000HLA*LA<\/h3>\n<p style=\"margin:3px 0\">\u4ee5\u56fe\u53c2\u8003\u4ece\u6d4b\u5e8f\u8bfb\u6bb5\u63a8\u65ad HLA \u5206\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u5229\u7528 HLA \u533a\u57df\u591a\u6001\u6027\u4e30\u5bcc\u7684\u56fe\u8868\u793a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8986\u76d6\u53ca\u7a00\u6709\u7b49\u4f4d\u57fa\u56e0\u5f71\u54cd\u5206\u578b\u7f6e\u4fe1\u5ea6\uff0c\u53c2\u8003\u6784\u5efa\u5360\u8d44\u6e90<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u7d22\u5f15\u76d8\u3002\u5927\u91cf WGS \u6837\u672c\u4e0e\u56fe\u6bd4\u5bf9<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/DiltheyLab\/HLA-LA\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"292\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">292\u3000OptiType<\/h3>\n<p style=\"margin:3px 0\">\u5229\u7528\u8bfb\u6bb5\u548c\u4f18\u5316\u6a21\u578b\u505a HLA I \u7c7b\u5206\u578b\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8f93\u5165\u53ef\u6765\u81ea DNA \u6216 RNA\uff0c\u9002\u5408\u65e2\u6709 I \u7c7b\u7814\u7a76\u6d41\u7a0b<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9650\u5b9a I \u7c7b\u5e38\u89c1\u5206\u6790\u8303\u56f4\uff0c\u8868\u8fbe\u3001\u8986\u76d6\u548c\u6b67\u4e49\u5339\u914d\u5f71\u54cd\u7ed3\u679c<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3002\u666e\u901a\u5355\u4f8b\u8f83\u8f7b\uff0c\u5927\u578b\u80bf\u7624\u6216\u4eba\u7fa4\u961f\u5217\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/FRED-2\/OptiType\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"293\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">293\u3000CopyKAT<\/h3>\n<p style=\"margin:3px 0\">\u7531\u80bf\u7624\u5355\u7ec6\u80de RNA \u8ba1\u6570\u63a8\u65ad\u5927\u5c3a\u5ea6\u62f7\u8d1d\u6570\u6539\u53d8\u5e76\u8bc6\u522b\u975e\u6574\u500d\u4f53\u7ec6\u80de\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u590d\u7528\u5df2\u6709\u5355\u7ec6\u80de\u8868\u8fbe\u77e9\u9635\uff0c\u6bd4\u8f83\u6837\u672c\u5185\u62f7\u8d1d\u6570\u6a21\u5f0f\u4e0e\u5019\u9009\u4e9a\u514b\u9686<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u9700\u8981\u53ef\u4fe1\u7684\u4e8c\u500d\u4f53\u57fa\u7ebf\uff0c\u8fd1\u4e8c\u500d\u4f53\u80bf\u7624\u53ef\u80fd\u96be\u8bc6\u522b\uff0c\u8868\u8fbe\u63a8\u65ad\u7ed3\u679c\u5b9c\u4e0e DNA \u8bc1\u636e\u6838\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000\u591a\u6838 CPU\u3001\u5185\u5b58\u3002\u5927\u6837\u672c\u7ec6\u80de\u95f4\u8ddd\u79bb\u4e0e\u805a\u7c7b\u5360\u8d44\u6e90\uff0c\u6309\u6837\u672c\u8bd5\u8dd1<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/navinlabcode\/copykat\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"294\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">294\u3000MiXCR<\/h3>\n<p style=\"margin:3px 0\">\u91cd\u5efa\u514d\u75ab\u53d7\u4f53\u514b\u9686\u578b\u5e76\u5206\u6790 BCR\/TCR \u7ec4\u5e93\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u652f\u6301\u591a\u79cd\u5efa\u5e93\u534f\u8bae\uff0c\u80fd\u6309\u9884\u8bbe\u7edf\u4e00\u5904\u7406\u7cfb\u5217\u6279\u6b21<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u534f\u8bae\u3001UMI \u548c\u94fe\u7c7b\u578b\u987b\u8bbe\u5bf9\uff0c\u672c\u5730\u53ca\u5546\u4e1a\u4f7f\u7528\u6838\u5bf9\u8bb8\u53ef<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u4e34\u65f6\u76d8\u3002\u6df1\u5ea6\u7ec4\u5e93\u3001\u591a\u6587\u5e93\u6216\u6301\u7eed\u9001\u6837<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/mixcr.com\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"295\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">295\u3000TRUST4<\/h3>\n<p style=\"margin:3px 0\">\u4ece bulk \u6216\u5355\u7ec6\u80de RNA \u6d4b\u5e8f\u91cd\u5efa TCR\/BCR \u5e8f\u5217\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u6316\u6398\u975e\u4e13\u95e8\u7684 RNA \u6570\u636e\uff0c\u9002\u5408\u56de\u987e\u6027\u5927\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u8868\u8fbe\u7684\u53d7\u4f53\u8bc1\u636e\u5c11\uff0c\u666e\u901a bulk \u6570\u636e\u7f3a\u4e4f\u53ef\u9760\u7684\u5355\u7ec6\u80de\u914d\u5bf9<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001BAM \u8bfb\u76d8\u3002\u5168\u91cf\u91cd\u626b\u5386\u53f2\u8f6c\u5f55\u7ec4\u961f\u5217<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/liulab-dfci\/TRUST4\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"296\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">296\u3000IgBLAST<\/h3>\n<p style=\"margin:3px 0\">\u5bf9\u514d\u75ab\u7403\u86cb\u767d\u6216 TCR \u91cd\u6392\u5e8f\u5217\u505a V(D)J \u6ce8\u91ca\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u62a5\u544a\u57fa\u56e0\u7247\u6bb5\u5339\u914d\u548c\u91cd\u6392\u8fb9\u754c\uff0c\u4fbf\u4e8e\u514b\u9686\u578b\u5206\u6790<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u79cd\u7cfb\u53c2\u8003\u3001\u7269\u79cd\u53ca\u4f53\u7ec6\u80de\u9ad8\u7a81\u53d8\u4f1a\u5f71\u54cd\u7247\u6bb5\u5f52\u5c5e<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u6570\u636e\u5e93\u76d8\u3002\u6570\u767e\u4e07\u6761\u53d7\u4f53\u5e8f\u5217\u672c\u5730\u6279\u91cf\u6ce8\u91ca<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/igblast\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"297\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">297\u3000pVACtools<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u80bf\u7624\u53d8\u5f02\u3001\u8f6c\u5f55\u672c\u7b49\u8f93\u5165\u7b5b\u9009\u5019\u9009\u65b0\u6297\u539f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u7ec4\u5408\u8868\u8fbe\u3001HLA \u4e0e\u591a\u79cd\u7ed3\u5408\u9884\u6d4b\u5668\u5f62\u6210\u5019\u9009\u6392\u5e8f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f9d\u8d56\u5206\u578b\u3001\u53d8\u5f02\u53ca\u5916\u90e8\u9884\u6d4b\u5668\u6388\u6743\uff0c\u5019\u9009\u5448\u9012\u4ecd\u9700\u5b9e\u9a8c\u9a8c\u8bc1<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU \u7b49\u968f\u9884\u6d4b\u5668\u3002\u60a3\u8005\u6570\u3001HLA \u6570\u3001\u80bd\u957f\u5ea6\u53ca\u9884\u6d4b\u5668\u7ec4\u5408<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/pvactools.readthedocs.io\/en\/latest\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"298\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">298\u3000NetMHCpan<\/h3>\n<p style=\"margin:3px 0\">\u9884\u6d4b\u80bd\u6bb5\u4e0e MHC I \u7c7b\u5206\u5b50\u7684\u7ed3\u5408\u6216\u5448\u9012\u503e\u5411\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u8de8\u7b49\u4f4d\u57fa\u56e0\u5efa\u6a21\uff0c\u4fbf\u4e8e\u5bf9\u5019\u9009\u80bd\u6309\u7b49\u4f4d\u57fa\u56e0\u6392\u5e8f<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u4f4e\u4ee3\u8868\u6027\u7b49\u4f4d\u57fa\u56e0\u548c\u771f\u5b9e\u514d\u75ab\u539f\u6027\u9700\u989d\u5916\u9a8c\u8bc1\uff0c\u672c\u5730\u7248\u6709\u8bb8\u53ef\u6761\u4ef6<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3002\u5927\u80bd\u5e93\u3001\u591a\u79cd HLA \u53ca\u5168\u86cb\u767d\u7ec4\u626b\u63cf\u65f6\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/services.healthtech.dtu.dk\/services\/NetMHCpan-4.2\/\">\u9879\u76ee\u8d44\u6599<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"299\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">299\u3000MAGeCK<\/h3>\n<p style=\"margin:3px 0\">\u4ece CRISPR \u7b5b\u9009\u8bfb\u6570\u8bc6\u522b\u5bcc\u96c6\u6216\u8017\u7aed\u7684\u9776\u57fa\u56e0\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u80fd\u6574\u5408\u591a\u6761 sgRNA\uff0c\u652f\u6301\u91cd\u590d\u53ca\u5b9e\u9a8c\u6761\u4ef6\u6bd4\u8f83<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6587\u5e93\u8986\u76d6\u3001\u5bf9\u7167\u8bbe\u8ba1\u53ca\u62f7\u8d1d\u6570\u6548\u5e94\u4f1a\u5f71\u54cd\u547d\u4e2d\u5217\u8868<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u8bfb\u76d8\u3002\u5355\u5f20\u8ba1\u6570\u77e9\u9635\u8f83\u8f7b\uff0c\u539f\u59cb\u8bfb\u6bb5\u6216\u591a\u8f6e\u7b5b\u9009\u624d\u653e\u5927<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/liulab-dfci\/MAGeCK\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<section class=\"catalog-tool\" data-tool=\"300\" style=\"margin:15px 0 23px\">\n<h3 style=\"font-size:1.1em;line-height:1.45;margin:0 0 5px\">300\u3000CRISPResso2<\/h3>\n<p style=\"margin:3px 0\">\u4ece\u6269\u589e\u5b50\u7b49\u6d4b\u5e8f\u6570\u636e\u91cf\u5316\u57fa\u56e0\u7f16\u8f91\u548c\u63d2\u7f3a\u6a21\u5f0f\u3002<\/p>\n<p style=\"margin:2px 0\"><strong>\u4f18\u52bf<\/strong>\u3000\u53ef\u9488\u5bf9\u591a\u4f4d\u70b9\u3001\u78b1\u57fa\u7f16\u8f91\u7b49\u60c5\u5f62\u8f93\u51fa\u7edf\u4e00\u62a5\u544a<\/p>\n<p style=\"margin:2px 0\"><strong>\u5c40\u9650<\/strong>\u3000\u6269\u589e\u504f\u597d\u3001\u6bd4\u5bf9\u7a97\u53e3\u53ca\u53c2\u8003\u8bbe\u8ba1\u4f1a\u5f71\u54cd\u7f16\u8f91\u7387<\/p>\n<p style=\"margin:2px 0\"><strong>\u8ba1\u7b97\u91cf<\/strong>\u3000CPU\u3001\u5185\u5b58\u3001\u8bfb\u5199\u3002\u6210\u6279\u6269\u589e\u5b50\u3001\u6df1\u5ea6\u7b5b\u9009\u548c\u591a\u4e2a\u7f16\u8f91\u6761\u4ef6<\/p>\n<p style=\"margin:2px 0\"><a href=\"https:\/\/github.com\/pinellolab\/CRISPResso2\">\u9879\u76ee\u4ed3\u5e93<\/a><\/p>\n<\/section>\n<\/details>\n<div class=\"catalog-ending\">\n<p>\u786e\u5b9a\u9002\u5408\u7684\u5de5\u5177\u540e\uff0c\u5982\u679c\u9700\u8981\u6279\u91cf\u5904\u7406\u5168\u57fa\u56e0\u7ec4\u3001\u7ec4\u5b66\u56fe\u8c31\u6216\u7ed3\u6784\u9884\u6d4b\u4efb\u52a1\uff0c\u53ef\u4e86\u89e3<a href=\"https:\/\/www.biocloudservice.com\/wordpress\/compute-services\/shared-research-workspace\/\">\u4e91\u751f\u4fe1\u7684\u751f\u7269\u4fe1\u606f\u5206\u6790\u670d\u52a1\u5668<\/a>\u3002<\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"<p>\u6309 15 \u4e2a\u7814\u7a76\u65b9\u5411\u6bd4\u8f83 300 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